Charadrius vociferus (killdeer): 104289572
Help
Entry
104289572 CDS
T08577
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03440
Homologous recombination
cvf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104289572 (TOP3A)
03460 Fanconi anemia pathway
104289572 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvf03032
]
104289572 (TOP3A)
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104289572 (TOP3A)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104289572 (TOP3A)
DNA replication proteins [BR:
cvf03032
]
Eukaryotic type
DNA Topoisomerases
104289572 (TOP3A)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104289572 (TOP3A)
FA (Fanconi anemia) pathway
104289572 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
104289572
NCBI-ProteinID:
XP_009886830
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MNFQARVFASCRVRMLPQPWRLFSRAADDMALQRIRKVLCVAEKNDAARGIADLLSNSRM
RRREGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKLPFRKWHSCNPLALFDAEI
EKYCPENYMDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARF
SEITLHAVRTACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILSDQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVVFNWKRNRLFNHTACLV
LYQMCMEDPMATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQG
FISYPRTETNIFPKELNLSALVQQQTQDPNWGAFAQRILDQGGPTPRSGTKSDQAHPPIH
PTKYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFIAQGLMILARNYL
EVYPYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATH
AEHIETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKSAVLQQQVQKYKQVFIEAVARANKLDQALAQYFGEATEIVEQEEVYPAMPVSVRKC
PQCNNDMVLKTKKNGGFYLSCTGYPACKTAVWFPDFVLDVARDESVCAVCKPHPVHRLKF
KFKRGSVPPVMPLEFVGCIGGCDEMLKELLDLKYLHRSSQPASSASQQANHLQVNNSFNR
PSGESRHVRGTTNLAPGHLLSLSSTRTPRPVAFAAPDDGNNAVMCNCGNEALLLTVRKEG
PNQGRQFYKCSASTCNFFLWADQQLEDRSNTAPRGSALPQPFAGRGPAGFQRPGGRRGPE
LFESNSSDAGGGTVCNCDQPAVMRTVQKDGPNKGRQFHTCSKPREQQCGFFQWADENVAP
GPSGDVSLNHFGSSGYSREVGSKAKRPSGPSSEATAKKPRTCSICHQPGHTRKTCPQNH
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaactttcaagccagggtttttgctagctgcagggtcaggatgctgccgcagccctgg
cgtctgttttcccgggctgcggatgatatggcattgcagaggatccggaaggtcctgtgc
gtggctgagaagaacgatgctgcccgaggaattgcagatctgctctccaacagcagaatg
cgacggcgagaagggttttccaagttcaacaagatctatgagtacgactaccagatgttt
ggccagaacgttactatggtgatgacatccgtgtcaggacacttactggctcacgatttt
aagctgccatttcgcaaatggcatagctgcaaccctctggctctttttgatgctgaaatc
gagaagtattgccctgaaaattacatggatatcaagagaacccttgaacgagaagtccag
cagtgccaagctctggtgatctggactgactgtgatcgagaaggagagaatattggcttt
gagataattcacgtttgcaaagctgtaaagccaaacctccaggttttccgagcccgtttt
tcagagattactcttcatgctgtcagaactgcctgcgagaacctcacccaaccagatcaa
aaaacgagtgatgccgttgatgtcaggcaggagctggacctcaggattggtgctgccttc
accagattccagacactgaggctccggaagatcttccctgatattttatcggatcagctg
atcagctatggtagctgccagttcccaacactggggtttgtagttgaacgctttaaagcc
atccaggcctttgttcctgaagccttctataaaataaaagtgacacatgatcatgaagat
ggcagtgtggtcttcaactggaagaggaaccggctctttaatcacacggcgtgcctggtc
ctttaccagatgtgtatggaggatccaatggcaactgttgttgaggttgggagcaagcca
aaaagcaagtggaggcccctgcccctggacactgtggaacttgagaagttggcttcccgc
aaactgaaaataaacgcaaaggaaaccatgagaatagcagaaaaactctatactcaaggg
ttcattagctacccccgaacagagaccaatattttccccaaggaactgaacctctctgcc
ttagtacaacagcaaacacaggacccaaactggggagcgtttgcacagaggattttggat
cagggtgggccaacccctcggagcggaaccaaatcagatcaggctcaccctcccattcac
cccacaaaatacactgctaacctgcagggcaatgagcagagactatatgagttcatcgtg
cgccattttttggcttgctgctctcaagatgccaagggacaggaaacaactgtggagatc
gacatcgctaatgaacgattcattgctcaaggactaatgatcctggcccgaaattatctg
gaagtctatccttacgagaagtggagcgataaggttatcccactgtatcagaaagggtct
cgctttcagcccactacagtggagatggtggatggggaaaccagccctccattgctcctc
acagaagcggatctgattgctctcatggagaaacatggcattgggactgatgccacccat
gccgagcatattgagacgattaaaacacggatgtacgtgggccttacagcagatcagcgg
ttcctcccaggtcacctaggcatggggctggttgaaggctatgattccatgggctacgag
atgtccaagcctgaccttcgagctgaactggaagccgatctgaaactgatctgtgaaggg
aagaaagacaaatctgcagtgttgcagcagcaggtccaaaagtacaagcaagtcttcatt
gaagctgtggccagagccaacaagttggaccaggccctggctcagtattttggagaagcc
acagaaattgtggagcaagaggaggtctacccggcaatgcccgtttctgttcggaagtgt
ccacagtgcaacaacgacatggtcctgaagaccaagaagaacggcgggttctatctcagc
tgcacgggctatccagcttgtaaaactgcagtctggtttcctgatttcgtgctggatgtg
gccagggacgagagcgtctgtgctgtgtgtaaaccacatccagttcacagactgaagttt
aagttcaagaggggcagtgttccacccgtgatgcccctggagtttgttggttgcatcgga
ggctgtgatgagatgctaaaagagctcttggacctgaagtatttgcacaggtcgtcccag
cccgcatcatcagccagccagcaggctaatcacttgcaggtcaacaactccttcaacaga
cctagtggtgaaagcaggcacgtgagggggaccacaaacctggcaccaggacatctactg
tccttgagctcaacgagaacacccaggcctgttgcttttgctgctccagatgatgggaac
aacgcagtgatgtgcaactgtgggaatgaagctctgctgttaactgtgcgcaaagaaggg
ccaaatcaaggcaggcagttttacaaatgcagcgccagtacctgcaacttttttctctgg
gccgatcagcagttagaggacagaagcaataccgctccacggggctctgcgctgccccag
ccctttgcaggaaggggcccagcaggatttcagcgcccaggaggaaggagaggcccagag
ctctttgaaagcaacagttctgatgcaggaggtggcacggtctgcaactgcgaccagcca
gccgtcatgcgcactgtccaaaaggacgggcccaacaaagggcggcagttccacacctgc
tctaaaccccgagagcagcagtgcggcttcttccagtgggcagatgaaaacgtggcacca
gggccttctggagatgtctctttgaaccacttcggcagcagtggatactcaagagaggtg
ggaagtaaagccaagcgaccaagcggtccctcctcagaagccactgccaagaaaccacgg
acctgtagcatttgccaccagcctggccacaccaggaaaacctgccctcaaaaccactga
DBGET
integrated database retrieval system
