Charadrius vociferus (killdeer): 104289663
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Entry
104289663 CDS
T08577
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
104289663 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvf04040
]
104289663 (KCNMA1)
Ion channels [BR:
cvf04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
104289663 (KCNMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
104289663
NCBI-ProteinID:
XP_009886935
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGL
FIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGACKPTDEKEENVAAEVGWMTS
VKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAF
NVFFLLYFGLRFIIANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQ
FSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNNQPLTYWE
CVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSY
SAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFT
QVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRI
ITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAPGLSTMLANLFSMRSF
IKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELVFAKLKLLMIAIEYKSEKRE
SSILINPGNHVKIQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRPKMS
IYKRMKLACCFDCGRSERDCSCMSGSVHSNMDTLERAFPLSSVSVNDCSTSLRAFEDEQP
STLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQIDNMDANVKKYDSTGMFHWCPAK
DIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNFHYHELKHIVFVG
SLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDK
ECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLLRQPSITTGANIPI
ITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIR
TLVTGGATPELEALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGD
LFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHN
AGQSRASLSHSSHSSYSSSKKSSSVHSIPSTANRPNRTKTRDSREKQNATRMNRMGQEKK
WFTDEPDNAYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaat
gtgcccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgc
ggacagcgcatgtggtgggctttcctcgcctcatccatggtcactttctttgggggactg
tttatcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgccactgcggg
gtcaaaaacaaggaggcccagaagatcaacggtggtggagatacacaggcagatggggcc
tgcaaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacctcc
gtgaaggattgggcaggagtcatgatatctgcccagacattaactggcagagtacttgtt
gtcttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcgtcaaac
ccaatagaatcctgccagaatttctacaaagatttcacattacagatcgacatggctttc
aatgtgttcttcctactctacttcggcttgcgtttcataatagccaatgacaagctatgg
ttttggctagaagttaactcagtagtagatttcttcacggtccctccagtgtttgtgtca
gtctatttaaacagaagttggcttggtttaagatttttaagagcccttagactgatacag
ttttcagaaattttgcagtttctgaatatccttaaaacaagtaattccatcaagctagtg
aatctgtgctctatatttatcagcacgtggctgacagcagctgggttcatacatttggtg
gagaactcaggggatccatgggaaaatttccaaaataatcaaccgctaacatattgggaa
tgtgtttatttactgatggttacaatgtccactgttggttatggagatgtttatgcaaaa
acaacccttggtcgccttttcatggtcttcttcatccttgggggattggccatgtttgcc
agctacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctat
agtgcggttagtggaagaaagcacatagttgtctgtggtcacataacacttgaaagcgtg
tccaacttcctgaaggacttcctgcacaaggatagggatgatgtcaacgtagaaatcgtc
tttctgcataatatctcccctaaccttgagctggaagctctttttaaacgacacttcact
caggtggaattttatcagggttcagtccttaatccccatgacctggcaagagtgaagata
gagtcagcagatgcgtgcctaatccttgcaaataaatattgcgctgacccagatgcagaa
gatgcctccaatattatgagagttatttcaataaagaattatcatccgaagataagaatt
atcactcagatgttgcagtatcacaataaggctcatctgctaaatatcccaagctggaac
tggaaagaaggggatgatgcaatctgtcttgctgagctcaagctgggtttcatagcccag
agctgcctggcaccaggcctttcaacaatgttagccaacctcttctctatgaggtcattc
ataaagattgaggaggatacgtggcagaaatactacctggaaggtgttgcaaatgaaatg
tatacagaatatctgtctagtgcctttgtgggtttgtccttccctgcagtttgtgaactg
gtgtttgcgaaactaaagctcttaatgatagccatagaatacaagtcggaaaaacgagaa
agcagtatattaatcaatcctggaaaccatgtcaagattcaagaaggtactttaggattc
ttcattgcaagtgatgccaaagaagtaaaaagggcatttttttactgcaaggcctgtcat
gatgacatcacggatcccaaaagaataaaaaaatgtggctgcaaacggcccaagatgtcc
atctacaagagaatgaaactggcatgttgttttgattgcggacgctctgagcgtgactgc
tcttgcatgtcaggcagtgtacatagtaacatggacacccttgagagagccttcccactt
tcttctgtctctgttaatgattgctccaccagtttacgtgcctttgaagatgagcagccg
tcgacactgtcacccaaaaaaaagcagcgaaacggaggcatgcgaaattcacccaactcc
tcacccaaactgatgaggcatgaccccttgttaattcctggcaacgagcagattgacaat
atggatgccaatgtgaaaaagtatgactctacagggatgtttcattggtgtccagccaag
gacatcgaaaaggtcattttgactcgaagtgaagcagcgatgacagttttaagtgggcat
gtagtcgtttgcatatttggggatgttaaatctgctttgattggactaagaaatttagtg
atgccattacgagccagcaactttcactaccatgaactcaagcacattgtgtttgtgggt
tcacttgaatacctgagaagggaatgggagacactgcataacttccccaaggtttcaatc
ttgcctggtacgccattaagtcgggctgatttaagggctgtcaacatcaacctctgcgac
atgtgcgttatcctgtcagccaatcagaataatattgatgatgcttcgctgcaggacaag
gaatgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagcattggggtc
ttgcaggctaattcccaaggctttacaccccctgggatggataggtcatctccagacaac
agtccagtccatggcctgctacgtcaaccctccattacaacaggagccaacatccctatt
ataacagagctagtaaatgattcaaatgttcagttcttggaccaagatgatgatgatgat
ccagacacagaactgtatctgacacagccctttgcatgtggaactgcatttgctgtcagc
gtgctggactctctcatgagcgcaacatacttcaatgacaatatcctcacactgatacgg
acattggtaactggaggagccacaccagagctggaagcactgattgctgaggaaaatgca
ttgagaggaggttacagcacgccccagacacttgcaaacagggacaggtgtcgagttgct
cagttggctttgtatgatgggccctttgcagacctaggggatggaggttgttatggagat
ctattttgtaaagcactgaaaacatacaatatgctttgctttggaatttatcgattaagg
gatgcacatctaagtactcccagccaatgcactaaacgttatgttatcacaaacccaccc
tatgaatttgagctcgtgccgacagacttgatcttctgtttgatgcaatttgaccacaac
gctggccagtcccgggccagtctttctcattcctcccattcctcctattcttccagtaag
aagagctcatcagttcactccatcccttcaacagcaaaccgaccgaaccgcaccaagacc
agggattcccgggaaaaacagaatgcaacaaggatgaatagaatgggccaagaaaagaaa
tggtttacagatgagccggataatgcctatcccagaaacattcaaatcaagcccatgagc
actcacatggccaatcagatcaatcaatataaatcaacaagcagcttgataccaccaatc
agagaagttgaagatgaatgttga
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