Charadrius vociferus (killdeer): 104289702
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Entry
104289702 CDS
T08577
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104289702 (TNRC6C)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104289702 (TNRC6C)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104289702 (TNRC6C)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104289702 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
104289702
NCBI-ProteinID:
XP_009886994
LinkDB
All DBs
Position
Unknown
AA seq
1799 aa
AA seq
DB search
MVGRLLSSDLSHSGLGDHYENSHWGQQPAFRSEGNCSWDKVIIDRTDKEAWPSITGAETE
SASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGANGALVQSTSNQSALGA
GGANGNGNSARVWGVAGGSSSGLAHCSASGGDGKMDNMMGDGRSQNCWGASNSNAGINLN
LNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQES
TEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIP
PHLQGLPGANGTSVSQVSGGSGEGMGSSVWGMSPGNPATGNSNSGFSQGNGDTVNSALSA
KQNGSSSAVQKEGNGASAWDSGPPSGPGVLAWGRGGGNGGVGSMHSGAWGHPNRNASNGV
NGEWGKPPNQHSNSDINGKGSTGWDSSSVTSPNPAMQQGNEQINSWAKAAASGTTASEGS
NDSGGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTA
WEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSVSGWVNSPPAAVPT
NTGWGDNSNKAPNGPGGWGESASSTTVNNAAAAKSGHAWSGTANQEDKSPTWGEPQKPKS
QNWGDGQKSNPSWTSGGGDWTDSSSVPGHLGDGKKNGSGWDSDNRSGSGWNDSTRSGTSG
WGNGTNSKANTGTSWGESLKPGPQQNWANKPQDNNVSNWGGAASVKQTGSGWVGGPVPAK
QKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPIIQSSTTTNT
TTTSTIINTSMVEPQPSHQSSAQPNRSPLLGPGWGEMPTVHTKTEASWGEPSSPSAAVDN
GTSAWGKPPSSGTGWGDNPAEAAGTYGRTNAPAAAPALCKPASKSMQEGWGSGGDEVNLS
TSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQLTD
MGFPREPAEEALKSNNMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPISK
ESSMDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQNLNSS
RQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFA
AKNIGLSPAQLTSPINNPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQ
VARTINNMQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHPQAPGLPDL
QTKEQQSSPNTFAPYPLAGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWTHPNSMDNLS
SAASSLDQNSSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNSESPASPPVAVPHSWSRA
KTDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRY
LLKSGGSSPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKSTWSSGPIS
HTQASLSHELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSAWSTDSSGR
TSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHM
CVLGNTTILAEFAGEEEVNRFLAQGQPLPPTSSWQSNTGTNQTRLGSSGSSHGLVRADAG
HWNPPCLGGKGSSDLLWGGVPQYSSSLWGPPSADDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atggttgggcggctcctttcttcagatctcagccacagtggattgggagaccattatgag
aattcccactggggacagcagcccgctttcaggagtgaaggcaactgcagctgggataaa
gtgataatagacaggactgacaaggaagcgtggccttccattaccggagccgagactgag
tctgcctcagaatgtactacagacactgactctgcctccaactgtggctcagagaacagt
agcatggctacagggagtgcccaaggcaacttcactggacatacaaagaaaactaatggc
aataatggcgccaacggagcactcgtccaaagcacttctaaccagagtgcccttggagct
ggtggagcaaacggtaacggcaactcggccagagtgtggggggtggctgggggctccagc
tctggcctagcccactgctctgccagtggcggggatggaaagatggacaacatgatggga
gatggtagaagtcagaactgctggggtgcttccaactcgaatgctggcattaatcttaac
cttaaccctaatgccaatccggctgcctggcctgtacttggacatgaaggaactgtggga
gcaggcaacccttccagtatttgcagtccagtcagtgccataggtcagaacatgggcaac
cagaatgggaacccaacgggcaccttgggtgcttggggaaacttgctgccgcaagagagc
acagaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaacctt
aacactgatggaccaaataacactaaccccatgaactcttcaccaaaccctatcaatgca
atgcagacaaacggactgccgaactgggggatggctgttggtatgggggccatcatcccg
ccccacctgcaaggccttcctggtgctaacggaacatcggtttctcaagtcagcgggggc
agtggtgaaggaatgggcagttcagtgtgggggatgtccccaggtaatcctgccacagga
aacagcaattctgggttcagtcaggggaatggagacactgtgaactcagcattaagtgct
aaacaaaatggatccagcagtgctgtgcaaaaggaaggaaacggagcgagcgcgtgggat
tcggggcctccttctggtcccggggtactagcgtggggcaggggcggtggcaatggcggc
gtcggtagtatgcattctggagcttggggccaccccaaccggaacgccagtaacggtgtg
aacggtgaatggggcaagcccccaaaccagcattccaatagcgacatcaatgggaaagga
tcaacagggtgggatagctctagtgttaccagtccgaatcctgccatgcagcagggcaat
gaacaaattaactcttgggccaaagctgcagcgtccggcaccacagctagcgaaggaagc
aacgacagcggtggcagtcaaaatgaaggcagtactgggagggagggggctggagagggc
aggaggagagacaaagggatgatagaccaagggcaagttcagttgccaagaaatgacctt
gaccccagggtcctgtccaatacggggtggggacagacccctgtaaagcaaaacactgcc
tgggaatttgaagagtccccaaggtctgaacgaaagaatgacaatggaacagaggcctgg
ggttgtgcagctactcaatcttcaaactcaggggggaagaacgatgggtccatcatgaac
agtacaaatacctcttcagtatctgggtgggtcaactctccgccggcagctgttccaaca
aatacaggttggggagacaatagcaacaaagcaccaaatggcccaggggggtggggagag
tcagcaagctctactactgttaataatgctgctgctgccaaaagcggccacgcttggagt
gggaccgcgaatcaggaggacaaatcacctacctggggtgaacctcagaaacccaaatct
caaaactggggagatggacagaaatcaaatccaagctggacttcaggaggcggagattgg
acagattcatcgtctgttcctggacacttgggtgatgggaagaagaatggatctggatgg
gattctgacaatagatcagggtctggctggaatgattccacaaggtctgggaccagtggt
tggggaaatggcacaaacagcaaggctaatacaggtacaagttggggggaatctttgaag
ccgggcccccaacaaaattgggctaataaaccccaggacaacaatgtgagtaactggggg
ggagctgcttctgtaaaacagacggggtcagggtgggttggtgggccagtgccagccaaa
caaaaagagaactgtgaggcaactggctgggaagagccgtctccaccgtccattcgccgc
aagatggaaatcgatgatggtacctcagcttggggcgacccaaattacaacaacaacaag
actgtaaacatgtgggatagaaataatcctatcattcagagcagtaccacaaccaatacc
accaccactagcaccattatcaacacaagtatggttgaacctcagccatcgcaccagtca
agtgcccagccgaaccggtccccgctgcttggtccaggctggggagaaatgcctactgtc
cacacaaagaccgaagcttcttggggagagccgtcgtccccttctgctgcagttgataat
ggcacttcagcgtgggggaaaccccccagcagtggtacagggtggggagataatcctgcc
gaggcggcagggacatacggaagaacaaacgctccagctgctgccccagcactgtgcaaa
ccagcttcaaaatctatgcaagaaggctggggcagtggtggggatgaagtgaatctcagt
acgagtcagtgggaagatgaagaaggagatatgtggaataatactgcttcacaagagagc
agctcctcctgtaattcctgggggaacgccccgaagaaaggacttcaaaagggcatgaag
acatctagcaagcaagatgaggcctggatcatgaaccgtctgataaaacagctcacagac
atgggcttccctagagagccagcggaagaggccttgaagagcaacaatatgaatctcgat
caggccatgagtgctctgctggaaaagaaggtggaaatggacaagcgtggaatgggagtg
accgactataatggaatggtcaccaaaccccttggctgccgcccaccaccaatctccaaa
gagtcttccatggaccgccccaccttccttgacaaggatggcggcctagtggaagagccc
actacttcaccatttttgccttcaccaagcctgaagctccccctttcaaacagtgcactc
cctaatcagaccctgggcgggattgcctcggggctgggcatgcaaaacttgaattcttct
agacagataccgagtggcaatctgggtatgtttggcaatagcggagcagcacaagccagg
accatgcaacagccgcagcaaccgccagtgcaacctcttaattcatcccagcctagtctt
cgtgctcaagtgcctcagtttctatcccctcaggttcaagcacagcttttgcagtttgca
gcaaaaaacattggtctcagccctgcacagttaacctcgccaattaataatcctcagcat
atgacgatgttgaaccagctctatcagctgcagctggcgtaccaacgtttacaaatccag
cagcagatgttacaggctcagcgtaatgtttccggacccatgagacaacaggagcagcaa
gttgcacgtacaatcaataacatgcagcagcagatccagcagcaccagcgccagctggcc
caggccctgcttatgaagcagcagcctccccctccacatctatctttgcacccctctgca
ggcaaatcagccatggatagcttttcaccccatccccaggctcccggcctacctgacctg
cagaccaaagagcaacagtcttcaccgaacacctttgctccttaccctcttgctggactg
aacccgaacatgaatgtaaataacatggacattactggtggtttgtcagtgaaggacact
tctcagtcccagtctcgccttcctcagtggacacaccccaactcaatggataatctgtct
agtgctgcttcttcacttgaccagaactccagcaagcacggtgctatacctggaggttta
agtattggtcctccaggaaagtcctccattgatgactcttatggccggtatgatctgatt
caaaacagtgaatcgcccgccagtccacccgtagctgttcctcacagctggtcacgtgcc
aaaaccgatagtgataaaatttccaatggctccagcataaactggccaccagagtttcat
ccaggagtgccatggaaaggactgcagaatattgatcctgaaaatgaccctgatgttact
cctggaagtgttccaactggccctaccataaacaccacgatacaggatgttaatcgctat
cttctcaagagtggagggtcatccccaacatcatctcagaatgccacgctgccttcatcg
agtgcctggccgcttagtgcctccggctacagtagctctttcagcagcattgcatccgca
cctagcattgcaggtaaattgtcagacatcaagtctacatggtcctctggcccaatctct
cacacgcaagcctctctatcccacgaactctggaaggtacccagaaacactactgctcct
acgagaccacctccgggcttaacaaacaccaagccatcatctacgtggggtgccagtccc
ctgggttggaccagctcttactcctccggttctgcatggagtactgacagctcagggaga
acaagcagctggctggttcttcgaaacctcacaccccagattgatggttccacactgcgg
acgttgtgtttgcaacacggccctctgataacattccacttgaacctgacgcaagggaat
gctgtggtccgatacagttccaaggaagaagcagccaaggcccaaaagtctctgcatatg
tgcgtcctgggaaacactaccatcctggccgagttcgctggtgaagaagaagtcaaccgt
ttcttagcacaaggccagccgctgccgcccacctccagctggcagtccaacactggaacc
aaccagacccgcctgggctcctccggcagctctcacggcttggtgcgcgccgacgccggc
cactggaaccccccctgcctggggggcaagggcagcagcgacctgctctggggtggggtg
ccccagtactccagcagcctttggggacccccgagcgccgacgacggcagagttatcgga
agcccgacacctttgaatactcttcttccgggtgatcttctcagtggggagtccatctag
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integrated database retrieval system
