Charadrius vociferus (killdeer): 104289800
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Entry
104289800 CDS
T08577
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104289800 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104289800 (ERCC6)
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104289800 (ERCC6)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104289800 (ERCC6)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104289800 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104289800
NCBI-ProteinID:
XP_009887114
LinkDB
All DBs
Position
Unknown
AA seq
1497 aa
AA seq
DB search
MPTDNSHLPDSIQEQDPVTTSSNNGLHNAEELGTEQENDICDSDLDNSITVPNSASQPSS
SMAVPLEVPRRGQPLLQINRQQIQSISCSAQAAELKGLGVDVYDQDVLEQGVLQQVDNAI
NEANKATKIADAEKEYQSVLDDIRSCTTSLKQINKIIEQLSPQAADNKDINRKLDSVKRQ
KYNKEQQLKKIKAKQKRLQAILGGTDILDKVNEIEFEEDEEPGPSCLGSMLMPVQETEWD
ELIRTGQMTPFGTKIPQKPEKKTRRLMLNDTSDFEKYLADQDKLLSERKKLSLHKGAKKK
AQAKNVQCIAPTSTTREKRGKALSKTDKRLKKHLRKLQKHALQIKSKAEIPKEKKYLEDK
KVRREQEDDSGESEYVPDEELFDPEAAEEEEEQAENYSDYELGNLSSKKKYSVKRDFKEA
EDDADFFPSSEEEEHTLGKRKVKRWRDDGDEDYYKQRLRRWQKERLKDKEHQTAEEISEE
SDTEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAG
LSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKELHTWWPPFRVAILHETGSYTDKKA
KLIREIVSCHGILITSYSYIRLMQDVIHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTP
HRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAY
KCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFINSKEVYQI
LNGDMQIFSGLVSLRKICNHPDLFSGGPRILKGVPDAEVEEADQFGYWKRSGKMIVVESL
LKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLITRYNEDKSI
FIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGT
IEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDVSQGTETSAIFAGTGS
DVQVPKHQFKRKLEKPPDSDTSKGDLCLPEGSSPKRSKSSNSYSTTHLTNSSSKAIETNE
ETKRNLETFDQNSYAKDNVQAATNTNSLNTSKEEGLERADKSVSQSLPGDAGSSENAKCL
NTVVADEVHGACSANVQGDFSLTCGAAGSWEKQVAKTEDGQLDNNHYKRTSKTKHRVDVL
SNESHKDKSKKKHHKDAKFEGERIPHLVKQKRYRKENSEEKEEDSQKNDDYVLEKLFKKS
AGVHSVMKHDVIMEASSADHVLVEAEANRVAQDALRALKVSRQRCLGAASGVPTWTGMSG
LSGAPSGIKSRFGQKRNSMLLSSHSTCAPPAKKCKDADTIKKENVKKCSSNGHFDGKSGE
SSSSALDSSSLLAKMRARNHLILPQRTGDEGDENHQQAPAPALASTEYDELLVDVRNFIA
FQARVDGEASTQEILQEFESKLPVAQSCVFRELLRNLCTFHRSPNGEGVWRLKPEFH
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagacaacagccacctgccagacagtatccaagaacaagatcctgttactact
tcaagcaataatggcctgcataatgcagaggaattgggaacggaacaagaaaatgacatt
tgtgacagtgacctggataatagtattacagttcctaactctgccagccagccatcatct
tccatggcggttcctttggaggtgcccagaagaggacaaccccttttacagatcaacagg
cagcagattcagtccatctcatgtagtgcacaggctgctgagctcaaaggtttaggagtt
gatgtctatgaccaggatgtattggagcaaggagttcttcagcaagtagataatgcaatt
aatgaagctaataaagcaacaaaaatagctgatgcagagaaagaatatcagtcagtgctg
gatgacataagatcatgtacaacatctctgaaacaaataaataaaattattgagcaactt
tcacctcaagctgctgacaacaaagatataaacagaaaactagattctgtaaaacggcaa
aaatataacaaggaacaacagctaaagaagatcaaagcaaaacaaaagcgtctgcaagca
attcttggtggaacggacattcttgataaagtaaatgagattgaatttgaggaagatgaa
gaacctggtccatcatgtcttggcagtatgcttatgcccgttcaggaaacggagtgggat
gagcttattcgtactggccagatgactccatttggaactaaaatacctcagaagccagag
aagaagacacgacgattaatgttaaatgacacatctgattttgagaagtacttagcagac
caagataagctgttatctgaaagaaagaagttatctcttcacaaaggagcaaaaaagaaa
gcacaagccaaaaatgttcagtgcatagcgcctacatctactacaagggaaaagaggggt
aaagccctgtcaaaaacagataagcgcttaaaaaaacacctgagaaaacttcagaagcat
gccctccagattaagtcaaaggcagagattccaaaagaaaagaaatatcttgaggacaag
aaggtcaggcgtgaacaggaggatgatagtggagagtctgagtatgtacctgatgaggag
ctctttgatccagaagcagcagaagaggaggaagagcaggctgagaattattctgattat
gaactcgggaatttgtcaagcaaaaaaaaatattcggtgaagagagattttaaagaagct
gaagatgatgctgacttctttccaagctctgaggaagaagagcatacactggggaagcgc
aaagtaaagaggtggagagatgatggagatgaagactattataaacagagactaaggagg
tggcaaaaagaacgtttgaaggacaaagaacatcaaacagctgaggaaatttctgaagaa
agtgacactgaatttgaagagggtttcaaagtaccaggatttctcttcaaaaagcttttt
aagtaccagcagacaggtgttaggtggctctgggaattgcactgccagcaggcaggagga
attctgggagatgagatgggattgggcaagaccatccagataattgccttcttggcaggt
ctgagctacagcaagatcaggactcgtggttcaaattacaggtaccagggattgggtcca
acagtgattgtttgtccagctactgtgatgcaccagtgggtaaaagaactccatacatgg
tggcctccatttagagtggccattctccacgaaactggttcttataccgacaaaaaggcg
aaactaattcgtgaaattgtttcatgccatggaattttaattacatcttattcatacatt
cgactgatgcaggatgtcatccacagctatgactggcattatgtgattctggatgagggt
cacaaaatccgaaatccaaatgctgcagtcacacttgcgtgcaagcagttccgcacaccc
catcgaatcatcttgtctggctcccctatgcaaaataacctgaaggagctctggtccctc
tttgacttcgtattcccagggaaattgggaacactgcctgtgttcatggagcaattttct
gttccaataaccatgggaggatattccaatgcctctcctgtgcaggtaaaaactgcatac
aaatgtgcctgtgtgttacgggacaccataaacccctacttgctgcgaaggatgaaggct
gatgtaaaaatgagcctttcacttcctgataaaaatgaacaggtcctcttttgccgtttg
acagatgagcagcgtcaagtctatcaaaatttcatcaactctaaagaagtttaccagatt
ctcaatggagacatgcagattttctcaggactagtatctttgcgaaaaatttgcaaccac
cctgacctcttctctggtggtcccagaattttgaagggtgtaccagacgctgaagtggag
gaagcagatcagtttggatattggaaacgttctggaaaaatgatagtggtagaatccttg
ctgaaaatttggcacaagcaaggtcacagagtgttgttttttactcagtcaagacagatg
ctgcagatacttgaagtctttgtgagagacagaaactattcctacctcaggatggatggc
accacaacaatagcttccagacaaccccttataacaagatataatgaggacaaatccata
tttatttttcttctaacaactcgtgttggtggcattggagttaacttgactggtgctgac
cgggttattatttatgatcctgactggaatcccagtacagacacacaggctcgggaacgt
gcttggagaataggccaaaagaaacaggtgactgtgtataggcttctcactgcaggtact
attgaagagaagatataccacagacaaatcttcaaacagtttttaacaaacagagtgctg
aaagatcctaagcagaggcgctttttcaaatcaaatgacctttatgaactttttaccctg
agcagcccagatgtgtctcaggggacagaaacaagcgcaatttttgcaggtactggttca
gatgttcaagtcccaaaacaccaatttaaacggaaacttgaaaagccacctgatagtgac
acttctaaaggtgacctctgtcttccagaaggcagctcaccaaagcgcagcaagtcatcc
aattcctactcaaccacccacttgacaaattcttcttctaaagcaatagagacaaatgag
gaaaccaaaagaaacttggaaacctttgatcaaaacagctatgcaaaagataatgtgcaa
gctgctactaatacaaattccttgaatacaagcaaggaggaaggcttggaaagagctgac
aaatctgtgtcccagtcattgccaggtgatgcagggtcttcagagaatgccaaatgtctg
aacactgtggtggccgatgaagtacatggagcatgtagtgcaaatgtccagggagatttt
agccttacatgtggtgcagctggctcttgggaaaagcaggttgctaaaactgaagatggg
caattagataataatcattataaacgtacctcaaaaacaaagcacagggtggatgtgctg
tcaaacgagagccacaaagacaagtctaagaagaaacatcacaaagatgccaaatttgaa
ggagagcgcattcctcatctagtgaaacaaaagcgatatcgaaaggagaacagtgaagag
aaggaggaagactcacagaaaaatgatgattacgtcttggagaaactcttcaaaaaatca
gcgggggtacacagtgttatgaagcatgatgtcattatggaagcttccagtgcagatcat
gtgctggtggaagcagaagcaaacagagtggcccaggatgccttaagagccttaaaagtg
tctcgacagcgatgtttaggagctgcttctggtgtgccaacctggacaggcatgagtggt
ctttcaggtgcaccatcaggaataaagagtcggtttggtcaaaaaagaaactccatgctg
ctttcttcacattccacttgcgcaccacctgcaaagaagtgcaaggatgcagatacaata
aagaaagaaaatgtaaagaagtgtagttccaatgggcactttgatggaaaatctggagaa
tcatcgtccagtgcactagactcttcctctttattagctaagatgagggcaagaaaccac
cttattttaccacaacggacaggggacgagggagatgaaaatcatcagcaagcacccgcc
ccagccctggcttcaacagaatacgatgaactgctcgtggatgtgcgtaacttcatagcg
ttccaggcccgcgtggatggtgaggctagcactcaggaaatactgcaggaatttgagtcc
aaactgcctgtggcacagtcctgcgtctttagagaacttctccgcaatctctgcaccttc
catagaagcccaaacggtgaaggtgtctggaggctaaagccagaattccactga
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