Charadrius vociferus (killdeer): 104289828
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Entry
104289828 CDS
T08577
Symbol
VCL
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04510
Focal adhesion
cvf04520
Adherens junction
cvf04810
Regulation of actin cytoskeleton
cvf04820
Cytoskeleton in muscle cells
cvf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104289828 (VCL)
04520 Adherens junction
104289828 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104289828 (VCL)
04810 Regulation of actin cytoskeleton
104289828 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104289828 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvf04812
]
104289828 (VCL)
04147 Exosome [BR:
cvf04147
]
104289828 (VCL)
Cytoskeleton proteins [BR:
cvf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104289828 (VCL)
Exosome [BR:
cvf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104289828 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
104289828
NCBI-ProteinID:
XP_009887142
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MEECINQQLDFNVGKETVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPA
RDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNL
GPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIE
EALKNRNFTVEKMSTEINEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWL
RDPNAPPGDAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQG
ATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEG
EEHIKGIMAEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAK
QIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVA
EGHRLANVMMGPYRQDLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLK
ARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATA
EKAAAVGTANKTTVEGIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWID
NVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRIL
LVAKREVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRI
LGAVAKVREAFQPQEPDFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEE
FPEQKAGEAINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNK
RALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKAT
MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW
YQ
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatgcataaaccagcaactggattttaatgttggaaaagagaccgtgcagaca
acagaagaccagatcttgaaaagggatatgccaccagcgtttatcaaagtggagaatgcc
tgcaccaaacttgttcgggcagcccagatgctgcaagcagatccttattcagtaccagct
cgtgactatctaattgatggatcaagaggcatcctttctggaacatcagacttacttctg
acatttgatgaagcggaggtccgtaaaatcatccgtgtctgcaaaggaatattggaatat
ctgactgtggcggaagtagtagagacaatggaggatttggtgacatacacaaagaatcta
gggccaggaatgacaaagatggcgaaaatgattgatgagagacaacaggaattaactcat
caggaacatagggttatgctggtcaactccatgaatactgtgaaggagctattgccagta
cttatttcagctatgaagatttttgtaaccacgaaaaattctaaaagccagggaatagaa
gaggcattgaaaaatcgcaatttcacagtagagaaaatgagcactgagataaatgaaata
atccgtgtattacaactcacttcctgggatgaagatgcctgggcgagcaaggacactgaa
gccatgaaaagagctttagccttaatagattcaaagatgaaccaggcaaaaggttggctg
agagatccaaatgcacctccaggggatgctggtgagcaagcaataaggcagatccttgat
gaagctggaaaagcgggagaactgtgtgccggcaaagaacgcagagagattttgggaaca
tgcaaaactctgggccagatgactgatcaactggctgacctcagagctagaggacagggt
gctacacccatggctatgcagaaggcgcagcaggtgtcacaaggtctggatttgctcact
gcaaaagtggagaatgcagcccgcaagttggaggccatgacaaactctaagcaggcaatt
gctaagaagattgatgctgctcagaattggcttgcagatcctaatgggggcagtgaagga
gaagaacatattaagggaattatggctgaagcaaggaaagttgcagaattatgtgaggag
cctaaagaaagagatgatattcttcgttccttgggggaaatttctgctttgaccgctaag
ctgtcagatctgcgacgacacgggaaaggtgactctcctgaggcccgtgcgttggctaag
cagatagctacatcacttcagaatttacagtccaaaacaaacagggctgtagcaaatact
aggccagttaaagcagctgtccatttggagggcaagattgagcaagctcaaaggtggata
gacaatcctacagttgccgatcggggagtaggccaggcagcaattcggggtctggttgca
gaaggtcatcgtttagctaatgtcatgatgggaccttatcgtcaagacctgcttgccaag
tgtgaccgtgtggaccaactggctgctcagctagctgacctcgcagcaagaggagaggga
gaatctcctcaggcaagggcaattgctgctcagcttcaggactcactgaaggatcttaaa
gcacggatgcaagaggcaatgacccaggaggtttctgatgtttttagtgacaccacaact
cctattaaattattagcagtagcagccactgctccctctgatgctcccaatagagatgag
gtgtttgatgaaagagcagcaaactttgaaaaccacgctgctagactgggagctacagca
gaaaaagcagctgcagttggaactgcgaataaaactactgtggaaggcattcaggcaaca
gtgaaatcagcaagggaacttaccccacaggtagtatcagctgctcgtatcctcctgaga
aatcctggaaatcaagctgcttatgaacatttcgagaccatgaaaaaccagtggattgat
aatgtagaaaaaatgacagggctggtggatgaagccattgatactaaatcactgttggat
gcatcagaagaggctattaagaaagatcttgataaatgtaaagttgcgatggccaacatt
caacctcagatgctggtagctggtgccaccagcattgctagacgagcaaaccgcatccta
ctggtagcaaaacgggaggttgaaaattcagaagaccctaaattccgtgaggctgttaaa
gcagcctctgatgagctaagcaaaactatatcgccaatggtaatggatgctaaagctgtg
gcaggaaacatttctgatcctggtttgcagaagagtttcttggattctgggtacagaatt
ctgggagctgtggccaaagtcagagaagccttccagcctcaagaaccagattttccccct
cctcctccggaccttgagcagcttcatctgactgatgagcttgctcctccaaaaccacca
cttccagaaggtgaggttcccccgcccagaccaccaccacctgaagaaaaggatgaagag
ttcccagagcagaaggcaggagaagctattaatcagcccatgatgatggctgctaggcag
ttgcatgacgaagcacggaaatggtctagcaagggtaatgacatcattgctgctgctaaa
cgaatggcgcttctcatggcagagatgtcgcgcctggtgagaggaggtagtggaaacaag
cgtgcccttattcagtgtgcaaaggatattgctaaggcatcagatgaagtcactcgactg
gccaaagaggtggcaaagcagtgcactgacaagcgcatcagaacaaacctgttgcaggtc
tgtgagcgaatcccaaccatcagtacacaactcaaaattctttccactgtcaaagctacc
atgctgggcaggactaacatcagcgatgaagagtcggaacaggcaactgagatgttggtt
cataacgcccagaatctcatgcagtctgtgaaggaaactgtgagagaagctgaagcggca
tccattaagataagaacagatgctggattcacacttcgctgggtcagaaagaccccatgg
tatcagtaa
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