Charadrius vociferus (killdeer): 104289863
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Entry
104289863 CDS
T08577
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104289863 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104289863 (RNF43)
Enzymes [BR:
cvf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104289863 (RNF43)
Ubiquitin system [BR:
cvf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104289863 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
KIAA1549
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
104289863
NCBI-ProteinID:
XP_009887180
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MATLQAGLGHTGLALAAAVESERAAAQKAIIRVIPLKVEPIILEGEFANVAEVTPAEGKL
LQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANKAKLAGERGARAILFDIT
DDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVKIEVKEPPAWPDYDVWIL
LTVVSTVVVIILIFVVRTKCQLNRTQDSLQQQTMQAIGQLATRKYRGRCRQAARWDSASS
CSSAPVCAVCLEEFSEGQELRIISCSHEFHRECVDPWLQQHHTCPLCMFNILARDSVDQA
TAAGSRLAPRDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRSFPPEPAHGNPFFHSPEL
SQLDFGTIHYMPYRPATSLLACGHPSPLAPGLLDKGREQPRALRETRPRSLDLMVPGGAA
PAKPQVLSHVHYHHHQHHHYRRDMECPSGRAGQGPGQRKSRYSGAKVGFHSARTQRRTEK
SHHCQQPLESSAVPQEAALAGQPACPQQGREPPHAPSASPDRLDFSVDANRQSGAAGSSP
APLPPRHSLQSRHHRRKRKCPLEPDPALLPEDSALPKTCDAHVPHGHPASYRCSPEVQPL
IPSAPQPCGSGSRPLWKCLVSGSELKKQEEGLSGQEGNRPSPADFSGTGTPRHSLSLHLH
CPSQQGSRGSEEEVQDVHEHSV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgcaggcaggactgggccatacagggctggcgctggcggcggcggtcgag
tcggagagggcggcggcgcagaaagccatcattcgggtgatccccctgaaagtggaaccc
atcatactggaaggggagtttgcaaacgttgctgaggtgactccagctgaaggaaaactg
ctccagtcgcacccgctgtccctgtgcaacaccagcgaggatgaacacactgaatcagga
ttcatcaccattgtcaagcttgaacagccggatcgggatcccaacccctgcctgtcactg
gctaacaaggcaaagctggcgggggagcgtggagcccgtgcaatcctttttgacattact
gatgatgaaagcgctgctgatcagctgagaaagcccagaggtctgagtcagcctgtggtt
ctgatcaggggccacgatgctgaacttctcatgggcgtcgtgaacaagaacagagaggcc
cacgtgaagatagaggtcaaggagccaccagcttggccggactacgacgtctggattctt
ctcacggtggtcagcactgtggtcgtcatcattttgatttttgttgtccgcacaaagtgc
cagctgaacaggactcaggactccttgcagcagcagaccatgcaggccatcgggcagctg
gccacgcgcaagtaccggggaaggtgccggcaggcagcgcggtgggactcagccagcagc
tgcagctcagccccagtctgtgcggtttgcctggaggagttcagcgagggccaggaactg
cggatcatctcgtgctcccatgagtttcaccgggagtgtgttgacccctggctgcagcag
caccacacatgtccgctttgcatgttcaatattcttgccagagactcagtggaccaggcc
acagctgctggctccaggctggcccctcgggacatggagcccggacggcgtctccacctt
ttccgccagcacccgggacatgccctttaccacctcccacacgcgtatcctcagaggaac
ctcaggagctttcccccggagccagcccatggcaaccccttcttccactctccagaacta
tcccagctggattttggcaccatccactacatgccctacaggccagccacctccctgctg
gcctgtggccacccgtcccccctggcccccggcctgctggacaagggccgggagcagccg
cgggcgctgagggagacgcggcccaggtccttggacctgatggtgcccgggggtgctgct
ccggccaagccccaggtgctcagccacgtccactaccaccaccaccagcaccaccactac
agacgagacatggagtgtccatccgggcgggccgggcaggggcctgggcagcgcaaatcc
cgttactctggggccaaggttggcttccacagtgctcggacacaaaggaggactgagaaa
agccatcactgtcagcagcctctggaaagcagtgctgtgccacaggaggcagctctggca
ggacagccagcctgtccccagcaaggccgggagccccctcatgccccctctgcttctcca
gacaggttggacttcagtgtagatgccaacagacagtcaggagcagctgggtcatctcct
gccccgctgcccccgagacacagcttacagagccgtcatcaccgaaggaaaagaaagtgt
cccctggagcctgaccccgctctcctgcctgaggactcagccctgcccaaaacctgcgat
gctcatgttccccatggccaccccgctagctaccgctgctcgcccgaagtccagcccctt
atcccaagcgctccccagccctgtggctcgggctctcggccgctctggaagtgtctagtg
tccggctcagagctgaaaaagcaggaggaagggttgtcaggacaggagggaaaccgccca
agtcctgctgatttctcagggacgggcacccccagacacagtctgagtcttcaccttcac
tgcccgtctcagcagggcagtcgggggtctgaagaagaggtccaggatgtccatgaacac
tcagtttaa
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integrated database retrieval system
