Charadrius vociferus (killdeer): 104290017
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Entry
104290017 CDS
T08577
Symbol
HDAC4
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
104290017 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104290017 (HDAC4)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104290017 (HDAC4)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
104290017 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
104290017
NCBI-ProteinID:
XP_009887369
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MSKNSSANQRVDVLSFWFVFFFXIFFFSPDGLSGRDQPVELLNPPRVNHMPSSVDVTTAL
PLQVAPTSVPMDLRLDHQFSMPVTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHE
QLSRQHEAQLHEHIKQQQEMLAMKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNK
EKGKESAVASTEVKMKLQEFVLNKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQ
SGVSGTYNHPVLGMYDSKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVT
ALKKRPLDVTGMLNSACNSAPGSGPSSPNNSSNNISAENGIAGSVTSIQAETSLAHRLVN
REGSVTQLPLYTSPSLPNITLGLPATGPSSGGSAQQDAERLTIPTLQQRISLFPGTHLTP
YLSTTTLERDGGTAHNPLLQHMVLLEQPTAQTPLVTDWYLSGLPLHAQSLVGGERVSPSI
HKLRQHRPLGRTQSAPLPQNAQALQQLVIQQQHQQFLEKHKQQFQQQQLHINKIISKPNE
PARQHESHPEETEEELREHQALLEEPYSDRVASQKEAPGLANTVQVKQEPIESDEEEAEP
QQELEPGQRQAEQELLFRQQALLLEQQRIHQLRNYQASLEAAGMPVSFSGHRPLSRAQSS
PASATFPMSVQEPPTKPRFTTGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETG
LRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGG
VGVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFC
YFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPG
SGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGF
DAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALL
GNELDPLPEKVFQQRANANAVHSMEKVIEIHSKYWHSLQRYASTVGYSLVEAQKCDNEEA
ETVTAMASLSVGVKPAEKRPDDEPMEEEPPL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaatagctcagctaaccaaagagttgatgtgttaagtttttggtttgttttt
tttttttaaattttctttttttccccagatgggctttctggcagagaccagccggtagag
ctgttgaatccacctagagtgaaccacatgcctagctctgttgatgtgaccacagcactg
cccttgcaagttgcaccgacttcagtcccgatggatctgcgcttggatcaccagttttcc
atgcccgtgacagagccgacgctgcgcgaacagcagctccagcaggagctgctggccctg
aagcagaaacagcagatccagagacagatcctcattgctgagttccagcggcagcatgag
cagctgtcccggcagcatgaggcccagctgcatgagcacatcaaacagcagcaagagatg
ctggccatgaagcatcagcaggagctgttggagcaccagaggaagttggagcagcaccga
caggagcaggagctggagaagcagcaccgagagcaaaaacttcagcagctaaaaaacaaa
gagaaaggaaaagagagtgcagtggcaagcacagaagtaaagatgaaattacaagaattt
gtcctaaataagaagaaggcattggcacaccggaatctcaaccactgtatatccagtgat
cctcgcttctggtatgggaagacacagcacagctctctggaccagagctccccaccccaa
agtggcgtatccggcacctacaatcaccctgtactggggatgtatgattccaaagatgac
ttcccactcagaaaaacagcatctgaacccaatctgaagttacgatccagactaaagcaa
aaagttgctgaaagacgaagcagccccctcttgcgcagaaaggatggtccagtggttact
gctcttaagaagcgcccgctggatgtcacaggtatgttgaactctgcatgcaacagtgct
cctggatctggtcccagctctccaaacaacagctccaataacataagcgccgagaatgga
attgcaggatcagtcacgagtattcaagcagagaccagcctggctcacagacttgtgaat
cgtgaaggctcagtaacacagcttccactctacacatctccttctttgcccaacatcaca
ctaggactgcctgcaactggcccttccagcggaggatcagcacagcaggatgcggagaga
ctcacaatcccgaccttacagcagcggatctctttatttcctggcacccacctcactccc
tacttgagcactacaacgttggaaagagatgggggaactgcacataaccctcttctgcaa
cacatggtcttactggaacagccaactgcacaaactcccttagtcacagactggtatctt
tcaggactgcccctccacgcacagtctctggttggtggagaacgggtctccccttcaata
cacaaactccgtcagcatcgcccactggggcgcacgcagtctgctccccttccccagaac
gcccaggccctccagcagttagtgatccagcagcagcaccagcagttcttggagaaacac
aagcagcaattccagcaacagcaactgcacatcaacaagattatatcaaaacccaatgaa
ccagctcgccagcatgaaagccaccctgaggagacagaagaggagctacgggaacaccaa
gcccttttggaggagccatatagcgacagagtcgcaagccaaaaggaggccccagggctg
gccaacacggtgcaagtgaagcaagaacccattgagagtgatgaggaggaagcagagcca
cagcaggagctggagcctgggcagaggcaggctgagcaggagctgctcttccgtcagcaa
gcccttctgttggagcagcaacgcattcaccagctgagaaactaccaggcgtcactggag
gcagctggcatgcctgtctcttttagtgggcatcggcctctgtcccgtgcacagtcctca
cctgcctcagccaccttcccgatgtccgtacaggagccacccactaagccaaggttcaca
acaggccttgtgtatgacaccttgatgctgaaacaccagtgtacctgtggaaacacaaac
agccacccagagcacgcggggaggatccagagcatttggtcccggctccaggagacaggt
cttcgtggcaagtgtgagtgtattcgtggaagaaaagcaactctagaagagctgcagaca
gttcactcggaagctcatacgctgctgtacggcacaaaccctctgaacagacagaaactg
gacagcaagaaacttctaggttctttaacatcgatgtttgtcaggcttccttgcggtggt
gttggggtcgacagtgacacaatttggaatgaagttcactcgtctggtgctgctcgacta
gccgtgggctgtgtcattgaactcgttttcaaagtagccacgggagaactgaagaatgga
tttgctgttgttcggcctccgggtcaccacgcagaagagagcacacccatgggtttctgc
tattttaactccgtggcaatcgcagccaagctgctccagcaaaggctgaatgttagcaaa
atccttatagtggactgggatgttcaccacgggaatggtactcagcaagctttctacaat
gatcctaatgttctttatatttcactacatcgctatgatgatgggaacttctttccaggc
agtggtgctcccgatgaggttggcacaggagcaggagttggtttcaatgttaacatggcc
tttactggtggccttgatccaccgatgggagacacagaatacttaactgctttcagaacg
gtagtaatgcccattgccaatgaatttgccccagatgttgtgctggtgtcatctggtttt
gatgcagtggaaggccatcccacacctcttggaggatataatctatcagcgaaatgcttc
gggtacctgacgaagcagctgatgggcctggccggaggtcgcgtcgtcctggctcttgaa
ggaggccacgacctgaccgctatttgcgatgcctcggaagcgtgtgtttctgctttgctg
ggaaacgagcttgaccctcttccagaaaaggttttccagcagagagcaaatgctaatgcg
gtgcattcaatggagaaagtaatcgagatacacagcaagtattggcattcactccagcgt
tacgcctccacggtggggtactccctggttgaggcacagaagtgtgacaatgaggaggca
gagacagtaacagccatggcatccctgtcagtgggcgtgaagccagctgagaagagaccc
gatgatgaacccatggaagaggaacctcccctgtag
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integrated database retrieval system
