Charadrius vociferus (killdeer): 104290027 Help Entry 104290027         CDS       T08577                                  Symbol RTTN Name (RefSeq) rotatin   KO K16484   rotatin Organism cvf  Charadrius vociferus (killdeer) Brite KEGG Orthology (KO) [BR:cvf00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cvf03037]     104290027 (RTTN) Cilium and associated proteins [BR:cvf03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    104290027 (RTTN) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RTTN_N DUF383 DUF445 Motif Other DBs NCBI-GeneID:  104290027 NCBI-ProteinID:  XP_009887377 LinkDB All DBs Position Unknown AA seq 2242 aa AA seqDB search MERKKSNWFQKQLWNSASYWQRPGHELAEIRERSLKTILFKLDHNLISYADLVHEKVLFL NLLEWFNFPVVPMKEEVLTFVNNLIKHPPAAQKLIGIGAVEFFSQLRSNVNPNLQAIIDG IVDGLFFLPSGLPGSLSVHYQTRSQPSVDQPEELFTGYFCQDRSHLLQLEMPPKRTVGMC TLKCLKFSTFPWLTLTSTDRHVLSSNESSLRSNNQSLIWSTCELLQDVIMQDFPAEIFLQ RPKIVQSLLSLLNLAFGGDGRHRLALQAVSCLQQLCILLRSRLNFHRDPSFSSMEQGTAS QNSSMSYCQETRGPPRSQNPSPGSSSPRPSVIGRTVQRPRGDGQDWDAASSSGNSTQANA NSRIPLHSPFDARHIDLPDIENEDTLELQMKQLSLPQFCVSILENAIPLLRTGSRRVTME VLELLVEDMSLIGDAISENVWEDDSLFALELRDKLLLVLGLLGETILYHKTNTSTEQPEM MVVHHRMSFISISVFTVRLLQMLLPVEKASKVVQKSLLNALFLLSLDLSFSLEHPSIHES VAAYLEQMSAENYSIYKQASEAAYSIECTCSFMTEVHKKGDKNLSELVELANKALCSLPY HQHLPLLQECICICSDLWKPAEADSLLQAEGQKVLLCLLSHPSLNIKTEAYHCCLEVVKD CLGIHNIAKPVSSVCHGVHFLLHPKVLYEICTFGLQEDKNEVNSTAKAILMHLLQGRLVM AVLTWNKFIEALYPIIPVLQGYADTKDSLGNCILNLSATTSDKGEGILPRTTRLRAALRL LFSKKQLVRSTALKHLTFHLLNEEEANLKRPHLHGSVLSNVSNLFVIERAIELKLDDKTE SIFKVKTVEKLHDILTSEAVDLVLRKSAAEQLVIILEDTKMHGIVKKLGVIEKILAYLNE CIHVDGKLMESIVLPCLTLLRKLVYADPVVRLSLAQQSSLLLLLFRVSLIFQDDHAVLTE TTVLLCLLLFDEVARTETWYGKTINDTGVPAFSLPVAVVRRYHLPVRITAHHVVSPNTVV VPLSSEYLTMKPVSDMLKMAWNLSWYHGIENLLQLINYEKEAEIFLDSLKLSAEDILILK ITHINYGLQDCLNSIIQAVSHRDVRAALTRLSFYILNDRLALKCSSGSCGTTLKSFVWQK AINRFLQVLPASVEDEKLLVDVLRFLNKLLKEQRSTLESDHLKWILKSLLKNKPKSLLGL LVRSESQVREEIDEMQTAVRQQLDKELIRLFNTLLFCSMSVTDREGLELAGSFRTELALK LLQCLRLTDAPHFYGLPSLERTLRGMVHVTALPNWSTYSAAVEPVTICKKYLAGLLEVIS SFYVEWGGNAMSFMGKGVTKSTVLCLLHLSHEMMAQAKDMDWISLWSLPYDNSEEQVASQ LGLAWLVPLWVDRDPEVRFTALGIGSALTSLEIGCIALAESCQNISGGLWGTVINILLDQ SECSMVRREAAFILQNLLVIPIPTEDVKDCIWQGPCVHDEESGLSQTGKPALKALLYHCQ FYEHVNQMVKHCYLGCYMFDLNSSKEENLIERGGITDFDDSLNLWKAPSSQSRTSHSQST SETMIQSVSPSLGSVTELQAIVPTNSTSFIPEPVVDRLIAQGQSVTTTTESRSQHGSPMS VTLSKQRAVVTPALLSAVCSLLHNLLVVTPEDTGISLQQAHLLTALSSLVSANLVERYIL ELKAPLGHPHHIENVKAQVLLLLQYLSSVSRLLKACLLVDSQLVIQDELLKPLLGNTFTI LAIRSKDGLDTELTSVLHETWVDFFNLLATLLWKSGQTSFPAVTAAFANRCTAIIDTIYD CVHLSATYPALYMASLQFLSVLLNEEGRRQLQDKQSICESPTISFLLDHVEGCQVSVTQL TALIIQICERKSSKDVLKEVATNALLSLLAVSKNAQKCALEVDLIDSCIENMKHINAQLN LDALKPGKAQKKKEDNLIKQLRCSMQLLRNCLFQNEECKMAALKAHVVPVLHSLWPWFLI DDSSMQIALHMLCVYTANYPAGCASLCWASGGQSLLPSGRSAAGNSLMHNILKLASQVSN DNSPAQQVVFCLLSNLALSHDCKGIIQKSNFLQNFLSLSLPKGSHKNPGNVSTLWLKLLL NISFGEDGQQMIMKMNGFLDQIVEMCNYKHKSSQHLALLILHNICFSPANKPKILANDKA IAVLSACLESDSCAVQRIGAASLWALLHNYQKAKVTLKNPSIRRRIDEAYSLVKKTTAQP EENELHAYHLKCLENVVQLLDS NT seq 6729 nt NT seq  +upstreamnt  +downstreamnt atggagaggaaaaagtcaaactggtttcagaagcagttatggaattctgcaagctactgg caaagaccaggtcatgaactggcagagataagagagcgatctttgaagactattctgttt aaattagatcataacttgatttcatatgccgatctggtccatgaaaaagtgcttttcctt aatcttttggagtggttcaattttccagtcgtaccaatgaaagaggaagtactaactttt gtgaacaatttgatcaagcatccacctgctgctcagaaactgattggaattggcgcagtg gaattcttctctcaacttcgttccaatgtgaatccaaacttgcaggctataattgatgga attgtggatggactgttcttccttccttctggacttcctggttctttatcagtacattat cagactcggtctcagccttcagtagatcagccagaggaattattcactggatatttttgt caagatagaagtcatctgctgcagttagaaatgcctcccaaacgaacagttggtatgtgt actttgaaatgcttgaaattttccacgtttccttggctaactctgacttcaacagataga catgttctttcatcaaatgaaagctctttgagaagtaacaaccaaagtttaatttggagt acatgtgagctgctgcaggatgtgattatgcaagattttcctgctgagatcttccttcag aggccaaagattgtacagagccttttgtctctgctaaacctggcttttggaggagatgga agacatcggttagctttgcaggctgtgtcatgcctgcaacagttgtgcatcctcttgaga agcagacttaactttcacagagatccaagtttttcttccatggagcaaggcacagcttcc cagaattcatctatgtcttactgtcaagaaacaagaggtcctcctcgttctcagaatcca tcacctggaagtagtagccctcggccatctgtgattggacggacagttcagcgacctaga ggagatggtcaagattgggatgcagcgtcttccagtggaaacagtactcaagcaaatgca aactccagaatccctctgcattccccatttgacgcaagacatattgacctaccagatatt gaaaatgaggacactttggaattacagatgaagcagcttagccttcctcagttttgtgtt tccatcttggaaaatgcaatacctcttctaagaacaggtagcaggagagtgacgatggaa gttcttgaattgcttgttgaagacatgtcccttatcggtgatgctatttctgaaaatgtt tgggaagatgatagcctttttgcattggaattgcgagacaaattgcttctggtcttaggt ttgctcggagaaactatattatatcacaaaaccaatacaagtacagagcagcccgagatg atggtggtgcatcacagaatgtcatttattagcatttcagtcttcactgttagattgctg caaatgcttctccctgtagaaaaggcgagtaaagttgtacaaaagagtttgctgaacgct ttatttcttctgtctctggacttgtccttctccttggaacacccaagcattcatgaatct gttgcagcctacctggagcagatgagtgctgagaactacagtatttataagcaagcttca gaagctgcgtattcgattgaatgcacttgtagctttatgactgaagttcataagaagggg gacaagaatctttctgaattagtcgaactggcaaataaggccttgtgtagtctaccctac catcaacacttgcccttgcttcaggaatgcatttgcatatgctcagatctttggaagcct gctgaggctgattcattgctccaggctgagggtcagaaggtgcttctatgtctattgtct catccttcgttgaatataaaaaccgaagcctatcactgctgtttggaagtcgttaaggac tgtttaggtattcataatattgcaaagcctgtgtcttcagtctgccacggagtacatttt cttcttcatccaaaagttttatatgaaatctgtacatttggccttcaggaagataagaac gaggtgaactctacagccaaggccattctgatgcatctgttgcagggacgattagtaatg gcagtattgacttggaacaagtttattgaggccctctatcccatcattcctgttttgcag ggttatgctgacacaaaagattcactaggaaactgtatcctcaatttgagtgcaacaacc tctgacaaaggagagggtattctccctagaactactagactacgggctgctctgcgtctt cttttctcaaagaagcaattggttcgttctacggcacttaaacatttaactttccatctt ttgaatgaagaagaggcaaacctgaaacgtccgcatctgcatggtagtgtgctttccaac gtttcaaacttatttgttatagaaagagctatcgagctaaaattggatgataaaacagag tcgatatttaaggtaaaaactgttgaaaagctgcatgacatcttgacttctgaagctgtt gacctagttttacggaagtctgcagctgagcagctagttatcattttagaagataccaaa atgcacggcattgtgaaaaagttgggtgtgatagaaaagattttggcttaccttaatgaa tgtatacatgtggatggcaagcttatggaatccatagtgttaccatgtctaacactgtta cgcaaacttgtatatgctgatccagttgttcgtctgtccctagcacagcaatcatcttta ctgctgttgctcttcagagtttccctcatattccaagatgatcatgctgttttaactgaa acgacagtattgctttgtcttctgttgtttgatgaagtagcaagaacagaaacgtggtat ggaaaaaccattaatgatactggcgtacctgccttcagtttacctgttgctgttgttaga aggtatcatctcccagtcaggatcactgctcatcatgtagttagccccaatactgttgtg gtgccattatcttctgagtacttgactatgaaacctgtgtcagatatgcttaagatggct tggaatctgtcgtggtaccatgggattgaaaacctattgcaactgataaattatgagaag gaagcagaaatatttttagattcactaaagctatccgcagaagacattcttatactcaaa ataactcacataaactatggactgcaggattgtcttaattcaatcattcaagcagtgtcc cacagggatgttagggctgctctcactaggcttagtttttacattctaaatgacagactt gcattaaaatgcagttctgggtcttgtggaaccactttgaagagctttgtttggcaaaaa gcaataaacaggtttttgcaagtgcttccagcttctgtggaggatgagaagcttttagta gatgtcttaagatttttaaacaaattgcttaaagagcagagatcaactttggagtcggac catctaaagtggatcctgaaatcattgcttaaaaataagccaaaatcccttttgggcctc ctggtgcgatcagaatcccaagtgcgggaagaaatagatgaaatgcagactgctgtcagg cagcaactggataaagaactcattcgtctttttaacacattgttattttgttccatgtca gtgactgacagagagggcttggaacttgctggctctttcagaactgagctggctctgaag ctgctgcaatgcttaaggctaacagatgcaccacatttttatggacttccttctctggag agaacattacgaggaatggttcatgttactgcacttccaaactggagtacctactctgct gcagttgaacctgtcacaatttgtaagaaatatttagcaggtcttcttgaggttatctcg tccttttatgttgaatggggaggaaatgctatgtccttcatgggaaaaggtgttacgaaa agcacagttctttgcttgcttcacttatctcatgaaatgatggcccaagccaaggatatg gattggatatctctttggtctttgccttatgataacagtgaagaacaagttgcttctcag ctaggtctggcatggctggttcctttatgggtggatagagaccctgaggtcagatttaca gcacttggaataggatcagctcttacatctcttgaaataggatgtattgctttagcagaa agttgccagaacatttcaggagggctgtggggaacagtgataaacattcttctggaccaa tcggaatgtagcatggtacgcagggaggctgcttttattctacaaaatctccttgtaatt ccaattcctacagaagatgtgaaagattgtatttggcaaggtccctgcgtacatgatgaa gaatctggcctctctcagacaggaaaacctgcacttaaggcccttttgtatcactgccag ttctatgaacatgtgaatcagatggtgaaacactgttacctaggatgttatatgtttgat ttgaattcttccaaggaagagaacctcatagaaagaggtggtataactgattttgatgat tctcttaatctttggaaagctccatccagtcaaagccgaacttcacattctcagtcaaca tctgaaactatgattcagtctgtatcaccatcactggggagtgttactgaacttcaggca atagtcccaaccaattcaaccagttttattcctgaacctgtagttgatcggcttattgca caaggtcaaagtgttacaaccacaacagaatctcgaagtcaacatggttcccccatgtct gttactctgtctaaacagcgtgcggtagtcacacctgcccttttgtcagctgtttgcagc cttctgcacaatctgctggttgtcacaccagaagatactggaatttctcttcaacaagca catttgctaacagctctcagcagtcttgtaagtgctaatctggttgagagatatatcttg gaactgaaagctccactgggtcatccacatcatatagaaaatgtaaaagctcaggtgtta ttactacttcaatacttgtcatctgtgtccaggcttctgaaagcatgtttattggtggac tctcagcttgtaatccaagatgaactgttgaagcctctcttgggaaataccttcacgatt cttgccattcgctccaaagatgggttagatactgagttaacatctgtacttcatgaaaca tgggtagactttttcaaccttctggctacgttattgtggaagagtggccaaacatctttt ccagctgtgacagcagcctttgcaaatcgttgtacagcaataattgataccatttatgat tgtgttcatctgtcagcaacatatcctgctttatatatggctagtttacagttcctctct gtccttttgaatgaggaaggaagaagacagctccaagataaacagagtatatgtgagagt ccaactattagctttcttctggatcatgttgaaggatgccaggtgtcagtaactcaactt actgcattaattattcagatctgtgaaagaaaatcttcaaaggatgtgctgaaagaagtt gctacaaatgcactgctgtctctgttagctgtcagtaaaaatgcccagaaatgtgctttg gaagttgatctgatagacagctgtatagaaaacatgaaacatattaatgcacagctgaat ttggatgccctaaagcctggaaaagcacagaaaaaaaaggaggataaccttatcaagcag ctaaggtgttctatgcagctcctcagaaactgcctctttcaaaatgaagaatgcaaaatg gcagcactcaaagctcacgtcgttcctgttctgcattcactatggccgtggtttttaata gatgactcctcaatgcaaatagctctgcatatgctttgtgtctacactgcaaactatcct gcaggttgtgcttcactttgttgggctagtggtggacaatcattacttccgtctggacga agtgcggctgggaattcgttaatgcataacatcttgaaattggcttctcaagtgtcaaac gataacagcccagctcagcaggtggtcttttgtcttctttctaaccttgctctgtctcat gactgtaaaggcattattcagaagagtaacttcctgcagaactttttgtctctttcatta ccaaaaggaagtcataaaaatcctggtaatgtgtctactctttggctaaagctcctactg aacatatcttttggagaagatggacagcagatgatcatgaagatgaatggttttttagac cagattgtggaaatgtgtaactacaaacacaagagcagccagcatctagcgcttctcatt ctacataacatatgttttagtccagctaataaaccaaagatattagctaatgacaaagcg attgcagtactgtctgcctgtttggaaagtgatagttgtgctgtccagagaataggagca gcttcactttgggctttgcttcacaactatcagaaggcaaaagtgactttgaagaatcca tcaataaggagaagaatagatgaggcttattctttagtgaagaaaactactgcacagcca gaagaaaatgagctacatgcctaccatttaaaatgcttggagaatgtagtgcagcttctg gattcttaa

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