Charadrius vociferus (killdeer): 104290060
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Entry
104290060 CDS
T08577
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104290060 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvf03021
]
104290060 (SMARCD3)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104290060 (SMARCD3)
Transcription machinery [BR:
cvf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104290060 (SMARCD3)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104290060 (SMARCD3)
PBAF complex
104290060 (SMARCD3)
GBAF(ncBAF) complex
104290060 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
104290060
NCBI-ProteinID:
XP_009887413
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATDEVTGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYVGSPSVRPGM
PQTVMETTRKRTAPQQVQQQQVQQQVQQQQQATQNRTRSAKRRKMADKILPQRIRELVPE
SQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKSDADDSDGS
IASWELRVEGKLLDDLSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGF
QVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSAIIQALWQYIKTNKLQD
SHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACY
DIDVEVEDPLKGQMSSFLLSTANQQEITALDNKIHETIESINQLKIQRDFMLSFSKDPKG
YIQDLLRSQSRDLKVMTDVVGNPEEERRAEFYHEPWSQEAVSRYFYCKIQQRRQELEQSL
GVRNT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatgaagttacaggaggggctcgcaaagctacgaaaagcaaactttttgag
tttctggtccatggggtgcgacctgggatgccatcaggagctcgaatgccccatcagggg
gctcccatgggtcccccaggtcccccgtatgttggaagcccctcagtgcgacccgggatg
ccccagactgtgatggaaacgacaagaaaacgcactgcaccacagcaggtccagcagcag
caggtgcagcagcaagtgcaacagcagcagcaagccactcagaaccgtactaggagtgcc
aagaggaggaagatggctgacaaaattctccctcagaggatccgggagctggttcctgag
tcccaggcctacatggatctgttggcctttgaacgcaaactagaccagaccattatgcgg
aagcgtgtggatattcaggaagcactgaagaggccaatgaagcaaaagcggaaactgaga
ctttacatctccaacacatttaatcctgcaaaatccgacgctgatgattctgatggcagc
attgcttcatgggagctgcgagtggaggggaagctcctggatgacctcagcaaacagaaa
cggaagttttcatctttttttaagagtttggttattgaactggacaaagacctgtatgga
cctgacaaccatcttgtggagtggcacagaactcccacaacgcaggagactgacggcttc
caggtgaaaaggcccggtgatgtcagcgtgcgctgcacattgctcctcatgctggactac
cagcctccacagtttaaactggacccgcgattagcccgtttgctggggatacacacacag
acccgatcagccatcatccaggctctctggcagtacatcaaaacaaataagctgcaggac
tcccatgataaggaatacattaactgcgacaagtacttccagcagatctttgactgtcca
cggctaaagttttctgaaattcctcagagactcactaacctgctgctgccaccagaccct
attgtgataaaccatatcatcagtgttgaccccaacgatcagaagaagacggcttgttat
gacatagacgtagaagttgaagacccattaaagggacagatgagtagttttcttctctca
acagctaaccaacaggagattacagcattggacaacaagattcatgagacgattgaatcc
ataaatcagttaaaaatacaacgtgatttcatgctgagtttctccaaagatcccaaagga
tacatccaagaccttctccggtcccaaagtagggatcttaaggtgatgactgatgtagtg
ggaaacccagaggaagaacgcagggctgaattttatcacgagccatggtctcaagaggct
gtgagcagatatttctactgcaagatccagcagcgccggcaggaactggaacaatctctg
ggagtgcgcaacacataa
DBGET
integrated database retrieval system
