Charadrius vociferus (killdeer): 104290072
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Entry
104290072 CDS
T08577
Symbol
TOP2A
Name
(RefSeq) DNA topoisomerase 2-alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvf03032
]
104290072 (TOP2A)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104290072 (TOP2A)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
104290072 (TOP2A)
DNA replication proteins [BR:
cvf03032
]
Eukaryotic type
DNA Topoisomerases
104290072 (TOP2A)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
104290072 (TOP2A)
Centrosome formation proteins
Centriole proteins
104290072 (TOP2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
Endostatin
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Collagen
Motif
Other DBs
NCBI-GeneID:
104290072
NCBI-ProteinID:
XP_009887422
LinkDB
All DBs
Position
Unknown
AA seq
1867 aa
AA seq
DB search
MCRQGEKGEHGLPGMPGSPGRTGETGSPGMPGPMGPPGPPGDYRCDSRHAGHRGSAGPPG
PKGCCYGEHGCKPGHLPFPGTGSQSGSWVPISGYQTGGKEEPEIYGAIIPHGLRGPPGPP
GPPGPPGAPGLLYLNRVYPIRAQPPCKQPLEDSESLFASDDPSASTPRYQDAKRMQTRGP
NTGPPSLAPTDLLVQKEDGQGLPQILPTTIAPRIPSLRLAALNMPLAGGMSGIRGADLQC
CRQSQEARLYGTFRAFPSAPTQDLVSIVKRTDRTLPIVNLKGQLLAKSWSSLFEGQAGAA
PRSPIYSFNGRNVLTDPLCPEQPANENLRAPKGDGTKKGLSVEHIYQKKTQLEHILLRPD
TYIGSVELVTQQMWVFDEGVGLNCRDVTFVPGLYKIFDEILVNAADNKQRDKSMSCIKVT
IDVENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDNEKKVTGGRNGYGAK
LCNIFSTKFTVETACREYKKLFKQTWTDNMGKAGEMKLKHFDGEDYTCVTFQPDLSKFKM
TILDKDIVALMSRRAYDIAGSTKDVKVFLNGQRLPVKGFRSYVDLYLKDKVDETGNALKV
IHEEVNSRWEVCLTLSEKGFQQVSFVNSIATTKGGRHVDYVADQLVTKLIDVVKKKNKNG
VGVKPFQVKNHMWIFVNCLIENPTFDSQTKENMTLQAKNFGSTCKLSEKFIKGAVGCGIV
ESILNWVKFKAQSQLNKKCSAVKHTKIKGVPKLDDANDAGSKNSLDCTLILTEGDSAKTL
AVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDQESL
KSLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKASKNKEEIA
FYSIPEFEEWKNSTQNYNSWKIKYYKGLGTSTSKEAKEYFADMAKHRIGFKYSGPEDDAA
ITLAFSKKKVEERKEWLTNFMEDRRQRKLHGLPEEYLYGKNTNYLTYNDFINKELVLFSN
SDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEASLMMTI
INLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPMDDNILRF
LYDDNQRVEPEWYMPIIPMVLINGAEGIGTGWSCKIPNFDIREVVNNIRRLMDGEEPLPM
LPSYKNFKGTIDELGPNQYVISGEVSILDSTTIEITELPVRTWTQTYKEQVLEPMLNGTE
KTPPLITDYKEYHTDTTVKFIVKMTEEKLAEANAVGLHKVFKLQTNLTCNSMVLFDHVGF
LKKYDSPQDILKEFFELRLRYYSLRKEWLIGMLSAESAKLSNQARFILEKIDGKIVIENK
PKKELIQVLIQRGYESDPVKVWKESQNKEEEEEESEKESAAARGPDFNXLLNMPLWYLTK
EKKDELCKQRDNKENELENLKCKSPSDLWKEDLAVFVEELDAVEAKQTQDEMAGFVGKPL
KGKGGKTKVKKAQLTEVMPSPHGIRVVPRITAEMKAEAEKRTKKKIKSEKNEFDENQEEN
TSGDKEPSDLKQRLVQKLNTEPGAKRQATLPFKPLKKMKKRNPWSDSGSDSESDFEAPPQ
RERVVRQAAAKVKTIISSDSDANLSSSDEEPEFQADSEGNTGSDTSSKGKPAPKPRAAPK
GTTEKAAKAPKQKPEQSAVPVQAQDVANENVGQAPAAPSVPAPRTKAVSKKPAATKKASV
AKDNQPSIVDILAKRKAAPKASKAAGKEGAPDAEAGGAGDKKPGQTKGRKVIKRQPSALD
SDSDSDFGVKPSKSVAVKKSKLEDDDSFTVDLTACADSPVAAVPRTRPGRLKKPVQYLEE
SDEDDMF
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgtgccggcagggtgagaagggcgagcacggactgccgggcatgccggggagccctggc
cggaccggagagacgggctccccaggcatgcccggtcccatggggccaccggggccaccg
ggggactacaggtgcgactcacgccacgcaggacaccgcggatcggccggaccgccgggc
cccaaggggtgctgctacggggaacacgggtgcaaaccaggccacctccccttccctggc
accggcagccagtccggctcctgggtgcccatcagtgggtaccaaacgggcggcaaagag
gagccagagatctatggagcgatcattccccatggtcttcgaggtccccctggtcccccc
ggtccccccggtccccccggggcacccggtctcctctacctcaacagggtttaccccatc
cgtgcgcagccgccctgcaagcagccgctggaggattcggagtcgctctttgccagtgat
gacccctccgcctccaccccacggtaccaggacgcgaagaggatgcaaacaagaggtccc
aacacagggccaccctcactggcccccacggacttgctggtccagaaggaggatggacaa
gggctgccccagatcctgccaaccaccatcgctccacggatcccatcactccgtctggcc
gccctcaacatgcccctcgccggcggcatgagtgggatccgtggtgccgacctgcagtgc
tgccggcagtcccaggaggctcggctctacggcactttccgggcgttcccgtcagccccc
acacaggacctggtctccatcgtcaagaggacagacaggactctccccatcgtcaacctg
aagggccaactgctggccaagtcctggagctccctcttcgagggccaggccggtgccgcc
ccacggagccccatctactctttcaatgggcgcaacgtcctgacggatcccctctgcccc
gagcagcccgccaacgagaacctccgggcgcccaagggcgatggcaccaagaagggtctc
tcggtggagcacatctaccagaagaagacgcagctggagcacatcctgctccggcccgac
acctacatcggctcggtggagctggtcacccagcaaatgtgggtttttgatgagggcgtg
ggccttaactgcagagatgtgacctttgtgcctggcttatacaaaatctttgatgagatt
ctagtgaatgctgcagacaacaagcagagagataaaagcatgtcgtgcattaaagttaca
attgatgtagagaataacacaatcagcgtatggaacaacgggaaaggtattccagttgtt
gaacacaaagtggagaaggtctatgtgcctgctcttatctttggacagctactaacatcc
agcaactatgatgacaatgaaaagaaagtcacaggtgggcgaaatggttatggagccaaa
ctgtgtaacatatttagcacaaaatttactgttgaaactgcatgtcgcgaatacaaaaag
ttattcaagcagacctggacagacaacatgggaaaggctggtgaaatgaaactgaaacat
tttgatggagaagattacacatgtgtcactttccaacctgatctgtcaaaattcaaaatg
acaattcttgataaagacattgtagcactaatgtctcgaagagcatacgatattgctgga
tccacaaaggatgtcaaagttttcctaaatggacagaggctgcctgtgaaaggattccgc
agttatgtggacctctatctgaaggacaaagtagatgaaactggtaatgcacttaaggtt
atccacgaggaagtaaattctcggtgggaagtgtgtttgactttaagtgaaaaaggcttc
cagcaagttagcttcgtcaacagcattgccactacaaagggtggcaggcacgttgattac
gtagctgaccagcttgtgactaaactcattgatgtcgtgaaaaagaagaacaaaaatgga
gttggagtgaagccttttcaggtgaagaaccacatgtggatttttgtgaattgcttaatt
gaaaacccaacctttgactctcagactaaggagaacatgactctgcaggcaaagaacttt
ggctcaacctgtaaactgagtgaaaaatttattaagggtgcagttggctgtggcattgtt
gaaagtatcctaaactgggtaaaatttaaagctcagagccagctgaataagaaatgttca
gctgtgaaacacactaagattaagggtgttcctaagctggatgatgccaatgatgctggc
agcaagaattctctagattgtacgcttatcctgaccgagggagattcagccaaaacgctg
gctgtctctggtctaggagtggttggtagagacaaatatggagtatttccccttcgtggg
aaaatactcaacgtccgagaagcttctcataagcagattatggaaaatgctgaaatcaac
aacatcatcaagattgtgggtttacaatataagaagaactatgaagatcaagaatcttta
aagagtcttcgctatggaaagattatgattatgacagatcaggatcaagatggatcacat
atcaaaggtttgctgattaacttcatccatcacaactggccatctcttctaagacacaac
tttttggaggaatttattactcctatcataaaggcctctaaaaacaaagaagaaattgcg
ttctatagtattcctgaatttgaagaatggaaaaatagtacacagaactacaattcgtgg
aaaatcaagtactataaaggtttgggtaccagcacatcgaaggaggctaaagaatacttt
gcagatatggctaaacaccgaattggcttcaaatattctggtcctgaagatgatgctgcg
atcaccctggcctttagcaagaagaaggtagaagagcgaaaggagtggttgaccaatttc
atggaggatagaagacaacggaagctgcatggtctgccagaggaatacctatatgggaaa
aatactaattacctgacgtacaacgacttcatcaacaaggagttagtgctgttctcgaac
tcagataatgaaagatcaatcccgtcactggttgatggtttgaagccaggtcaaagaaaa
gttctgttcacatgtttcaaacgaaacgataagcgggaggtgaaggttgctcagctggct
ggttctgtggctgagatgtcctcataccatcatggtgaagcatcgctgatgatgactatt
attaacttagctcagaactttgtgggcagtaacaacctcaacttgctgcagcctattggt
cagtttggcacaaggctgcatggtggaaaagactctgccagccctcgatacatctttaca
atgctcagcccactagcacgcttgctgttcccaccaatggatgacaatatcctgaggttc
ctttatgatgacaatcaacgtgtggagccagaatggtatatgcctatcattcccatggtg
ctgataaacggggcagaagggattggtactggctggtcctgtaagatccccaactttgat
atcagggaagttgtgaataatatccgtcgtctgatggatggagaagagccgttgccaatg
cttcctagttacaagaatttcaaaggcacaatagatgaactgggacctaatcagtatgtg
ataagtggtgaagtgtctattcttgattctacaaccattgagatcactgagctgcctgtc
agaacatggacgcagacttacaaagagcaagttctggagccaatgttaaatgggactgag
aagacacccccactaatcacagactataaagaatatcacacagatacaacagtgaagttt
atagtgaagatgactgaagaaaaactagctgaagctaacgcagtggggctgcataaggtc
ttcaaactccaaactaatttaacatgcaactccatggttctttttgaccatgtcggcttt
ctcaagaagtacgactctccccaggatattcttaaagagttctttgaactcaggctccga
tactacagtttgaggaaagaatggcttattggaatgctaagtgccgagtctgcaaaactg
agcaaccaggctcgtttcatcctggagaaaatagatggcaaaattgtgatcgaaaacaaa
cccaagaaagagttgattcaagttcttatccagagagggtatgaatctgatccagtgaag
gtttggaaggaatcgcaaaacaaggaggaggaggaggaggagagcgagaaagaatcagct
gcagctagaggaccagacttcaacnnnctgctgaacatgcccctttggtatctgacgaaa
gagaagaaagatgagctctgtaagcaaagagataacaaagaaaacgagctggaaaacctt
aagtgcaagagtccctctgatctgtggaaggaagatcttgctgtctttgttgaagagctt
gatgcagtggaagccaagcaaacccaggatgagatggcagggtttgttggtaaacctttg
aaggggaaaggagggaaaaccaaggtgaagaaagcgcaactgacagaagtaatgccatca
cctcacggcataagggttgttcctcggataaccgcagagatgaaggcagaggcagagaag
agaactaaaaagaaaataaagagtgaaaaaaatgaatttgatgagaatcaagaagaaaac
acatcaggagacaaagagccttcagaccttaagcagagattagtgcagaagcttaatact
gagccaggtgcgaagagacaggccactctaccgtttaagccattaaagaaaatgaagaaa
cgaaacccttggtctgactcggggtctgattcagagtctgattttgaagcacctcctcaa
agagagagagtggttcgccaagcggcagccaaagtcaagactataatcagttcggactcg
gatgcaaatctctccagctcagatgaggagcctgaattccaggccgacagtgaaggcaac
actggatccgatacaagctccaaaggaaaacctgctcccaagcccagagctgctccaaag
ggaaccactgaaaaggcggctaaagctcccaagcaaaagccagagcaaagcgctgtccct
gttcaagcccaagatgtcgctaacgaaaacgtggggcaggctcctgcagctccttctgtc
cctgcgcctcgcactaaggccgtatctaaaaaacctgctgcaacgaagaaggccagtgtc
gccaaggacaaccagccgtccatcgtggatattctggccaagagaaaggctgcacccaaa
gccagcaaggcggcggggaaggagggagccccggatgctgaggctggaggagcgggtgac
aagaagcccggccagaccaaggggcggaaggtcatcaaaaggcagccaagcgctttggat
tcggattcagattccgattttggcgtgaagccttccaaatcggtggcagtaaagaaatcc
aagctggaagacgacgatagctttactgttgatttaactgcttgtgcggacagccccgtc
gcagccgtgccccgcaccaggcctggacgtctcaagaagcctgtccagtacttggaggag
tctgatgaggacgatatgttttga
DBGET
integrated database retrieval system
