Charadrius vociferus (killdeer): 104290118
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Entry
104290118 CDS
T08577
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104290118 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvf01009
]
104290118 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104290118 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
cvf03029
]
104290118 (RB1CC1)
Protein phosphatases and associated proteins [BR:
cvf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104290118 (RB1CC1)
Membrane trafficking [BR:
cvf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104290118 (RB1CC1)
Mitochondrial biogenesis [BR:
cvf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104290118 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
104290118
NCBI-ProteinID:
XP_009887482
LinkDB
All DBs
Position
Unknown
AA seq
1597 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIEDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLDSSAEHGGAESEETEDGKSA
ESVLSSDISKVNNKSMLASFCKSVEHSALEGTDPENVKGDKESGQNAAVKNSETSVELKD
DDQHSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPGIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TAATAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTNSCVKDVSEKASLNVCVEKCRVIAHDSKVHLRGIKEDLCHFRTLVQREQCDFSNS
LKCTSLEIVNTIEKVKLSLEKTLKDKHQKELQSLKSEYETKINKLMEDGEENKKKIKKLK
GDLLGLEEVLQNKNDEFAMVKNEKEAVVCLQNEKDQKLLELECQMETQNCEIKELKQSRE
IVLEDLKKLHVESNEKLQLLRAELESLEQSHLKELENNLQARHLQEFEKVLAEHKDCLDK
LEKENQHRLEQMQESHAVVVQEKQQQVEELQLKISDLSDLRCKLEVELALKEAETDEMKL
LLEESRHQQQETLKSQIDKETESLKKEIDKLNNTIQINSDEYQVGLSELRTLMTIEKDQC
ISELVDRYEEESNLLRTELNKVTLLHQKTSEAEKRLSEQITELQSKLELEANALDKAKTE
KLALCEQQEKYEALIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTACKEFELQRE
AAEKGLLEKIQQLEMQVNRSPPTESSAESSLVAELQEKLQEEKMKFLEQLEEQEKRKNEE
MQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKMLTQQQEKDKDLIETLSEDRA
RLLEEKKKLEEEVNKLRSSNFSPSTYSAAASEACGACAADIPTDTDRLVADITAEGRLDS
TMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIA
IRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVLG
KVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttctggtcaacactggaactacccttacctttgacacagaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagataccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaatgagatggaactg
aaagtagaagaatctctcatgatgcctgcagtgtttcatacggtagcatcacggacacaa
cttgctgtggaaatgtatgaggttgccaagaaactttgctccttttgtgagggtcttgta
catgatgaacatcttcagcatcaaggctgggctgcaataatggccaatttggaagattgt
acctactcttaccaaaaactacttttcaagtttgaaaatgtatattcaagctacttgcag
tccatagaggatatcaagttgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttgggaagactg
gattcttcagctgagcacggaggagcagaaagtgaagaaacggaagatgggaaatctgct
gaatcggtgctttcttctgatatatctaaagtgaacaataaatcaatgttagcctcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgtaaaaggtgat
aaggaatctggtcaaaatgctgctgtcaagaacagtgaaacatctgtagaattgaaagat
gatgatcagcattccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatcgctggtcagaaaatgttttgattctatgagcaggcttgatccagga
atcatccaaccctttctagcagaatgtcgacaaactatcgccaaactagataatcagaac
atgaaggctattaaaggccttgaggataggctctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctacaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcattgctacgtcttgtaacagag
ctcctagaaagggtcaaggttgtagaggctctcagtactgttcctcaaatgtactgtcta
gctgttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcgggt
gctttaataaaagatgggaaacacctgtatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactgttcaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaagcctcgcagatttgacagtgagcttccagatatctca
ttaagtgacttgcagtttttgcagtctttttgtccgtcagaagtacagccgttactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtaaaggcagcacagagtttggatgaaatgtcacagaccattacagacctgctgaatgaa
caaaaggcctccaatagtcaagcatcgccacaatctgccaccacaccaaggatggaaagt
acagcagcaaccgcaattgctacctcttcaagaactcctccatcgctcagtcttcagggt
cccctctgtcctcctgtgtgtcccccagctccgttagaagaattgtctccagacagcatt
gatgctcatacatttgattttgaaactattgctcatccaaacttggagcaagctctcaag
caaggatcacttgacttggattcattagcagaaagtccagaatctgactttatgtcagca
gtaaatgagtttgtaatagaagaaaacccagtatctcctaatgtaataagtgatccacaa
agtccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaaattcttgcgtaaaggacgtttcagaaaaagcatctctcaatgtt
tgcgtggagaagtgtcgggttattgcccacgactcaaaggtacatttaagaggtataaaa
gaagatctttgccactttagaacacttgtacaaagagaacagtgtgacttttctaattct
ttaaaatgcacttcattagaaatagtaaataccattgagaaggtaaaactttcacttgaa
aaaacactaaaagataaacatcaaaaagagttacagtctttgaaaagtgaatatgaaact
aaaattaataaattaatggaggacggtgaagaaaataagaagaagattaaaaagttaaaa
ggtgacttgctaggcttggaggaagttcttcagaataagaacgatgaatttgcaatggtg
aaaaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattacttgaa
ttggaatgccaaatggagacacagaattgtgaaattaaggaactgaaacagtcacgtgag
atagtacttgaagacttgaaaaagcttcatgttgagagcaatgaaaaactgcaactcctg
agggcagaactcgagagtttagagcaaagccatttaaaagaactggaaaacaacctacaa
gccaggcacttacaggaatttgagaaggtgctagctgagcacaaggactgtttagataaa
ttagaaaaagagaaccagcacagacttgaacagatgcaggaatctcatgcagtagttgtg
caagagaaacaacaacaagtagaagagttacaactcaagatttcagatctgtctgatttg
aggtgcaaattagaagttgaacttgccctgaaggaggcagaaactgatgaaatgaagctt
cttttggaagaaagcagacaccagcaacaagagaccttaaaatctcagattgataaggaa
acggaaagcttaaaaaaggagatagataaattaaacaatacaatacaaattaacagtgat
gaatatcaagtgggcttgtcagaactgaggactctgatgacaattgagaaagatcagtgc
atttcagagctagtagacagatatgaagaagaatcaaatttgcttagaactgaactaaat
aaagtaacgcttctccatcaaaaaacttctgaggcagaaaaaagactttcagagcaaata
acggaattacaaagtaagttagagttggaagcgaacgccctagataaggcaaaaacagaa
aaattggctctctgtgagcagcaggaaaaatatgaagctcttatccataagcttaaggaa
gagaaagaactgttagtatctaaccaagaacaagacaggcagttgctcattcagaagctc
aattgtgaaaaagaggatgcagtacaaactgcttgtaaagagtttgaattacagagggaa
gctgctgaaaaagggcttttggaaaaaatacaacaacttgagatgcaagtaaatcggagt
cctcccactgaatcatctgctgaatcaagcctggttgctgaactgcaagagaagcttcag
gaagaaaaaatgaagttcttggagcaacttgaagaacaagagaaaaggaagaatgaagaa
atgcagaacatcagaacatcgcttactgcagaacagcagaccaactttaacactgttctg
gcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaaatg
ctaacacaacagcaagaaaaagacaaggatttgattgaaacactttctgaagatcgagct
cgcttacttgaagagaagaaaaagcttgaagaagaagttaataaactgagaagtagtaat
ttttctccatcaacctactcggcggcagcttcagaagcctgtggagcctgcgcagctgat
attcccactgacacagacagattggttgctgacattacagctgaagggagactggactcc
acgatggaaaccagtatgatggctgtgcatgaaaatgtccatatgtctgaagaaaaacag
aggataatgttgctagaaagaactttgcagttgaaagaagaggaaaataagagattaaat
caaagattgatgtcccagagcatgtcatctgtatcctcacgacattctgaaaaaatagca
attagagattttcaggttggtgatttggttctcatcatcttggatgaaaggcatgacaac
tatgtattgtttactgttagtccaaccttgtatttcttgcactcagaatctcttgctgca
ctggatctcaaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggtgctagga
aaagtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagattcaaagttcct
ttgggtacgaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
