Charadrius vociferus (killdeer): 104290187
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Entry
104290187 CDS
T08577
Symbol
FMR1
Name
(RefSeq) LOW QUALITY PROTEIN: fragile X mental retardation protein 1
KO
K15516
fragile X mental retardation protein
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104290187 (FMR1)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104290187 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
104290187 (FMR1)
mRNA cycle factors
Stress granule specific factors
104290187 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
pAdhesive_11
Motif
Other DBs
NCBI-GeneID:
104290187
NCBI-ProteinID:
XP_009887558
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MWVEPLQAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPAGYNKDINESDEVEVYSR
ANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKPATKDTFHKIK
LAVPEDLRQMCAKESAHKDFKKAVGAFSVTYDSENHQLIILSINDVTTKRANMLIDMHFR
SLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGANIQQARKVPGV
TAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDK
SGVVRVRIEAENDKNIPQEELLXINLKAFLLAKVCIHTSVLPVTGIANTGVAYAASCVSC
VIPGATQKPEIKSWQGMVPFVFVGTKDSITNATVLLDYHLNYLKEVDQLRLERLQIDEQL
RQIGATSRPPPNRTDKEKGYMTDDGPGLGRGSRPYRNRGHSRRGPGYASGTNSEASNASE
TESDHRDELSDWSAAPAEEERDNYLRRGDGRRRGGGARGQGGRGRGGFKGNDEQSRTDNR
QRNSRDAKGRTADGSLEIRIDCNNERSVHTKTLQNTSNEGSRLRTGKERNQKKEKADSAD
GQQPLVNGVP
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtggagcctttgcaggcatttgtaaaggatgtgcatgaagattctataacagtt
gcgtttgaaaacaactggcaacccgagagacagataccattccatgatgtgaggtttcca
ccacctgcaggctataataaagatataaatgaaagcgatgaagtagaggtttattccagg
gcaaatgaaaaagaaccctgctgttggtggttggctaaagtgagaatgataaagggtgag
ttctacgtaatagaatatgcagcctgtgatgctacatacaacgaaattgtcacaattgag
cgtttgagatctgtgaaccccaataaacccgcaacaaaagatacttttcacaaaatcaaa
ctggcagttccagaagatttaaggcaaatgtgtgccaaagaatctgcacataaggacttc
aaaaaggcagttggagctttttctgtaacatatgattctgaaaaccaccagcttattatt
ttgtcaatcaatgacgtaacaacaaagcgggcaaatatgctgattgatatgcactttcga
agtcttcgtaccaagttatccctgatactgagaaatgaagaagctagcaaacagttggag
agttccagacagcttgcgtcgcgatttcatgaacagtttgttgtacgtgaagacctaatg
ggtttggccattggcactcatggtgctaatattcagcaagccagaaaagtccctggagtg
actgctattgatcttgatgaagatacttgcacattccatatttatggagaggatcaagat
gcagtgaaaaaggcaagaagttaccttgaatttgctgaagatgtcatacaagtcccaaga
aatttagtaggaaaagtaataggaaaaaatggaaaactgattcaggagatagtggacaaa
tccggtgttgtaagagtgagaattgaggctgaaaatgataaaaatattccacaagaggag
cttctatagattaacttgaaagcttttttactggccaaggtctgcattcatacttctgtt
ttacctgttactggcattgctaacactggtgttgcttacgctgcttcatgtgttagttgt
gtcataccaggagcaacacagaaacctgagatcaaatcttggcagggaatggtaccattt
gtgtttgtgggaaccaaggatagcatcactaatgcaactgttcttctggattatcatctt
aattatttaaaggaagtagaccagctgcgtttggaaagattgcaaattgatgagcagctt
cgacagattggagctacttctaggccaccaccaaatcgtactgataaagaaaaagggtac
atgactgatgatggtccaggacttggacgcggtagtcgaccttacagaaacagagggcat
agcagacgtggtccaggctatgcttcaggaactaattctgaagcatcaaatgcttctgaa
acagaatctgatcacagagacgaacttagtgattggtcagcagcgccagcagaagaggag
cgagacaactaccttcgcagaggagatggacgaagacgtggaggtggtgcaagagggcaa
ggagggaggggtcgcggaggattcaaaggaaatgatgaacagtcacgaacggataaccgt
cagcgtaactcaagagatgcaaaagggagaacagcagatggatctcttgagatcagaatt
gactgcaataatgaaaggagtgtccacactaaaacattacagaatacctccaatgaaggt
agtcggctgcgcacgggtaaagaacgtaatcagaagaaagagaaagcagacagcgcagat
ggtcaacagccgctggtgaatggagtaccctaa
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