KEGG   Charadrius vociferus (killdeer): 104290203
Entry
104290203         CDS       T08577                                 
Symbol
CUL4B
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03420  Nucleotide excision repair
cvf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104290203 (CUL4B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104290203 (CUL4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvf04121]
    104290203 (CUL4B)
   03400 DNA repair and recombination proteins [BR:cvf03400]
    104290203 (CUL4B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvf04147]
    104290203 (CUL4B)
Ubiquitin system [BR:cvf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     104290203 (CUL4B)
DNA repair and recombination proteins [BR:cvf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104290203 (CUL4B)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104290203 (CUL4B)
Exosome [BR:cvf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104290203 (CUL4B)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 104290203
NCBI-ProteinID: XP_009887578
LinkDB
Position
Unknown
AA seq 887 aa
MFPTGFSSPNPPAAAQEVRPATDGNTSSSSSCKKRKLNNSSNSNSEREEFDSISSCASSP
SKNTSSSSSSVITTSSCSSSGVAASNHHLQKKLRFEDSVDFIGLDVKMAEESSSSSSPAA
SSQQQHQQQLKNKSLLISSVAVGHHANGLTKAASSTVSSFANSKPGSAKKLVIKNFKDKP
KLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICED
HIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD
MGLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQVYQDSFE
HRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEK
QLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIV
INPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKY
VDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAE
KSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGY
WPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVS
LFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLTKSPKGKDVEDGD
KFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSH
NLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgtttcccacaggtttctcttcccccaaccccccagctgcagcccaggaggtcagacct
gccactgatggtaataccagcagcagctcctcctgcaagaagagaaagttaaataatagc
agcaacagcaattctgaaagagaagaatttgattccatttcttcctgtgcctcttctcct
tccaaaaacacctcctcatcatcttcctctgtcatcaccacctcctcgtgctcctcctca
ggggttgccgcctctaatcatcacctccagaagaagctgcgctttgaggactccgtggat
tttattggactcgatgtgaagatggctgaagagtcgtcttcctcctcctctcctgctgcc
tcttctcaacagcagcaccaacaacagctcaaaaataaaagccttttaatttcgtcagtg
gctgtggggcaccatgcaaatggcctgaccaaagctgcctcctctactgtttccagtttc
gccaacagtaaacctggctctgctaagaaattagtgatcaagaactttaaagataagccc
aaattgcctgaaaactacacagatgaaacctggcaaaaactaaaagaagctgtagaagct
atccagaacagtacttcaattaagtacaatttagaggagctctatcaggctgttgaaaat
ctctgctcctacaagatttctgcaaacttgtacaaacaattgagacagatctgtgaagac
cacattaaagcacaaattcaccaattcagagaggattcattggatagtgtcctttttcta
aagaaaatagacaaatgttggcaagatcactgcagacaaatgattatgattagaagtatc
tttttgttcttggatcgaacttacgtacttcagaattcaatgctgccatctatttgggat
atggggctagaattgttcagaactcatataatcagtgatcagaaggttcagaacaaaact
attgatggcattcttctgctgattgagagggaaagaaatggtgaggctattgataggagt
ttactgcgaagccttctaagcatgctttctgacttgcaggtttatcaagactctttcgaa
catagattcttggaagagactaaccgcctgtatgcagcagagggacagaggcttatgcag
gaacgagaggttccagaatatcttcatcatgtcaacaagcgcttggaagaagaagcagac
aggataatcacttatttagatcagagcacacagaagccactaattgctactgtagaaaag
caacttctaggtgaacatttaacagccattcttcagaaaggtttaaaccaccttcttgat
gaaaaccgaattcaagacctgtctcttctgtatcagttgttcagtcgcgtgagaggtgga
gtacaggttctcttgcaacactggattgagtacataaaggcatttggtagcaccatagta
attaatcccgaaaaagacaaaaccatggtccaagaactacttgactttaaagacaaagtt
gaccatattattgatgtttgctttctcaagaatgagaagtttgtaaatgccatgaaagaa
gcctttgaaacattcattaacaaaagaccaaataagccagctgaactcatagctaaatac
gtagattcaaagcttcgtgcaggcaacaaagaagctaccgatgaagaacttgaaaaaatg
ctggataaaattatgataatatttagattcatatatggaaaagatgtctttgaggccttt
tataaaaaagatctagcaaagagactactagttgggaagagtgcatcagtagatgctgaa
aaatctatgctttccaaactcaaacatgaatgtggagctgctttcaccagcaaacttgaa
ggaatgtttaaagatatggagctttcaaaagacataatgatacaatttaaacagtatatg
caaaatcagaatgtacctggcaacattgaactaacagtgaatattctgactatgggttat
tggccaacctacgtgcctatggaggtccacttgcccccagagatggtcaaactgcaggag
attttcaagaccttttatttaggaaaacacagtggtaggaaacttcagtggcagtcaaca
ctaggacactgtgtactaaaagcagaatttaaagagggcaaaaaagaacttcaggtctcc
ttgttccagacactggtgctgctcatgtttaatgaaggagaagagttcagtttagaggag
ataaagcaagccaccgggatagaggacggagagctgagaaggacacttcaatctctggct
tgtggcaaagccagagtactgactaaaagccccaaaggcaaagatgtggaagacggtgat
aaattcacatgtaatgatgacttcagacataagctcttcaggataaagatcaaccaaatt
cagatgaaagaaacggtagaggaacaggcaagcactacagagagagtattccaggaccgg
caataccagattgacgctgcaattgtacgaatcatgaagatgcgcaagacactgagtcat
aacctacttgtgtcagaggtctacaaccagcttaaattcccagtaaagcctgctgacctt
aagaagagaatagaatccttaattgacagggactacatggaaagagataaagaaaacccg
aaccagtacaactatattgcataa

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