Charadrius vociferus (killdeer): 104290261
Help
Entry
104290261 CDS
T08577
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03013
Nucleocytoplasmic transport
cvf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104290261 (UPF3B)
03015 mRNA surveillance pathway
104290261 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104290261 (UPF3B)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104290261 (UPF3B)
mRNA cycle factors
P-body specific factors
104290261 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
DUF6980
Motif
Other DBs
NCBI-GeneID:
104290261
NCBI-ProteinID:
XP_009887641
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MPARDCHLPPSLTKERLEEPLQPLPEHDYFEFFANDSSLYPHMFSRAYINFKNQEDIVLF
RDRFDGYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKDAKTGTIEDDPEYKKFLESYSAD
DEKLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQRE
EERRKWKEEERRKRKEAEKLKKVDRCPEKERDRSKDEPKIKLLKKPEKDEKDLEKKEKSK
KLEKETLREEKNASSASAKRSDGETKEEKAKKSEDECVKDYRDRDRDFERDREYERAQRE
KLRRQEEERRRQKERFEKEKVFRRKEEEVKKERDLLREKGKKSDLTDFTSSTDKSEKVTK
DDKKEDTIKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDSAAKPADQGVDKKQESEPSNT
KEEE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcaagggactgtcatcttcctccatctctgacgaaggagcggctggaggagccc
ctccagcccctgcccgagcacgactactttgagttcttcgccaacgactccagcttgtac
cctcacatgttctcgagagcctacatcaactttaaaaaccaggaagacatagtcctcttc
agggatcgctttgacggctatgtttttgtcgatcacaaaggtcaggaatatgctgccata
gttgagtttgcacctttccagaaagctgcaaaaaagaagagtaagaaaaaggatgccaaa
actggaactatcgaagatgatccagagtacaagaagtttttggaaagttacagtgcagat
gatgaaaaactaacctccactcctgaaactttgttggaggaaatagaggcaagaaacaaa
gagctaatagctaaaaagactactcctttattgaacttcttgaaaaataaacagagactg
agagaagaaaaaagagaggagaggaggaggagggagttggaaagaaaaagacaaagagaa
gaagaaagaagaaaatggaaagaggaggagagaaggaagagaaaagaagcagaaaaactg
aagaaagtagacagatgcccagaaaaagaaagagacagatcaaaagacgaaccaaagatt
aagctacttaagaagcctgaaaaagatgaaaaagacttggagaaaaaagaaaaatccaag
aaactggaaaaagagactctgagggaggaaaaaaatgcgagtagtgcatctgccaaacga
tctgatggggagacaaaagaagagaaggcaaaaaaatcagaagatgagtgtgtaaaggac
tacagggaccgagatagagattttgaaagagacagagaatatgagagagcacagagggag
aaactgagacgccaagaagaggagcgtcggaggcagaaagagcgctttgagaaagagaag
gtttttagaagaaaagaggaagaggtgaaaaaggagagagacttactcagagaaaaggga
aagaaaagtgatcttacagactttaccagcagcacggacaaatctgaaaaagtaaccaaa
gacgataaaaaagaggatacaattaagagggatcgtatcagaaacaaggatcgtccggca
atgcagctgtaccagccaggagcccgaagccgaagcagattgtgtcagtatgaagacagt
gctgcaaagcccgcagatcagggagtggacaagaaacaagagagtgagcccagtaatacg
aaggaggaggagtga
DBGET
integrated database retrieval system
