Charadrius vociferus (killdeer): 104290267
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Entry
104290267 CDS
T08577
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03013
Nucleocytoplasmic transport
cvf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104290267 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
104290267 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104290267 (THOC2)
03041 Spliceosome [BR:
cvf03041
]
104290267 (THOC2)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104290267 (THOC2)
Spliceosome [BR:
cvf03041
]
Complex C
Other components
EJC/TREX
104290267 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104290267 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
104290267
NCBI-ProteinID:
XP_009887646
LinkDB
All DBs
Position
Unknown
AA seq
1580 aa
AA seq
DB search
MRRTMEIVQLCRALSENKSHDSMSFRDIQQALYELAYHVVKGNLKHDQASNVLGDVIEFR
EDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGL
IKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIK
SLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQD
PSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVV
LSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHK
PIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADSFEDLRKEVFNMLCY
LGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSL
MDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLT
KENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCII
EALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLL
ILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHD
LALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRV
PSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVM
APVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQ
EMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKF
LQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEAS
RYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVV
HKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKE
KRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQNGPGGAGMPTSLTIN
TVRLEEGTTEETDKLKEKSQGVVKVINKAVNATPKVTTSNGNSASNSKIIKEKDDKEKSG
KEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDDKAREIKEKTPKSDKEKEKVKKE
EKASKEEKSKTVVTIVESKSTAEKEREKEPSRERDVAKEIKSKENAKGGEKMPVAGSLKS
PVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHYINHTTPTLSKSKER
EVDKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHS
KSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEK
RDSTGGKEEKKHHKSSDKHR
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggacaatggaaattgtgcaactatgccgtgctcttagtgaaaacaaaagccat
gatagtatgagtttcagagatatccaacaggctttgtatgagcttgcataccatgttgtc
aaaggaaacttaaagcatgatcaagcttctaatgttcttggtgatgtcatagaatttcgg
gaagacatgccttccatcctagctgatgtattctgcatattagatattgaaacaagttgt
ttagaagaaaaaagtaagagggatcattttacccaactggtattagcctgtttgtatctt
gtatctgacactgtcctaaaggagcgtttagatccagagacactggagtcattagggctt
atcaagcagtctcaacagttcaatcagaaatctgttaaaataaagacaaaactattttat
aagcaacagaagtttaatttgttaagagaggagaatgaaggttatgcaaagctcattgca
gaacttggacaagacttatctggaaatatcactagtgatttaatccttgaaaatatcaaa
tctttaataggatgttttaaccttgatccgaacagagttttggatattatcctagaagtc
tatgagtgcaggcctgagtatgatgacttctttgtaccactgatagagtcttacatgtac
atgtgtgaacctcaaactctatgccatatccttgggttcaaattcaaattttaccaggat
ccaagtggcgagacaccttcctccttatacagagttgctgctgtccttttgcaacataat
ctcatagatttggaagacctttatgttcatcttcttccaggggataatgccatcattgag
gaacacaagcgagagattgtggaagctaagcaaattgtcaggaaacttacaatggtcgtc
ttatcctctgagaagactgaggaaaaggagaaggaaaaagaaaaagaggaggaaaaaacc
gaaaagcctcctgataatcaaaagcttggtttattggaagctttattaaaaattggtgat
tggcagcatgcacaaagtattatggatcagatgcctccgttttatgctacttcacacaag
cctattgcaattgccctttgccagcttgtacatgtgacaattgagcctctgtaccgcaga
gttggtgtacctaaaggagctaaagggtcacctatttcttctttgccaaacaagagagca
ccaaaacaagcagacagctttgaggacttgagaaaggaagtgttcaacatgctgtgttac
ctcggtcctcatctctcccatgatcccattttatttgcaaaagtggtgcgccttggaaaa
gcatttatgaaagagtttcagtctgatggaagcaaacaagaagataaagagaaaatggag
atactgtttagctgtttgttgagtattaccgatcaagtcttacttccatctctttctttg
atggactgcaatgcatgcatgtctgaggaattatggggaatgttcaaaacttttccatac
cagtaccggtaccgtctttatgggcaatggaagaatgaaacatacaatagtcacccactt
ctagtgaaggttaaagctcaaaccatagaccgagccaaatacatcatgaaacgtttaact
aaggaaaatgtgaaaccttctggaagacaaattgggaagctcagccacagcaatcctaca
attttatttgattatattttatcacaaatacaaaaatacgataacttaataactccagtt
gtggattcactgaaatacctcacttcactgaactacgatgtcttggcatactgtatcatt
gaagctctggcaaaccctgagaaggagagaatgaaacatgatgacactacaatctcaagc
tggctgcagagtctggctagcttttgtggtgcagttttccgaaaatacccaattgaactt
gctggtctacttcaatatgtagccaaccaactgaaagctgggaaaagctttgatttgctt
attttaaaagaggtagtacagaaaatggcagggatagaaattacagaagaaatgacaatg
gaacaattagaagccatgactggtggagaacaactaaaagctgagggtggatactttggc
caaatcaggaatacaaaaaaatcttctcagagattgaaagatgcattattggaccatgat
cttgcccttccgctgtgtctgcttatggctcaacagagaaatggtgtgatctttcaagag
ggtggggaaaaacatctgaagctggtgggaaaactgtatgatcagtgccatgacaccctg
gtacaatttggtgggtttttagcatccaatctaagcacagaggattacattaagcgagtg
ccttctattgacgttctctgtaatgagtttcacacacctcatgatgctgcgtttttcctc
tcaagacccatgtatgcacaccatatttcatcaaagtatgatgaacttaaaaaagctgag
aagggaaataaacagcagcacaaagttcacaaatacattacatcgtgtgagctggtgatg
gctcctgtgcatgatgctgtgatttctctgcaccttcccaaggtttgggatgacatcagt
cctcagttttatgctacgttctggtctttgacaatgtatgaccttgccgtcccacatagt
agctatgacagagaagtcaataagcttaaagtccagatgaaagccatagatgacaatcag
gaaatgccgccaaataaaaagaaaaaagaaaaagaacgttgcacagctcttcaggacaag
ctccttgaagaggagaagaagcagttggagcatgtgcagagggttctacagagactgaaa
ctagagaaggataactggcttctggcaaagtctaccaaaaatgagactatcacaaaattt
ttgcaattatgtatatttcctcgatgcattttttcggcaatcgatgcagtttattgcgct
cactttgtagaactggtgcaccagcagaaaacacccaacttctccacccttctctgctat
gacagagttttctctgatattatatatacagttgcaagttgcactgaaaatgaagctagt
agatatggcaggttcttatgctgtatgctggagactgtgactagatggcacagtgacaga
gtcatatatgaaaaggaatgtggcaactatccaggcttcctaactatattacgggcaact
ggatttgatggtggaaataaagctgatcaattggattatgagaattttagacatgtggta
cacaaatggcactataagctaactaaggcttctgtgcactgtcttgaaacgggcgaatat
acacatatcagaaatatcttgattgtgctgaccaaaatccttccgtggtatccaaaagtg
ctgaacctgggccaagccttggaaagaagagtacataagatatgtcaggaagagaaagag
aagagacctgatctatatgcgttggctatgggctattctgggcagttgaaaagtaggaag
cctttcatgatacctgaaaatgaattccaccacaaagacccacctgccaggaatgctgta
gctgcaacagtacaaaacgggccaggtggtgctgggatgcctacatctctcacaataaat
acagttagactggaagaaggcactacggaggagactgataaactaaaggagaagtctcaa
ggtgtggtgaaagttattaataaagctgtcaatgctacaccgaaggtgacaacaagcaat
ggaaacagtgcttctaatagcaaaattattaaagagaaagatgacaaagaaaaaagcggg
aaggaaaaagataaagaaaaaaaggacaagactccagctgccactccagagatgaaggca
cttgggaaggatgggaaagataaaccaaaggaagaacgggccaacaaagatgataaagca
agagagatcaaggagaagacgccaaaatctgacaaagagaaggaaaaggtcaagaaagaa
gaaaaagcttcaaaagaagaaaaatccaagacagtggttaccatcgttgagtcaaagtca
actgcagagaaggagagagaaaaggagccatccagagaaagagatgtagcgaaggaaatt
aaatccaaggaaaatgctaaaggaggagaaaagatgccagtagctgggtccttgaagtca
cctgttccccgatcagaaacatcagaatctgagagggaacaaaaacgccgcaaagttgat
acacattcttctccatcacattcctcaacagtaaaggacaacctcaacgaactcaaggac
tcttcagcaaagcactacattaaccacactactccaacactgtccaagagtaaggagaga
gaagtggacaagaaagatttggacaagtcaagggagagatccagagagagagagaagaaa
gatgaaaaggacaggaaagatcgaaaaagggatcattcaaacagtgaccgagaggtacca
caggattcaactaaacgacgcaaagaggaaaacgggacaactggttcttcaaaacatagt
aaaagtgaaagtccttctgattcccctcgcttaaatgaaaaggagaaggagaagaacaaa
tcaaaatcttcaggcaaagagaaaggtgattcaattaaagcagaaaagatggagaagagc
tcctctggtagcaaaaaggaatcaagacatgataaagaaaaaacagaaaagaaagaaaaa
cgagacagtactggagggaaagaagaaaagaaacatcataaatcttcagacaagcacaga
taa
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integrated database retrieval system
