Charadrius vociferus (killdeer): 104290273 Help Entry 104290273         CDS       T08577                                  Symbol COL4A6 Name (RefSeq) collagen alpha-6(IV) chain   KO K06237   collagen type IV alpha Organism cvf  Charadrius vociferus (killdeer) Pathway cvf04510   Focal adhesion cvf04512   ECM-receptor interaction cvf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cvf00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104290273 (COL4A6)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104290273 (COL4A6)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104290273 (COL4A6)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cvf04147]     104290273 (COL4A6)    00536 Glycosaminoglycan binding proteins [BR:cvf00536]     104290273 (COL4A6) Exosome [BR:cvf04147]  Exosomal proteins   Exosomal proteins of other cancer cells    104290273 (COL4A6) Glycosaminoglycan binding proteins [BR:cvf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104290273 (COL4A6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  104290273 NCBI-ProteinID:  XP_009887653 LinkDB All DBs Position Unknown AA seq 1729 aa AA seqDB search MGGDFSSFVLEEQRVQSTHKARPGFPRLAPALPAAVGEPRRANSRQLLRALPSSAGGKKS YSGPCGGRDCSAGCKCFPEKGARGRPGPIGLQGAIGAPGFTGPEGLPGAKGERGAVGPPG PAGQKGDKGPMGVPGFQGINGIPGHPGQSGPRGLPGLDGCNGTIGSPGVSGSDGFPGLPG LPGRPGPKGLKGEPVFAQGSLKGMKGENGLPGLDGISGPKGFPGPIGSAGPIGLPGLQGP MGPPGLPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGP QGFPGDKGLPGIPGFGGVGEKGEKGVPGLPGARGLLGLDGSDGIPGRKGHPGIPGYPGLD GVEGMKGELGDIGPPGPPIVIDREGVVISGVPGDPGNPGIPGPPGEEGISGLPGVPGPPG FPGLERDGMGPGGSPGVPGVKGEVGEPGRATIGLPGTPGRGGLPGLPGAPGLPGSPRPSF PPDAILDGRPGAPGEPGQRGLPGALGPKGYKGEAGDCACDGGVTRPGLKGISGLPGPSGS PGVPGIKGIGGDPGTGGAPGLRGPPASAGQQGLPGLKGEKGDSSYATGRGARGDRGATAP RGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGHRGETGSPGVGYPG PSGVRGPPGDPGIDGFPGQAGLPGPPGITLPCIVPGVYGPPGTPGFPGLPGPKGSKGFPG IPGQLGLHGSKGQPGSPGIIGLQGEPGFPGPRGDQGSQGLPGLDGTDGLPGKMGASGLAG MKGAPGDVFGAESGALGEHGRPGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQGNPGY SGVPGLRGPPGPGGPFGIKGKPGPMGAVGLAGAPGCQGLPGVKGVTGDVGPQGPAGMKGF PGLDGAPGSPGERGFLGPPGPFGQQGRPGFSGPKGEKGSSGLLGFPGMPGLPGVPGVNGF KGAPGTAGGKGSPGVVGLQGQKGDRGDVGPPGLPVLGPPEQALQFKGDKGDPGLAGLGGF PGPRGDKGIPGSRGQPGLPGPVGSASKERGLRGDPGFPGPPGQPGLPGQKGVHGIIGFPG MPGERGSDGITGTLGFPGPIGLLGPKGDQGESVGIPGIAGAKGERGDPGFPGERGREGPK GEPGYPGNTGVNGLKGGPGDLGQEGPAGIPGNAGLRGIPGPPGPPGQPGSVGFPGTRGTA GPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEAGLKGPAGLPGPKGEEGSPGLGRGALGFP GPKGSSGDMGLPGPVGLPGLPGKPGISLPSEIRGRPGDAGHPGTDGSSGLPGPPGPRGPP GPASDQGDTGNPGFPGVLGLRGTKGDVGPTGPIGLPGASGFKGIRGEPGLMGMPGKDGPA GDPGYAGLKGEMGRRGLPGRQGAPGITPQPEEVTAPAGLPGLPGIDGVPGFDGDPGFQGP AGKPGAKGLPGRSGLKGRDGFPGSPGIVGDPGPSGVPGPQGFEGVAGKPGSLGLPGMPGR SVGVGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTM PFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSVQIPQYISRCSVCEAPSQAVAVHS QDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGT CHYFANKYSFWLTTVEQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL NT seq 5190 nt NT seq  +upstreamnt  +downstreamnt atggggggggatttttcctcctttgtcctggaggaacagcgggttcagagcacgcacaaa gctcgcccgggcttcccccgcctcgcacccgcgctccccgcagccgtcggcgaacccaga cgtgccaacagcaggcagttactcagggctttaccttcatctgctggtggaaagaagtcc tatagcgggccatgcggcggccgcgattgcagcgctggatgcaaatgttttccagagaag ggtgcgcggggtcgaccaggaccgattgggcttcaaggagcgataggtgcacctggattt actggcccagaaggtttgccaggagcaaaaggtgagagaggagcagtggggccccctgga ccagctggacagaagggtgacaagggcccaatgggagttccaggatttcaaggcatcaac gggatcccaggtcatcctggacagtctggacctagaggtcttcctggcctggacggctgt aatggcaccattgggagtcctggtgtttctggatcagatgggtttcctggcctacctggg ctgcctggtcgtcctggcccaaaaggccttaaaggagaacctgtttttgctcaaggcagt cttaaaggaatgaagggagaaaatggtcttcctggattggatggaatttctggcccaaaa ggctttccaggtccaataggttctgcaggtcctataggattaccaggtttgcagggtcca atgggtccccctgggctaccaggtccaaaaggtaacatgggattaggctttcaaggagag aaaggagaaaagggcgatgtagggctgcctggccctccaggtccccccccatccactgga atactggaattcatgggatttccaaaagggaagcaaggagaaaagggtgagccaggcccc caaggattccccggagacaaaggattgcctggcataccgggtttcggaggtgttggagaa aaaggagaaaaaggtgtgcctggcttacccggtgccaggggtcttttgggactggatgga tctgatgggattccaggcagaaagggtcatccaggtattccaggctatccaggactggat ggagtcgaaggcatgaagggtgaattaggtgacatcggtcccccaggccctcctatcgtt attgacagggaaggtgtagtcatttcaggtgtcccgggtgaccctggaaacccaggaata cctggtcctccaggagaggaagggatcagtggtttaccaggcgttccaggacctccaggg tttccaggcctggagagagatggaatgggccctggagggtctccaggtgttccaggtgtg aagggtgaagtgggagaaccaggaagagcaacgatcggattaccaggcactcccggcaga ggtggtttaccgggtctgccaggagcaccaggattgcctggttcaccacgcccttcattc cccccagacgctatcctggatggaaggcctggggccccaggggagcctggacaaagaggg ctgccaggagctttgggtccaaagggatacaaaggagaggcaggtgattgtgcttgtgat ggaggagttacaagacctggtctaaaaggcatctcaggtctaccaggtccatcaggaagc cctggtgtgccggggattaagggcattggtggagacccaggcactgggggcgcaccagga ctgcgaggccctccggcttcagctggtcagcaaggtcttccaggtcttaagggagaaaaa ggggattcgtcctatgcaacaggcagaggtgctcgtggggaccgtggtgcgacagcaccc agaggaccttcaggcatcccgggaacccctggcagggatggacttccaggcttgccaggt ccgccgggccctccaggtgatggtgggctcggtttcccaggtgaaaaaggactgccagga ttacctggctccaagggccatcgtggagaaactggttctcctggtgttggatatccaggt cctagtggagttcgtgggccaccgggtgacccaggaatagatgggtttccaggacaagca ggtcttccaggacctccaggtatcaccttgccctgcatcgttcctggagtgtatgggccc ccagggactcccggctttccaggattgccaggtcccaaaggcagcaaaggctttcctggc attccaggccaacttggattacatgggtcaaaaggacagccagggtctccaggaataata ggcttgcaaggggaacctggcttccctgggcctcgaggagaccaagggtcacaaggactt ccaggactggatggaacagatggtttgcccgggaaaatgggtgcttcaggcttagctgga atgaaaggagctcctggagatgtatttggtgctgagagtggagccctgggagagcatggc cgacctggactcccaggtgataaagggcttacaggtgatcttggatttccaggaccgaaa gggttagacggaagaccaggcctcctaggtattaaaggcgaacagggtaacccaggatat tcgggtgttcctggattgcggggacctcctggtcctggaggtccttttggcattaaggga aaaccaggacccatgggggcagttggccttgcaggagcaccaggctgtcaaggacttcct ggagtcaaaggcgtgactggggatgtaggtccacaaggccctgctggtatgaaaggcttc ccaggtcttgacggagctccaggatctcctggggaaagaggtttcttaggaccacctggg ccttttggtcaacagggacgtccaggtttctctgggccaaaaggcgagaaagggtcttct ggcctgcttggtttccctggcatgccaggcctgccgggtgtccctggggtgaatgggttt aaaggagctcctggtacagctggaggaaaagggagccctggagttgtgggcctccaaggt caaaaaggtgacagaggtgatgtaggtccacctggtcttcctgtgcttgggcctccagaa caggcactgcagttcaaaggagacaaaggagatcctggattagctggacttggaggattc cctggacctagaggtgataaaggaatcccaggaagccgtggacagcctggtctccctggt ccagttgggtcagcaagcaaagagagaggtcttcgtggtgacccaggcttccctggtcca cctggacagcctgggctgccaggacagaagggtgtacatggtattataggatttccaggc atgccaggagagaggggttcagatggtatcacaggaacacttggattcccaggacctatt ggcctccttggtccaaagggtgaccagggagagtctgttggcattcctggtattgctggc gcaaaaggagagcgaggggacccgggcttcccaggagagagagggagagaaggacccaag ggtgaaccaggctacccaggaaacactggggtgaatggactcaaaggcggcccaggagat cttggccaagaaggaccagcaggaatccctggaaatgctgggctgagaggaatccctggg ccaccaggacctccagggcagccaggatctgtcggattccctggaactcgtggaacagca ggacctaaagggtttcatggatttccgggtttaaatggtctgaatggcttgccaggcaca aaagggtctcctggaacaccaggtctgagtgaagctggactgaaaggccctgcaggtctc ccaggtccgaagggtgaagaaggttctccaggcttgggtagaggagctctaggattccct ggaccaaaaggctcatcaggagacatgggtctccctggtcctgtgggactacctggcttg ccaggaaaacctggaatttctcttccttctgaaatacgtgggagacctggggatgctggt catccaggaactgatgggagttcaggtcttccaggtcctccaggaccacgagggccccct ggcccagcttctgaccaaggtgacacaggcaacccaggtttccctggtgttcttggcttg cgaggcactaagggtgatgtgggacccactggtccaattggactccctggagcatcggga ttcaaaggtataagaggtgagcctggccttatggggatgccgggtaaagatgggcctgcg ggggatcctggttatgctgggctgaagggtgaaatgggacgtcgaggtctccctggtcga caaggggctccaggtataaccccacagccggaagaagtcacagcccctgcaggcttacct ggtctgccaggaattgatggtgtccctggcttcgatggagatcctggattccagggccca gctggaaaaccaggtgcaaaaggtctgccaggaagatctggtttgaaaggacgtgatggt tttcctggatcacctggcatagttggggatccaggaccttcgggtgtcccaggaccacaa ggatttgaaggtgttgctggaaagccgggctcacttggtttgccaggaatgcctggtcgg agcgtgggcgttggatacacgttagtgaagcacagtcagtcagaccaaatcccaccttgt cccataggaatgaataagctctgggacggctacagcttactgtatgtggaggggcaggaa aagtcacacaaccaggatcttggttttgctggctcatgtttgcctcgcttcagcaccatg ccttttatttactgcaacatcaatgaagtgtgctactacgctagccgaaatgacaagtcc tactggctctccaccactgctcccatccccatgatgccagtggacagcgttcagatccca cagtacatcagtcgttgctcagtatgtgaagcaccttcccaggctgtggctgtgcacagc caggacatcaccatcccacagtgtccccttggctggcgcagcctgtggataggatactcc ttcctgatgcacactgcggctggtgcagaaggtggaggtcagtccctggtctcacctggt tcttgcctggaggatttccgtgctactccattcattgaatgcaacggtgctcggggaacg tgccattattttgcgaacaaatacagcttctggctgacgactgttgaacagtcgcagcag tttgtcagtgctcctccctcagaaactctgaaagcgggacagcttcggacaagggtcagc cgttgccaagtgtgcatgaagaacttgtag

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