Charadrius vociferus (killdeer): 104290308
Help
Entry
104290308 CDS
T08577
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03013
Nucleocytoplasmic transport
cvf05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104290308 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104290308 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104290308 (NUP98)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104290308 (NUP98)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104290308 (NUP98)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104290308 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
104290308
NCBI-ProteinID:
XP_009887699
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAAAGLFGSSTATSSTATG
LFGSSTTNTSFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FFGNTSTLGQPNTNTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGVG
GSTLFGNKPAGFGTTTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTGF
GTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAAQ
QAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQSAGSAKSHLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLNSSNLFSPVNRE
NEDLASPSEYPENGDRFFLSVPPDENHRQDGEREEDDDQHEVTRFYTNPIAKPIPQTPEN
AVHKHQNSVDDTIVALNMRVALRNGLEGSSEDASFHDDSLQDEREEESEAVHHLHPAGIV
LTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYFEGEVNLTNLNLDEIVHIR
RKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLEAV
SRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPSKVDTKKLKTTPVPPPGHL
PPQQMTLNGKPTPPAQTPEVEQLGRVVELDSDMADITQEPPQESIGEDNMIEEPEAVPAS
THIASTLGINPHVLQIMKASLLADEDDLDLILDHYPGKQPAKMDTSQEICSPRLPISKSQ
GQKRCSVGGLLQSKFANVIFQPPSAALQDLKGPRTSSSPPSVALWSATSPLASAFSVPPS
VPEVQMKTVGVRRQQGLVPLEKSITYRKGKLLMDMALFMGRSFRVGWGPNWTLVNCGDQL
SVSSEMEELQCESVEYGFLPTPVAPKSLSESSFKVHVEKLSLEQRKMDRDKQLYLIPLEI
KLKHSTVHMDEQCPLLAPNSGVSAIHDYADWVRKASEDPAVTETVVKHWGLTWTLCEAIW
GNLKELEASLEEPSEYILALERRKAFSRWLSETAAGRIEEEVSLSRHGNHVEAVFSCLTG
KRIGEACRLAQQSGDHRLALLLSQLAGSQPLRDLLTMQLVDWHRLQADCFIQEERLRIFA
LLAGKPVWQLSERISINVCSLLDWKRCMAVHLWYLLPPTASVSKALAMYESAFQNTPECE
KYACCPLPPYLEDSGCVIEEDDNAGRPLRDVCFHLLKLYSDRHYDLDQLLDPRSVTSDPL
DYRLSWHLWEVLRALNYTHLFKQSQGVLNASYAAQLESEGLWEWAVFVLLHEPDTHIREK
AVRELLNRHCALSETPESWAKETFLTQRLCVPPEWIHEAKAVRARMEGDKHKEALFLFKA
GHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSALIQDWEMAGLVYLDYIRVI
EMLDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHNAKDRLAQSDMAKRITNLLRVVLS
LQHAPEPVSDSTPDLQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVVTH
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggaactccatttggaggcagcactggctttgggacaacttca
acttttggacaaaatgctggctttggtactacaagtggaggagcatttggaacatcagcc
tttgggtcgaacaataatactggaggcctctttgggagtacacagacaaaaccaggagga
ttatttggttcaacaacatttaatcagccagccacctcctccacaagcactggctttgga
tttggaacgtcgactgggacatcaaatagcctttttggaactaccagcactggtggaggc
ctcttctcatcccagaataatgcctttgcacagaataagccagcggggtttggaaacttt
ggaactagcaccagcagtggaggtctctttggaaccactaacactacttccaatcctttt
ggaagtacgtctggctctctttttggcccaactagtttcaccgctgctccaactggcacg
actattaagtttaatccaccaaccggtaccgatactatggtgaaatctggagttagcaca
aacatcaataccaagcaccagtgtatcactgctatgaaagaatatgaaagcaaatctctt
gaggagctccgtttagaagactaccaggcaaataggaaagggccctccaatcctgtagga
gcgggagcagctgcaggcttgtttgggtcttctacggcgacatcaagtacagccacagga
ctttttggctcttctactactaacaccagcttttcatacggacagaacaaaactgctttt
ggaaccagcacgactggctttggaacaggaacgacagggggtctttttggtcagcaatct
caaactacgagtctgtttaacaaaccgtttggtcaagccacaacaacgcagaacaccggc
ttttttgggaataccagcactctagggcagccaaacacgaacacaatgggtctctttggg
gtaacccagccctcacagcctggaggcctttttggaacagctgccaatacaaatgctggt
actggatttggaaccggaactggtctttttggacaagctaacacaggatttggtgttggc
ggttcgaccctgtttggtaacaagcctgctggatttggaaccaccacgaccagtgctccc
tcgtttggtacaaccactggcggcgggctctttggttttggtgccaatactgctggaaat
agtttgtttggaaataagcccgcaactgggactctgggaacggggcttggaacaggattt
ggaacagctctcggggcaggacagacgtctttatttggaaacacccagcctaaacttggt
ggaaccctgggaacaggagcgtttggagcaccaggattcaatacatcaacagctactctg
ggctttggagcccctcagcctgctgtagcactgacggacccaaatgcatcagctgcccag
caagctgtcctccagcagcatctcaatagcctgacttactcaccctttggagattctccg
ctcttcagaaaccctatgtcagacccaaagaagaaggaagagagactgaaaccaactaac
ccagcagctcagaaggccttaacgacacccacccactacaagctgactccgcgtccagcg
accagagtgcgaccgaaagctttgcagtcagctggctctgctaaatctcatctctttgat
ggtcttgatgacgacgagccttccctgtccaatggtgcattcatgccaaagaagagcatt
aaaaagttggttttgaagaatctcaacagtagcaatcttttctcacctgttaatcgtgaa
aatgaagacctggcttctccatcggagtatccagagaatggagatcggttcttcttgtca
gtacctcccgatgaaaaccacagacaagatggtgagcgagaggaggatgatgatcaacat
gaagtgacgaggttttacactaaccccattgccaagcccatcccacagacgccagagaac
gctgtgcacaaacaccagaacagcgtggatgataccattgtggctctgaatatgcgggtg
gccttgcgaaatggtctggaaggcagcagcgaggatgcctcgtttcatgatgattccctt
caggatgagcgcgaagaggagtctgaagcggtgcatcatctgcatcctgcaggaattgtt
ctgacgagagctggctattacaccatcccgtccatggaggagctagctagatttaccaat
gacagaaatgaatgtattgtgacagacttcaccataggccgcaaaggttatggatcaata
tactttgaaggagaagtaaatctaactaacttaaatctggatgagattgtacatatccgt
agaaaagaagttattgtttaccctgacgatgaaagaaaaccaccgattggtgaaggttta
aatagacgagctgaagttactttagatggagtctggcctacagataaaacatctcgctgc
ctgataaaaagccctgaacgactggccgagatgaattatgaaggtaggctggaggctgtg
tctcggaagcagggcgctcgattcaaggaataccgcccagagacgggatcttgggtgttc
aaggtggcacacttttccaagtatggcttgcaagattcagatgaggaagaggaagagcat
ccttcaaaagtggacacaaagaagttaaaaactacacctgtgccacccccagggcacctg
ccgccccagcaaatgaccctaaacggcaagccaacacctccggctcagaccccagaagtg
gagcagctgggcagggttgtggaactggacagcgatatggcggacatcacccaggagcct
ccccaggagtccattggggaagataacatgatagaagagccagaggcagtgcctgcttcc
actcacatcgcgtcaaccttgggtattaacccccatgtcttgcagattatgaaagcttcc
ttgcttgccgatgaagatgacctagacttgatcctggatcattatcctgggaagcaacct
gcaaagatggatacttcacaagagatctgttctccgaggctccctatttcaaaatcacaa
ggacagaaaagatgctcagttggcgggctgctgcagtcaaaatttgctaacgtaattttc
caaccaccaagtgctgctctgcaagatctcaagggccccaggacttcgagcagtcccccg
tctgttgccctttggtcggcgacttctccattagcgtctgcgttctctgtaccaccgtca
gtccctgaggtacagatgaaaacagttggtgtccgcaggcagcaggggctggtaccgctg
gagaagtccatcacctacagaaaagggaagctactgatggatatggcactcttcatgggg
cgctcatttcgtgttggttggggacccaactggacgcttgtcaattgtggagatcagttg
agtgtatcaagtgaaatggaagagcttcagtgtgagtctgtggagtatggattcctgcca
actcctgttgctccaaaatcactctcagaatcctctttcaaggttcacgtggagaagctg
agcttagaacaacggaagatggacagagacaaacagctgtatctcatccctctggagata
aagctgaaacacagcactgtccatatggatgaacaatgtcctcttctagcgcccaactca
ggagtttctgctattcacgactacgctgactgggttaggaaggcatccgaggatcctgct
gtgacagaaactgttgtgaagcactggggcttgacgtggactttatgtgaagcgatttgg
gggaacttaaaggagttagaggccagcttggaggaacccagtgaatacatcctagccctg
gagcgcaggaaagccttctctcgctggctgtcggagactgctgcaggacgaattgaggag
gaagtctctctgtcccgacatggtaatcacgtagaggctgtgttcagctgccttactggg
aagagaatcggtgaagcttgcaggctggcacagcagtcaggtgaccacaggctcgctctg
ctcctctcccagctggccggcagccagccccttcgggacctcctcaccatgcagctggtg
gactggcacaggctgcaggcggactgcttcatccaggaagagaggttgcggatctttgcc
ctgctcgcaggaaagccagtgtggcagctatcagagagaataagtatcaatgtgtgctcg
ctgctggactggaagcgttgcatggctgtccacctctggtacctgctgcctccaacagct
tcggtgtccaaggcactggccatgtacgagtcagcgtttcagaacacaccagagtgtgaa
aaatacgcctgctgtcctctgcctccatacctagaagattctggttgtgtaattgaagaa
gacgataatgcaggaagacctctgagagatgtctgtttccatttgctaaagctctacagt
gacaggcactatgatctcgaccagctgcttgatcccaggagtgtaacgtctgaccctctg
gactatcgtctcagttggcacctgtgggaagtgctccgagccctgaactatacccatctg
ttcaagcagagtcaaggagtgctgaacgctagctacgctgcccagctggaaagcgagggt
ctttgggaatgggctgtttttgtactcctgcatgagcccgatacgcacatacgggagaag
gcagtgcgtgaactcttaaatcggcattgcgctctctccgagacaccagagtcttgggcc
aaggagacttttctgacgcagaggctctgcgtccccccggagtggattcatgaagcaaag
gcagttcgagcgaggatggagggcgacaagcataaagaagccctcttcttgttcaaggct
gggcactggaaccagtgtcacaagctggttgtcaggcacttagcctcagatgctatcatt
aatgaaaactacaagtacctgaaaggattcctggaagatcttgcccctccagagcgtagt
gcgctcatccaggactgggagatggcagggctggtctacctcgattacatccgtgttatt
gagatgctcgataggattcaacagctggattgttccacctatgagctggagcggttacat
accaaagtgacgtcgctgtgcaacaggatagagcagatccagtgccacaacgcgaaggac
cgcctggctcagtcagatatggccaagcgcatcactaacctgctgcgggtggtcctcagc
ctgcagcacgccccagagcccgtctccgactccacgcctgacctgcagcgcgtccctctt
cgcctgctcgctcctcacatcggccggctgcctatgccggaggactatgccttggaggag
ctccgcagcctcacccagtcttacctccgggagctgacagtggtgactcactga
DBGET
integrated database retrieval system
