Charadrius vociferus (killdeer): 104290378
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Entry
104290378 CDS
T08577
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104290378 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104290378 (APEX1)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
104290378 (APEX1)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
104290378 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
104290378
NCBI-ProteinID:
XP_009887776
LinkDB
All DBs
Position
Unknown
AA seq
159 aa
AA seq
DB search
TAEFPAIYVVAAYVPNAGRGLTRLDYRQRWDVAFRAYLTRLDSQKPVALCGDLNVAHQEL
DLRHPGPNRRSAGFTAEEREGFGSLLAAGFLDSFRHLYPTLPHAYTFWTYLGGARQRNVG
WRLDYFVLSRRLEGALCDSKIRSRVLGSDHCPITLYLAL
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
acggccgagttccccgccatctacgtggtggccgcttacgtccccaacgccggacgaggt
ttaacccgattggactaccgtcagaggtgggacgtggccttccgggcatatctgactcgt
ttggattcccaaaaaccggtggccctttgcggcgacctcaacgtcgcccatcaagaatta
gatctccgccatcccggtcccaaccgtcgctcggccggcttcacggcggaagaacgggaa
ggtttcggatctctcttggccgccggttttttggattctttccgtcatctttaccccact
ttgccccacgcgtacaccttctggacctacttggggggcgcccgccaacgcaacgtgggc
tggaggttggattatttcgtcctctcccgtcgtttggaaggggcgttgtgcgacagtaag
atccgctcccgggttttgggaagcgatcactgtcccatcaccctctacctggcgctctag
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integrated database retrieval system
