Charadrius vociferus (killdeer): 104290425
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Entry
104290425 CDS
T08577
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104290425 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvf04147
]
104290425 (COPA)
Membrane trafficking [BR:
cvf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104290425 (COPA)
Exosome [BR:
cvf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104290425 (COPA)
Exosomal proteins of bladder cancer cells
104290425 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
104290425
NCBI-ProteinID:
XP_009887819
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEGSLPLLFWLSSPAIMICNRKLESLCNIHEN
IRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRP
RVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKT
RFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLY
LITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGL
DEEAESLKETFDPEKETIPDIDHNAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGK
GGALAADIDIDTVGTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLD
LPPELDVPAGPAGAAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQV
GVTNFGPYKQLFLQTYARGRTTYQALPCLPTMYGYPHRNWKEAGLKNALPAVGLKLNDLI
QRLQLCYQLTTAGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSME
IERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARR
LLELGPKPEVAQQTRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPL
SGACYCPEFHGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagactaagtcggcccgggtgaaagggctcagctttcaccctaag
cggccgtggatcctcactagcctgcacaatggcgtcatccagctgtgggattatcggatg
tgcacccttatcgacaaattcgacgagcatgacggacccgttcgaggtattgatttccac
aaacagcagcctctgtttgtctctggaggtgatgattacaaaataaaggtctggaattac
aaattgcgccgttgtctcttcactctgcttgggcacttggattatattcgcactaccttc
ttccaccacgaatatccctggatcttgagtgcttctgatgaccagaccattcgggtttgg
aactggcagtccagaacttgtgtttgcgtgctgacaggacacaaccactatgtgatgtgt
gcccagtttcacccctctgaggacctggtagtgtcagccagcttggatcagactgtgcgc
gtttgggatatttctggcctaaggaagaagaacctgtcccctggagctgtggaatcggat
gtcaggggaataacgggggtggatttgtttgggacaacagatgcggttgtgaagcatgtt
cttgagggccatgatcgtggggtgaactgggctgccttccaccccacaatgccacttatt
gtgtccggagctgatgatcggcaagtgaagatctggcggatgaacgaatcgaaggcctgg
gaggttgacacttgccggggacattacaacaacgtctcatgcgctgtctttcacccgcga
caggaattaatcctcagcaattcagaagacaagagcatccgtgtatgggatatgtctaaa
cgcacgggtgtccagacctttcggcgtgatcatgatcgcttttgggtattggctgctcat
cccaacctcaacctctttgctgcaggccatgatggtggcatgattgtgttcaaactggag
cgcgagcggcctgcatatgctgtgcatggcaacatgttgtattatgtgaaggaccgtttc
ctccgccagcttgacttcaacagttcaaaagatgttgctgtcatgcagctgcgaagtggt
tccaagttccctgtgttcaacatgtcatacaacccagctgagaacgctgtccttctctgc
acaagagccagcaacttagagaacagtacttatgacctatacaccattcccaaggatgca
gactcccagaatccggatgcccctgaagggaaacgttcctccgggctaacagctgtgtgg
gtagctcgtaaccgctttgcagtcctggatcgcatgcattcgatcctaatcaaaaacctg
aagaatgagatcacgaagaaggtgcaggtgccgaattgtgatgagattttctatgctggc
acggggaacctgttactgagggatgcggactccatcaccctctttgacgtgcagcagaag
cgaactctggcctcggtgaagatctccaaggtgaaatacgtcatctggtcagcagacatg
tcccatgtagctctgctggctaagcatgagggttccctacccttactcttttggctttcc
tctccagccatcatgatctgcaacagaaagctggagtctctgtgtaatatccatgaaaac
attcgcgtcaagagcggtgcctgggacgaaagcggtgttttcatctataccaccagcaat
cacatcaaatacgctgtcaccacgggggatcatggaattatccgcaccctggacctgcct
atctacgttacccgcgtgaaggggaacaacgtgtactgcctggacagagagtgccgcccc
agggtcctcactatcgatcccacagaattcaaattcaagctggcattgatcaacagaaag
tacgatgaggtgctgcacatggtgaggaacgctaagctggtgggccagtccatcattgcc
tacctgcagaaaaagggctacccagaggttgccctgcactttgtcaaggatgagaagacc
cgtttcagcctggcactggagtgtggcaacattgagattgctttggaagcagccaaagct
ctggatgacaagaattgctgggagaaactaggagaagtggccttgctgcagggaaatcac
cagattgtggagatgtgctaccaacgcaccaagaactttgataggctctccttcctctat
ctcatcactggcaatctggagaagcttcggaagatgatgaagatagctgagatccgtaaa
gatatgagcggccactaccagaatgccttgtatctaggagatgtggcagagagagtgagg
atcctgaagaactgtgggcaaaagtccctggcctatctcacagctgcaactcatggtctg
gatgaggaagctgaaagcctgaaggaaacatttgatcctgaaaaggaaacgattccagac
attgatcacaatgcaaagctgttgcagcctcctgctcctgtcatgcctctggataccaac
tggcctttgctgactgtctccaaggggttcttcgaaggaacaattgctagcaaaggcaaa
gggggggccttggctgctgatattgatattgacactgttggcactgaaggctggggagaa
gatgcggagctgcagctggatgaagatggctttgtggatgctggagaaggctttggagag
gaaggtctgggtaaaggacaggaagaaggaggtggatgggaagttgaagaagatttggat
cttccccctgaactggatgttcctgctggtccagcaggagcagcagaggatggattcttt
gtgccgcccaccaagggcacaagcccagctcaggtgtggtgtaacaattctcagcttcct
gttgaccacattctggcaggctcctttgagacagcaatgagactcctccatgaccaggtg
ggagtaacaaattttggaccctacaagcagttgttcctgcagacttatgcccgtggccgt
acgacctaccaggctttgccatgtctccctaccatgtacggatacccacatcgcaactgg
aaagaagctggcttgaagaatgccctccctgccgttggcctgaaactcaacgacctcatc
cagcgcctgcagctctgctaccagctcactacagctggtaagtttgaggaggccgtggag
aagttccgctccatcttgctcagcgtgcctttgctggtggtggacaacaagcaggagatt
gctgaggcccagcagctgatagccatttgccgggagtatatcgtaggactctcgatggag
attgagcggaagaagctgcccaaagagaccctggagcagcagaagcgaatctgtgagatg
gctgcctatttcacccactccaacctgcagcctgtccacatgatcttggtgctgcgtact
gctctcaacctctttttcaaactcaaaaacttcaagacagctgctacttttgcccgtcgg
ctgctggagctgggtccaaagcctgaggtggcccaacagactcgcaagatcttgtcggca
tgtgagaagaatcccactgacacctaccagctcaactatgacatgcacaacccctttgac
atctgtgccgcctcttaccgacccatctatcgtggcaaacccgtggagaagtgtccgctc
agtggagcctgctactgccccgagttccacggccagatctgccgtgtcactacggtgacg
gagatcgggaaagatgtcattgggctgcggatcagcccactccagttccgctag
DBGET
integrated database retrieval system
