Charadrius vociferus (killdeer): 104290464
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Entry
104290464 CDS
T08577
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04120
Ubiquitin mediated proteolysis
cvf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104290464 (UBE4B)
04120 Ubiquitin mediated proteolysis
104290464 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104290464 (UBE4B)
Enzymes [BR:
cvf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104290464 (UBE4B)
Ubiquitin system [BR:
cvf04121
]
Ubiquitin ligases (E3)
U-box type E3
104290464 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
104290464
NCBI-ProteinID:
XP_009887862
LinkDB
All DBs
Position
Unknown
AA seq
1261 aa
AA seq
DB search
MTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQ
VDVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIF
LNSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQSRDENPFASLTATSQPIAAAARSP
DRSLMLNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPTTNFTSYVPMTGSSLTPPASS
VATPSVPSITVSSHLTATSPSWMQPSSPSSPSPPAMAASPPAMPVTASRQRPTTMGPPLF
TASPSTLRRRSSLLNRIPSSIYDNPFSLLLLAVSDVSEDSSDEENEDDDFSCVQFGSSMG
GSGSSSVSDSCSDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMCSQPTVSQLLSNIR
SQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVFKQIFI
PILQGLAAASKECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLWLPKSLSTGA
GRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHYLELARQELF
KILHSILLNGETREAALNYMAAIVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKI
KLETVDPMYIFHPRCRIDLPTDETRVKATMEDVTAWIAELCRDPSPFSEPKFPTECFFLT
LHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLK
KLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRILDPAYPNIKLPLTPEVPKVFAALP
EFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMT
NPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFK
SLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQW
DLLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAML
NFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKE
LFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLM
TDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDKQNAD
H
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaccccagctacctctccaatcggtgcatcaggagtagcccaccgaagccagagcagc
gaaggagtgagttctctcagcagttctccatctaacagccttgaaacacaatctcagtct
ctctctcggtctcagagcatggatattgatagtgtctcctgtgagaaaagtatgtcccag
gtagatgtggattcaggaattgaaaacatggaggttgatgagaatgatcgcagagagaaa
aggagtctgacggataaggaacctctgtctgggtcagaagtatctgaggagcaagcttta
cagctggtctgtaagatcttcagagtctcttggaaggaccgagacagagatgttatcttt
ctgaattcgctctctgcccagtttaagcagaacccaaaggaggtgttttcagattttaag
gacttgattgggcagattttgatggaagtgctgatgatgtccacccagtcgagggatgaa
aacccgtttgctagcctgacagctacatcgcaaccaattgctgcagctgcccggtctcct
gacagaagcctgatgttaaacatgggctccaacccaggaagcagccctatgttctgtaat
gtgggctcctttggttccagttcgttatccagtctctatgggactagtccagctcctact
accaatttcacaagctatgtaccaatgactggttcatctcttaccccaccagccagttca
gttgccactccatctgtgccttccattactgtcagctctcacctcacagcaacaagccct
tcctggatgcagccttcctctccgagttcaccaagtcctccagccatggctgctagccct
ccggccatgccagtcaccgcatccagacagagacccacaacaatgggtccacctttgttt
actgcttcacccagtaccttgcgcaggcgttcttctttactgaacaggattccttctagt
atatacgacaaccctttctccctcctccttcttgccgtttctgatgtgtctgaggacagt
agtgatgaagaaaatgaagatgatgatttttcttgtgtccagtttgggtccagtatggga
ggctctggcagctcaagtgtttccgattcctgcagtgaccacttcaccattgaaaattgt
aaggagacagagatgctgaactacctcattgagtgttttgacagagttggaatagaggag
agaaaagcaccaaagatgtgtagccagccaacagttagccagttactgagcaacatccga
tcacagtgcatttcacacgctgctttggtgctacagggatccttaacacaaccaaggtca
ttgcagcagcagtctctgctggtaccgtatatgctgtgtaggaatctcccatttggcttc
atccaagaattggtgagaacaacttatcaggatgaagaggtgttcaaacagatctttatt
cccatcttacaaggcctggctgcagcttccaaagagtgctcccttgatagtgacaatttt
aaatacccccttatggcactatgtgaactttgtgaaatcaagtttgggaaaacacaccct
atgtgcagtttggttgtgtctttgcccttgtggttgcctaaatctttaagcacaggtgca
ggaagagagctgcaaagactttcctatcttggagccttcttcagtctctctgtctttgct
gaagatgataacaaagtagttgaaaagtacttctcagggcctgcgattactcttgaaaac
acccgggttgttagccagtctttgcaacattacctggaattagcaaggcaagagctgttc
aagattctacacagtattttgctgaatggtgaaactcgagaagcagctctcaattacatg
gcagctattgtcaatgccaacatgaaaaaggcgcaaatgcagacagatgatcgtttggtt
tctacagatggctttatgctcaacttcttatgggtactacagcaactaagtacgaagata
aagctggaaacggttgatcccatgtacatatttcatcccaggtgtcgtattgacctccca
acagacgagacaagagtgaaagcaacaatggaggatgttacagcctggattgctgaactt
tgcagggatccgtctccattttctgagccgaaattcccaacagaatgtttcttcctaacc
ctgcatgcccatcatctctcaatcttgccaagctgccgtcggtacatacgtagactgcgg
gccatcagggaactcaacaggactgttgaagatttgaaaaacaatgaaagtcaatggaag
gattctcctctggctaccaggcatcgagaaatgctgaaacgttgcaagacacagcttaag
aaactggtgaggtgcaaggcttgtgcggatgcaggtttgctggatgaaaactttctcagg
agatgtctgaatttctatggcatggtgattcagctgatgcttcgcattcttgaccctgcc
tatcccaacataaaattgcctttaactcctgaggttccgaaggtatttgcagcattgcca
gagttttacgtggaagatgttgctgaatttttattttttattgtacaatatgctcctcag
gtgctttatgagccctgtactcaggacatagtgatgttccttgttgtgatgctgtgcaac
cagaactacatccgaaatccttatttagtagccaagctggtggaagtgatgttcatgaca
aatccagctgttcagccccggacgcaaaagttctttgaaatgattgagaatcatcccctc
tccactaaattgttagtcccctccttgatgaagttttacacagatgttgaacatactgga
gccactagcgaattctatgacaagtttacaatccgctatcacatcagcaccattttcaaa
agcctctggcagaatatagctcaccatggtacatttatggaagagttcaactctgggaag
cagtttgttcgctacatcaacatgctgataaatgacacaactttcttgctggatgagagt
ctggagtccctaaaacgtatccatgaagtgcaagaggagatgaagaataaagagcaatgg
gacctgctgcccagggatcagcaacaggctcggcaatcgcagctagctcaggatgagcgt
gtgtctcgttcatatcttgccctggcaacagaaactgttgatatgttccatatccttacc
aagcaggttcaaaagccttttctcagacctgaacttggaccgcgactggctgctatgttg
aactttaacttacagcaactgtgtggccccaagtgccgtgacctgaaagtcgaaaaccct
gagaaatatgggtttgaaccaaagaagctgttggaccaactgactgacatttatctacag
ctagattgtgctcgctttgctaaagcaattgctgatgatcagaggtcctacagtaaagag
ctctttgaggaggttatctcaaagatgagaaaggctggaatcaagtcaactatagcaata
gagaaattcaaactgctggcagagaaagtggaggaaattgttgccaagaatgcccgtgca
gaaattgattacagcgatgctccggatgaattcagagatccacttatggacactctgatg
actgatcctgtgaggttgccgtccgggactattatggacaggtcaatcatcctgcggcat
ctgttgaactcttccactgatcctttcaatcgtcagacgctgacagaaaatatgctggaa
ccagtgccagaacttaaagagcaaatccaagcctggatgagagacaagcagaacgctgac
cattaa
DBGET
integrated database retrieval system
