Charadrius vociferus (killdeer): 104290536
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Entry
104290536 CDS
T08577
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvf04515
]
104290536 (CLSTN1)
Cell adhesion molecules [BR:
cvf04515
]
Cadherins
Cadherin related
104290536 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
V_ATPase_I
PFF1_TM
SID-1_RNA_chan
Cadherin_C_2
Neur_chan_memb
Piezo_TM1-24
Zip
Motif
Other DBs
NCBI-GeneID:
104290536
NCBI-ProteinID:
XP_009887950
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MAAAPHHFNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGE
ICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQAYDCGKGPDGANAK
KSHKATVHIQVNDVNEYAPVFKEKSYKATAIEGKRYDNILKVEAVDADCSPQFSQICSYE
IVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAEDVLVKISIKPTCKP
GWQGWSKRIEYEPGTGSLALFPSMRLETCDEPITSIQATVELETNHIGKGCDRDTYSEKS
IHRLCGAASGTAELLPPPSSAANWTIGLPTDNGHDSDQVFEFNGTQAVKIPDGVVTVNLK
EPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYALYVHNCRLVFLFRQDPSEGKTYKP
AEFHWKLNQVCDKEWHHYVLSVEFPAVTLYVDGVSYDPFPVTEDYPLHPSKIETQLVVGA
CWQEYAGNENDNETVPETSAGGELHMAQFFRGNLAGLMIRSGKLENKKVIDCLYTCKEGL
DLQMADGVGKGVKIHMNPSQSTLTVEGDDIDRVDKAMQHISYLNSRQFPTPGIRRLKITS
VVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEFESSEGVSLFPELRII
STITREVEPEGDGDEDPTVQESLVSEEIMHNLDTCEVTVLGEELNQEQESLEIDMTRLQQ
KGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHTVSLFDRKFKLVCSELNGRYVSNE
FKVEVNVIHTANPVEHANHIAAQPQFVHPVHHTFVDLSGHNLANPHPFSVVPSTATVVIV
VCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSE
EEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQLEWDDSTLSY
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctccccatcactttaacaagcataagccatggattgaaacgacctatcat
ggtatagttacagaaaatgacaacacggtgctcttggacccccctttaatagccctggac
aaagatgcgcctctgcgttttgcagagagttttgaggtgacagtcaccaaagaaggtgag
atttgtggatttaaaattcatgggcaaaatgttccctttgaagcagtggtagtggataaa
tccactggtgagggaataatacgctctaaagaaaagcttgactgtgaactacagaaggac
tacacgttcaccatacaggcctatgactgtggaaagggaccagatggagcgaatgcaaaa
aaatcccacaaagcaacagtacatattcaggtgaatgatgttaatgagtatgctcctgtg
ttcaaagagaagtcatacaaggcaacagcaattgaagggaagaggtatgacaacatcctg
aaagtggaagcagtggatgcagattgttcacctcagttcagccagatttgcagttacgaa
attgtaactccagatgtacctttcgctatcgacaaagatggttatataaaaaacacagaa
aagttaaactatggtaaagaacatcagtataaactgacagtaacagcgtacgactgtggg
aagaagagagctgctgaggatgtgttggttaaaattagcattaagcctacatgcaagcct
ggctggcaaggttggagcaaaagaatagaatatgagcctggtactggttcgttagcgctc
ttccccagtatgcgtttggagacatgtgatgagccaataacctcaattcaagcaacggtt
gaactagaaaccaaccatattggtaaaggctgtgatagagacacctactctgagaaatcc
attcacagactctgtggtgctgcttctggcacagctgagctacttccccctccaagtagt
gctgctaactggacaataggacttcctactgataatggtcatgacagtgaccaagtgttt
gaatttaacggcacacaagctgtgaagattccagatggcgttgtcacagtcaatctaaaa
gagcccttcatgatttcggtatggatgaggcatgggcctggaaccaaagagaaagagaca
attctgtgcaattcagacaagacagatatgaaccggcaccactacgcgctctatgtacac
aactgccgacttgttttcctcttccgccaagatccttcagagggaaaaacatacaaacct
gctgaatttcactggaagctaaatcaagtgtgtgacaaagagtggcatcattatgtcctc
agtgttgaatttcctgcggtaactctttacgtagatggtgtttcatatgatcctttccca
gtgactgaggattacccacttcatccttcaaagatagaaacgcagctagtggttggagca
tgttggcaagaatatgcaggaaatgaaaatgacaatgaaactgtgcctgagacctctgca
ggtggtgaactccacatggcgcagtttttccgaggcaatctggcgggtttgatgatccgt
tctggtaaactggaaaacaagaaggtgatagattgcctatatacttgcaaagagggactg
gatttgcaaatggctgatggtgttggcaaaggcgtgaagatccacatgaacccaagtcag
tcaacactgactgtagagggggatgatattgacagagttgataaggccatgcagcacatt
tcctatctgaattcccgccagttcccaacacctgggattcggaggcttaaaatcaccagt
gttgtcaaatgtttcaatgaagaggcctgcgtctccattccttctgtggaggggtatgta
atggtcctgcaaccagaggaaccgaaaatcagccttagtggcatcaaccattttgcccgc
tctgcttcagagtttgagagttctgagggtgtttccctctttcctgagcttcgcataata
agcaccattacacgggaggtggagccagagggagatggagatgaagatcccacagtacaa
gagtcattggtatctgaagagatcatgcataacctggatacatgtgaggtgacagtgcta
ggagaggaactaaatcaggaacaagaaagcctggagattgacatgacccgattgcagcag
aaaggcattgagatgagtagttccaacctgggcatgataatcacaggggttgatactatg
gctagttatgaagaagtcttgcatttgatacgctacagaaattggcacactgtttctctc
tttgacagaaagttcaaattagtctgttctgagcttaatggacgctatgtcagcaacgag
tttaaagtggaggtgaatgttatccacacagctaaccctgttgaacatgctaatcacata
gctgcacaaccacagtttgttcatccggtgcatcatacatttgttgatctctctggccac
aacttggctaaccctcatccattttcagttgtcccaagtacagccactgttgtgattgtc
gtttgtgtcagtttcctggtttttatgattattctgggagtgttccgaattcgagctgca
catcagagaacaatgcgtgaccaggatactggaaaggaaaatgagatggactgggatgac
tctgctttgaccatcactgtgaaccccatggagacttatgaggatcaacacagcagcgaa
gaggaagaggaggaagaggaagaagaaagtgaagatggagaagaagatgacatcaccagt
gcagagtctgaaagcagtgaggaggaagagggagagcaggaggaggaccaacagaatgtc
aatagacagcaacagctggaatgggatgactctaccctcagttattga
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