Charadrius vociferus (killdeer): 104290576
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Entry
104290576 CDS
T08577
Symbol
NPHP4
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvf03037
]
104290576 (NPHP4)
Cilium and associated proteins [BR:
cvf03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
104290576 (NPHP4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
104290576
NCBI-ProteinID:
XP_009887991
LinkDB
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Position
Unknown
AA seq
1347 aa
AA seq
DB search
MSLRRREGARTVNAGAEYQLRLSLFDATYHHFFGRTWRSVRRAARAAPPRPTRAAFNETV
YFHTSLKHPGITAVVEVVTTAGKGDGGSQHLSCGFGLIPLFGSGSEATDPATEDRALKLY
HGTPRALLHPRFQDPVEKNKYLTVMEKSHVQYALKPHQPLETIFHLLPENLLMSGLQTVP
GLLPARGDASDCLQKPRLMKPVTCYLERLSVQLYPSLEEFEEELLDLLNSDRLLQANAAP
DGDGVAVRERRLHVGVQGAGQALVLRSRIHLSEMVPHPAFGVCFQLEYVFCSSGGAGGKE
GLSVNAPRLRAGKHVESGTVQFHVSTDSEEHLVTAAEILRKDRDESEKPPTPSLSSPAPL
RMAASPRGPGGKRSSYIGSRGANPRAAGLCRFLAERRCRSTRHLSRFSEARGCGPVSPSR
TLLSRASLARLHTAGFPEILDHNQEPVEISEPADPATFSLRLEEADPLQGNEIILQFLAF
GRRGGSSLDARDGTEGTWPKTVFLTFQFYRFPPVTTPRLQLVSTDGGPAAGTAVPAQLLV
RVNKDGTLGTGPPGLQLKYMVDPAFLRPGEQRWFVRYLAEHSLQIDVWDGDSLLLVGSAA
VKLEPLLRQGRAAVRTHHELEVATTEYEPDVTVMGREALRHGALRPLGVRVVVRGRLHLC
LANIGKSPLLMWPKGLGASAGAPQHVPLAGYLRCHSEPPSRHRLGCGQRRAAPGCACDPF
LPARLEMPAQGGGEAGGAGTIIEAYREHVKGESISRVLSQAITATHTVHAVLGTAEFFEF
ALKNPYGVQHTVTIEVDHPELSVILDPREWRHFKELTKSVTPVEEEMFHLRDDLRPQVYL
RPNETVRIPFKYQTFSADPAVVAAQGPAGLGTGADREKHRSCKTPSSLSRCAPLPAGQVS
FQVSGGKPIALLRVKVEPQPHVVDQTFRFYHPELTFLKKTIRLPPWHTLPGAPVGMLGGE
PEMFVRCSDPDIICETKNMGPGEPQDIFLKVAGGPSPQIKKFFVAIYVDAWLAAPVQIWQ
FYLHSLXTRAPRGPPPRLSLLLRGTPAPRRVRVFTSHPQELEVDPDGAFLLPANGIQDLY
VGVRPRRAGSRFIYLNLVDVESHQLVSSWLLCLSCRQPLISKAFEISLPAGGGRDRFTVV
LNRRSLPRPPRQDRGCSRGTGHGARREPLSSGHGRRLVQERDREPVIYALNYAYRARFPN
EKFPVPTTVAAWGSPTFAGSSSLRPTGTCPDTLSERERPNQAEHELRRQTRHRVSHATGS
SDSRNPPPDGECCFLRQRESDESSESGPIPELEQTHVLRNVHADVRRSRVICVSSSAAPW
ALGWQGSTGLRRRTSAPPGTGTRSRIR
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcggaggagagagggtgcacgcacggtgaatgcgggagccgagtaccagctg
cgcctctcccttttcgacgccacctaccaccacttcttcgggaggacgtggaggagcgtg
cgacgagctgcccgcgctgccccaccgcgtccgaccagggcggctttcaacgagaccgtt
tacttccacacctccttgaagcaccccggcatcaccgccgttgtggaagtggtgacgacg
gccgggaaaggggatgggggatctcagcatctctcctgtggctttggactcatccccctc
ttcggcagcgggtcggaggcgacggacccagccaccgaggacagagcgctgaagctgtac
catgggacgccacgtgccttactgcacccgcgcttccaggaccctgtggaaaagaacaaa
tacctgacggtgatggagaagagccacgtgcagtacgccctgaagccccatcagcccctg
gagacgatatttcaccttcttcccgaaaaccttctgatgtctgggctgcagaccgttccc
ggcttgctgccggcgcgcggagacgcgagtgactgcctgcagaaaccccggctgatgaag
ccggtcacctgctacctggagaggctgtctgtccagctgtacccttccctggaggaattt
gaggaagagctgctggacttactgaacagcgatcgcttactgcaggctaacgctgcgccg
gacggcgacggggtggcggttcgggagcggcggctgcatgtcggcgtccagggtgcgggt
caagccctggtcctgaggagccgcatccacctgagcgaaatggtccctcacccggcgttc
ggggtctgcttccagctggagtacgtcttctgcagctcggggggagccggtgggaaggaa
gggctgagcgtgaacgcacctcgtctccgtgccgggaagcacgtggagtctgggaccgtc
caattccatgtttcaactgattcggaagaacatcttgtaactgctgcggagatcctacgt
aaagacagggacgagtcggagaagccgcctacaccatcgctgagttcgccggccccgctg
cgaatggcggcctccccgcggggacccgggggaaagcgcagcagctatataggaagcaga
ggtgcgaacccacgggcagctgggctgtgccgcttcttggcagagcggcgatgccggagc
acgcggcatctgagccgctttagcgaggcgaggggctgcgggcctgtctcaccttcccgc
acgctgctctcccgtgcctccctggcgcgcctgcacaccgccggcttcccggagatcctg
gaccacaaccaggagccggtggaaatctcggagccggcagacccagcgactttcagcctg
cggctggaggaagccgaccctctgcaaggcaacgaaataatcctgcagttcctggctttt
ggcaggagaggtggcagctctttggatgcccgggacggcacggaggggacgtggccgaag
accgtcttcctcaccttccagttctaccgtttcccgccggtcaccacgccgcggctgcag
ctggtcagcacagatggggggccggcggccgggacggctgtgccagcgcagctcctcgtc
cgggtgaacaaggacggaacccttggcactggaccgccgggcttgcagctgaagtacatg
gtggatcccgctttcctgcgccccggggagcagcgctggtttgtgcggtacctggctgag
cacagcctccagattgacgtctgggatggagactccctgctcctcgttgggtccgctgcc
gtcaaactggagcccctgctgcgccagggccgagcagccgtcaggacccaccacgagctg
gaggtggccacgaccgagtacgagccggacgtgacggtgatgggccgggaggcgctgcgg
cacggtgccctgcggcccctcggtgtccgtgtggtggtgaggggccgcctccacctctgc
ctggccaacattggtaagagcccgctgctgatgtggccaaaaggcttgggtgccagcgcc
ggtgccccgcagcacgtgcccctcgccgggtacctccggtgccactcggagcccccatcc
cggcaccggctgggatgcgggcagaggcgtgcggctcctggttgtgcttgcgatcccttc
ctgcctgctcggctggaaatgccggcgcaaggtggcggggaggccggcggtgcggggacg
atcatcgaagcctaccgggagcacgtcaagggcgagagcatctcccgcgtgctcagccag
gccatcaccgccacccacaccgtgcacgccgtgctggggacggctgagttctttgagttt
gccttgaagaacccctacggcgtccagcacactgtgaccatcgaggtcgaccaccccgag
ctcagcgtcatactggacccgagagagtggcgccacttcaaggaactgaccaagagcgtt
acaccagtggaggaggagatgttccacctccgcgatgacctcaggcctcaggtctacctg
cgccccaacgagactgtccgcatccccttcaagtaccagaccttctctgcagaccccgct
gttgtcgcggcgcaggggccggctgggctgggcaccggtgccgacagggagaagcatcgc
tcttgtaaaactccatcatccctctcccgctgcgcccccctccccgcgggacaggtctcc
ttccaggtgagcggggggaagcccatcgcgctcctgcgggtgaaggtggagccgcagccc
cacgtggtggaccagacgttccgcttctaccacccggagctcaccttcctgaagaagacc
attcggctgcccccctggcacaccctccccggcgcgccggtggggatgctggggggggag
cccgagatgtttgttcgctgcagtgaccctgacatcatttgcgaaaccaaaaatatgggg
cccggagagccgcaggacatcttcttaaaagtagctggaggacccagcccgcagatcaaa
aagttctttgttgctatttatgtggacgcctggctggcggcgcccgtccagatctggcag
ttctacctgcactcgctgnccacccgcgccccgcgcggcccgcccccccgcctctccctg
ctgctgcggggcaccccggccccgcggagggtgcgcgtcttcacctcccacccccaggag
ctggaggtggatccggacggtgccttccttctccccgccaacggcatccaggacctgtac
gtcggcgtgcggcctcggcgggctggcagcaggttcatctacctcaacctggtggatgtg
gagtcccaccagctggtgtcctcctggctgctctgcctgtcctgccggcagcccctcatc
tccaaggcgttcgagatctcgctcccggcggggggcgggagagaccgttttacggtggta
ctaaatcgccgatccttgccgcgacctccgcggcaggaccgcggctgctcccgtgggacg
ggacacggcgcccggcgagagccgctctcctccggccacgggcgaaggctcgtgcaggag
cgtgaccgggaaccagtgatttacgccctgaattacgcctaccgcgcacgcttccctaat
gaaaaattccctgtccccacaactgtggctgcctgggggtcaccgacgtttgccggcagc
tcgtccctgcgccccacggggacctgccctgacacgctcagcgagcgggagaggccgaac
caggctgagcacgagctgcgaagacagaccaggcaccgcgtgtcccacgccaccggcagc
agtgactccaggaatccccctcccgacggggagtgctgctttctacggcagcgagaaagt
gatgagtcgagcgagagcgggcccatccccgagctggagcaaacgcacgtgctgagaaat
gttcacgccgatgttcggaggagccgggtgatttgtgtaagcagctccgccgcgccgtgg
gcgctcggctggcagggctccacagggctgcgccgccggacatcggcaccgccgggcacc
ggcacccgctcccgcatcaggtga
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