Charadrius vociferus (killdeer): 104290578
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Entry
104290578 CDS
T08577
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104290578 (CHD5)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104290578 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
DEAD
HTH_CHD1_Hrp3
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
104290578
NCBI-ProteinID:
XP_009887993
LinkDB
All DBs
Position
Unknown
AA seq
1990 aa
AA seq
DB search
MLGLAGEFWVWGEEDDGVLEGLDEFFAEEQVAVQKKKKSKKLKDGKAAKIKRRKKEGSND
EMTDNEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDEEEDDNEDGGLKEPKS
SAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWR
EFSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQSAMPTVIRKAKTKRPACPGVR
KKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSVRS
ECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPE
LEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTC
PSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAAPLPPALPAPDA
ELPLPPPKVPPLPRCAQAARGSLMPQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQ
REKRKSKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTW
EIDEIDIPYYENLKHLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTV
KFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK
EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS
GKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLN
SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLL
GPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLN
IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVL
IFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGG
LGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKR
KMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAMPDAVTPF
SDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQ
NMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQ
LKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGK
SEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEH
VNGKYSTPDLILEGLESKKSGEIVSSDPNTPVPASPAHMHTGPVALADKIETQLGFQEEK
DQVEQKSRKVSDSQVPASAEKVESEEHPESCDSKEKLREEQQEESEKADPSPEPLVKDEG
IQEKEKPLEKPELSSSPGKGEDKEVKPEDTKAEEKEQSEAQQNGDKEEEEDGKKDDRNVN
FRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLVAGNVTHGYARWQDIQ
NDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNH
PAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPS
MLSRIPPVAARLQMSERSILSRLATRGGDPAVQQGSCSSSQIYNNNFGPNFRGPGPGGIV
NYSQMPLGPYVTAEVRLCSLLSAFRLRESCGNTRAEGRGGGGAVRGLRSGLPPRVLVYAC
GLWLEEPQWV
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atgctgggacttgctggcgagttctgggtttggggagaagaagatgatggggtgctggaa
ggactggatgagtttttcgcggaagaacaagtggctgtgcagaaaaagaagaaatccaag
aagctgaaagatggcaaggctgccaaaatcaagaggaggaagaaggaggggagcaatgat
gaaatgacagataatgaagaggagattgaggagaaatctgagagtgaagggagtgactat
tcccccaacaaaaagaagaagaaaaaactgaaagacaagaaggagaaaaagccaaaacgg
aagaagaaggacgaagaggaggatgacaacgaggatggaggtctaaaggagcccaagagc
tcagcccagctgatggaggagtggggccttgatgatgtagattatgttttctcggaagaa
gattatcatactctgactaattacaaggctttcagccagttcctcaggcctctgatcgcc
aagaagaaccccaagatccccatgtccaagatgatgaccgtgctcggtgccaagtggcga
gagttcagtgccaacaacccgttcaagggcagctcggcagcagcggcggcagcggctgtt
gctgcagctgtagagaccgtcaccgttgccccgccgctcgccgccagcccccagcagtct
gccatgcccaccgtcatcaggaaggctaagaccaagcggccggcctgtccgggtgtgcgg
aagaaaatcaagggctccaaagacgggaagaagaaggggaaggggaaaaagatggcaggc
ttgaaattccggtttggaggaatccccagcaaaaggaaaaagggctcctctagcgaagag
gaggaacgggaggaatccgactttgacagtgccagcatcaacagctcctcagtgcgctcc
gagtgctcggctggcctggggaagagagggaagaggaggagaaagaaaaagaggatcgaa
gaaggggacgggtacgagacagaccaccaggactactgcgaggtgtgccagcagggaggg
gagatcatcctgtgcgacacctgtcctcgtgcctaccacctcgtctgcctggaccccgag
ctggagaaggcccccgagggcaagtggagctgcccccactgcgagaaggagggcatccag
tgggagccgaaggaggaggaggaggaggaagaggaaggcggtgaggaggaggaggacgac
cacatggagttctgccgggtctgtaaggatggaggggagcttctgtgctgcgacacctgc
ccatcctcctaccacctccactgcctgaacccgccgctgccagaaataccaaacggtgaa
tggctctgccctcgctgtacatgccctcccttgaagggcaaagtccaacgcatcctgcac
tgggcctggaaggagccgccggctgccccgctcccgcccgcgctgcctgccccggatgca
gagctgcctctccccccgccgaaggtgccgccgctgccgcgctgcgcgcaggcggcccgc
ggctccctcatgccgcagctggagctctaccacaccgtgatgtaccgcaactaccaacgg
aagaacgacatggacgagccgccagccttcgactacggctctggggatgaggacagccag
agggagaagcggaagagcaaagacccgcagtacgccaagatggaggagcggttctaccgc
tatggcatcaagcccgagtggatgatgatccaccgcatcctgaaccacagctttgataaa
aagggagacatccattacctgatcaagtggaaggacttgccgtatgaccagtgcacctgg
gagatcgatgagatagacatcccctactatgaaaacctcaaacacctctactggaaccac
agggagctgatgctgggggaggacacgcgccctctgaagaagctgaacaagaaagggaaa
aagctgaaagaggagaagctggaaaagcctccagaaacacctctcgtggatcctacagtg
aagtttgacaagcagccgtggtacatcgatgccacgggaggcacgctccatccctaccag
ctggaagggctaaactggctgagattttcctgggcccaagggacagacacaatcctggct
gatgagatggggctggggaagactgtgcagactattgtgttcttgtattccctgtacaag
gagggccactcgaaagggccgtacctggtcagcgcccctctctccaccatcatcaactgg
gagcgcgagtttgagatgtgggcacccgacttctatgttgtgacctacacgggggacaaa
gaaagccggtcggtcatccgggaaaatgagttttcttttgaagacaacgccatccggagc
ggaaagaaggtcttccggatgaagaaggaagcccagatcaagttccatgtcctgctcacc
tcctatgagctgatcactattgaccaggcggtgctgggctccatcgagtgggcctgtctg
gtggtggatgaagcacacaggctgaagaacaaccagtccaaattctttagagtgttaaat
agctacaagatcgattacaagctgctgctcactgggactccgctccagaacaacctggaa
gagctcttccacctgctcaatttcctgactcctgagaggtttaataacctggaggggttc
ctggaggagtttgcagacatctccaaggaggaccaaatcaaaaagctccatgatctgctg
ggtccccacatgctgcggcggctcaaggcggacgtgttcaagaacatgccggccaagacg
gagctgattgtgagagtggagctgagccagatgcagaagaagtactacaaattcatactg
acgaggaattttgaagccctgaattcgaagggtggtgggaaccaggtctcgctgctcaac
atcatgatggacttgaagaagtgctgtaatcacccgtacctctttcctgtggcggcggtg
gaggccccagtgctgcccaacgggtcctatgatggcaattctttggtcaaatcttctggg
aaactgatgctgctccaaaagatgctgaagaagttgcgagatgggggtcacagagttctg
atcttctcccaaatgacgaagatgctggacttgctggaggatttcctggagtacgaaggc
tacaagtacgagcggatagacgggggcatcaccggtggtctgcggcaggaggccatagac
aggtttaacgctcctggtgctcagcagttctgctttctcctctctacccgcgccggcggt
ctgggcataaaccttgctacggccgacacagtcattatttatgattctgactggaatccc
cacaatgacatccaggcattcagcagagctcaccgtatcgggcagaacaagaaggtgatg
atctaccgctttgtgaccagagcctctgttgaagagcgcatcacccaggtggccaaaagg
aagatgatgctcacgcacctggtggtccgcccggggctcggctccaagtcgggctccatg
accaagcaagagctggacgacatcctcaagtttgggacagaagaactcttcaaggatgat
gtggaaggcatggtgtctcagggacagcggatcgccatgccggatgctgtcacccctttc
tctgacacgctgtcaaccaaagggggtgcagtgactcccggcatgaaaaaaaagcacggt
ggcaccccaccaggtgacaataaggacgtggatgacagcagcgtgatccactacgacgac
gctgccatctctaagcttctggaccgaaaccaggatgcgactgatgacacggagctgcag
aacatgaacgagtatctcagctcctttaaagtggcccagtatgttgtcagagaagaggat
ggtgtggaggaggtggaacgggagatcatcaagcaagaggagaatgtggaccccgactac
tgggagaagctgctgcggcaccattacgagcagcagcaggaagatctggccaggaacttg
gggaaagggaagagaatccgcaagcaggtcaactacaacgacgcctcgcaggaggaccaa
gagtggcaggatgagctctctgacaaccagtcggagtactccattggctctgaggatgag
gatgaagactttgaagagaggccagaaggtcagagtggcagaagacaatcccggaggcag
ctgaagagtgaccgggacaagcctctcccgcctttgctggcaagagtcggggggaatatc
gaggttctcggcttcaatgcccgccagcgcaaggctttcctgaacgccatcatgcgctgg
ggcatgccgccccaggacgccttcaactcccactggctggtccgggatctgcgagggaaa
agtgagaaggagttcagagcgtacgtgtctctcttcatgagacatttgtgtgaacctggg
gcagacggtgccgagacctttgcggacggcgttccccgggaagggctgtcacggcagcat
gtgctgactcggataggagtcatgtcactagtaaggaagaaggtccaggagttcgagcat
gtcaatgggaagtacagcaccccagatctgattctcgagggcctggagagtaagaagtcc
ggcgagattgtgtcttcagatcccaacacccctgtcccggccagcccagcacacatgcac
acgggacccgtggctcttgcagacaaaatcgaaacgcaactcgggttccaggaggaaaag
gaccaagtggagcagaagtccaggaaggtgtctgacagccaggtgcctgcgagtgctgag
aaggtggaaagcgaagagcacccagaaagttgcgacagcaaagagaaactgagggaagag
cagcaagaggagagtgaaaaggctgatccttctcccgagcccctggtgaaagatgagggg
attcaagagaaagagaagcctttggagaagccggagttgagcagcagcccagggaaaggg
gaggacaaagaagtgaaaccagaggacaccaaggcggaggagaaggagcaaagcgaagct
cagcaaaacggtgacaaagaggaagaggaggatggaaagaaggatgacagaaacgtgaac
ttccgattcatgttcaacattgctgatggtggctttacagagctgcacacgctgtggcag
aacgaggagagggctgccatctcctccggcaagatctacgacatctggcaccgccgacac
gactactggctggtggcagggaatgttactcacggctatgcccgctggcaggacatccag
aacgacccgcgctacgtgatcctgaacgagccgttcaagtcggagatacacaaggggaac
tacctcgagatgaagaacaagttccttgcccggcgattcaagctgctggagcaggcgctg
gtgatcgaggagcagctgcggagggccgcgtacctgaacatgacccaagaccccaatcac
ccggccatggcattgaacgcccgtctggctgaagtggagtgccttgccgagagccaccag
catctctccaaagagtccctggctgggaacaagcccgcgaacgccgtcctgcacaaggtg
ctgaaccagctcgaggagctgctgagcgacatgaaggccgacgtgacgcgcctgccctcc
atgctgtcccgcatcccgcccgtggccgcccggctgcagatgtctgagcggagcatcctc
agccgcctggccacccgcgggggggaccccgccgtccagcagggctcctgcagctcctcc
cagatctacaacaacaactttgggccaaatttccgaggtcccgggccaggcgggattgtc
aactacagtcagatgcctctgggaccgtacgtgaccgccgaggtaaggctgtgctcgctg
ctctccgcgttccgtttgcgggagtcttgtgggaacacgcgtgcagaggggcgagggggc
ggaggggccgtacgagggctccgctctgggctacctccccgagtgctggtgtatgcctgc
ggcctctggctcgaggaaccgcagtgggtgtag
DBGET
integrated database retrieval system
