Charadrius vociferus (killdeer): 104290626
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Entry
104290626 CDS
T08577
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04137
Mitophagy - animal
cvf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104290626 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104290626 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104290626 (VCP)
03009 Ribosome biogenesis [BR:
cvf03009
]
104290626 (VCP)
04131 Membrane trafficking [BR:
cvf04131
]
104290626 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvf04147
]
104290626 (VCP)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104290626 (VCP)
Ribosome biogenesis [BR:
cvf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104290626 (VCP)
Membrane trafficking [BR:
cvf04131
]
SNARE
SNARE associated proteins
Others
104290626 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104290626 (VCP)
Exosome [BR:
cvf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104290626 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
AAA_18
ATPase_2
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
ResIII
TsaE
NB-ARC
SLFN-g3_helicase
Viral_helicase1
NACHT
Sigma54_activat
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
104290626
NCBI-ProteinID:
XP_009888047
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MVELLMEVMVSETYFAADSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDE
LQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDV
KYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVET
DPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPA
LFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRK
AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATN
RPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVG
ADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETV
VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA
KAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG
NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP
DEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIR
RERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGF
GSFRFPSGNQGGAGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggtagagcttctcatggaagtgatggtctcagagacgtattttgcagctgattctaaa
gcggatgacttatcgactgctattctgaagcagaagaacaggcccaataggttaattgtt
gatgaagccatcaatgaagacaacagtgttgtgtcactgtcccaggcaaaaatggacgaa
ttgcaactgttcagaggagacactgttctgctaaaaggaaagaagaggagagaggcggtc
tgcattgttctgtcagatgatacctgctcagatgagaagattcgaatgaatagggttgtt
cgcaacaacctaagagtgcgcctgggcgacgtgatcagcatccagccttgcccagatgtg
aaatacggcaaacgtatccatgtgctgccaattgatgacacagtagaagggatcacgggg
aatctgtttgaggtctatctcaagccttacttcctggaagcatacagacccatcaggaaa
ggtgacatcttcttggtgcgtggagggatgcgtgcagtggaattcaaagtggtggagaca
gatccaagtccgtactgcatagtggctccggacactgtgatccattgtgaaggagagccc
atcaaacgagaggatgaagaggagtcactgaatgaagtgggctatgatgacattggtggc
tgccggaagcagctggctcaaatcaaagagatggtggaacttccactccgacaccctgcg
ctcttcaaggccataggggtgaagcctccacgtgggatcctgctgtacggtcctcctggc
actggtaaaacactgattgcccgagcagtggccaacgaaacaggggctttcttcttcctg
attaacggtcctgagatcatgagcaagctggctggggagtctgagagcaacctgaggaaa
gcctttgaagaagcagagaagaacgctcctgccatcatcttcattgatgaactggatgcc
attgctcctaagagagagaagacacatggagaggtggaacgtcgcatagtgtctcagctg
ttgactcttatggatggactgaaacagagagcacacgtgatcgttatggcagctaccaac
agacctaacagcattgacccagcactcaggcgatttggtcgttttgacagagaggtagat
attggtatcccagatgccaccgggcgactggagatcctgcagatccatacaaaaaatatg
aaactggctgatgatgtggatctggaacaggtggcaaacgagacccatggccatgttggt
gctgacttggctgctctttgctcagaagctgctcttcaggctataagaaagaagatggat
ctcatagacctagaggatgaaaccatcgatgctgaagtgatgaactcgctggctgtgacc
atggatgacttcaggtgggctctgagccagagcaacccttctgctcttcgggagactgtg
gtggaggtgccacaagttacctgggaagatattggtggtctagaagatgtaaagagagaa
ctccaggagcttgtacagtatcctgtggagcacccagacaagttcctcaaatttggcatg
accccatcgaaaggggttctgttctatgggccacccggttgtggtaagacactgctggcc
aaagccattgcaaatgaatgccaggcaaacttcatttccatcaaagggccggaattgctc
accatgtggtttggcgagtctgaagccaacgtgcgcgagatctttgacaaggcccgccaa
gcagctccttgtgtgctcttctttgatgagctggactccattgcaaaggctcgaggcggg
aatattggcgatggtggtggtgctgcagaccgcgtcatcaaccagatcctgacagagatg
gacggcatgtccaccaagaagaacgtcttcatcatcggtgccaccaacaggccagacatc
atcgacccagccatcttgcgccccggccgcctggatcaactcatctacatccccctgcct
gacgagaagtcccgggttgctattcttaaggccaacctgaggaaatcaccagttgccaag
gacgttgacctggatttcctagctaagatgaccaatggcttttcgggggctgacctgaca
gaaatttgccagcgtgcctgcaaactggccatccgtgagtccatcgagagtgagatcagg
cgagaacgcgagaggcagaccaacccttctgctatggaagtggaggaggacgacccggtt
cccgaaatacgcagggaccactttgaggaggccatgcgctttgctcgccgctccgtcagt
gacaacgacatcaggaaatacgagatgtttgcacagactctacagcagagccgtggcttc
ggcagcttcaggttcccgtcgggtaaccagggcggcgccggtcccagccaaggcacagga
ggcggcagcgggggcaacgtgtacagcgaagacaatgacgatgatctctacggttaa
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integrated database retrieval system
