Charadrius vociferus (killdeer): 104290676
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Entry
104290676 CDS
T08577
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104290676 (JMJD1C)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104290676 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
FYVE
C1_2
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
104290676
NCBI-ProteinID:
XP_009888102
LinkDB
All DBs
Position
Unknown
AA seq
2356 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAAPKQNSHQ
HQQQRNTRPNKRKGSDSSMPDEEKVKEERYDYIGRGENPKTKNKHFLSKRRKPEEDEKKI
SMKRLRTDNISDYSESSDSEISNKRLTDSSSEQNSENELKSKNTSKINGEEGKSQTIEGV
EQTLTDRQSPWDEIQEDKKHEETERLKSSILEQQEKSSLHAAEQPTPYEQNAKDPHVQEC
NAEKHHTAELKNEQFVPRPPTPKCVVDITNENNSEKESQDNAASTFGLQTVQKIESHSSD
LKQQFANANFLEARKQEADQSWVSSVVKTDLIQPGVVKTLSVNEHLNPEKEKVQYGSFMS
SLNVASLAEESKPHKQSPVPDSVKSKPSASVDHPKTKSPDVKPKFTQSSDTVKSKVSSQN
SHATGLTRSANKTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQET
GTNHISPYLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLLAGSSAQAPLSAINTHPLST
ASHHSVHHPHLLPAVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSPHL
LGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPSPW
LHQPTPVTSADSLGLLSHIPVRPSSADPLRPLKLTTHSSPPLSKSIVEHHKEELERKAFI
EPLRSVTTAPVKTELEQSRTQTAKESHMHRHFGDPMLNQLPRPPQETGERLSKYKEEHRR
ILQESIEVAPFTAKIKALEGERENYSRVTSLSSSPKSHSVKYDKDADRSVSELYKMKHSV
PQSLPQSNYFTTLSNSVVNEPPRSYPSKEASSAYVDKQTNCASTAASPQSLPSYISSLSK
PPPLIKHQPESEGSASKIPEQLSQSVQSHSVNSFRSDSRSPTQLSISSSNTLRSMPALHR
APVFHPPVHQNLEKKESSYSSLSPPTLTPVQPVNAGGGKIQELQKPPTLVPEPKEAQTVY
KGTSEQNLSEIWKSNNAPNNEKVDWHVERMSGKSQSATASVIVRPPSSTKYDSVAVMQSA
SKDRGSERSSAVTNQADCLKTAEARETGRIILPNMNSDSTRTQYEKKFPAVSQGSVPRAV
TPTTTMICSTKTDVTASAATTTSVSSWGSSEVTYSLSNTVLACAPLECTASRAASQAVAQ
AQECKVSTPAPVTPAAGKTGGAAQPSSGFSTSTDFVHLKKHKAALAAAQFKSSNTSESES
NSVKNQTFSTSLSLDSTIVCNTINKANSVGSGQTSQTSQPNYHTKLKKAWLTRHSEEDKN
TNKKENSGNSVSEIIKPCTVNLIASTSNDLQNNIDSKILADKFAKEDKHPRRKAKRTYES
GSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDTEEEVKPNGVLSRSAKEKSKL
KLQSGSNTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEE
PTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKY
ILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCG
FVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIR
EKFEIKSHCQCTSKQSTQAGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQKSET
NGNTSPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEEKDQDN
LESQNCKSSPPASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASGKSGRT
MPNILDDIIASVVENKIPPNRAPKINIKSEIKDEPKDDRKCIQDDCSKPSSDIQYSWICD
KHVLWLRDHKNNNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILN
CKDSIISNTNVKEFWDGFEDVSKRQKIKNGETALLKLKDWPSGEDFKAMMPARYEDLLKS
LPLPEYCSPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVN
ILVYVGIAKGNGVLSKSGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIRE
FLQKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTVIQFLGDAIILPAGA
LHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMV
RALKIHEGEMEDMDEN
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccctactccttaaatggttatagggtgagagtgtacagacaggattctgcc
acccagtggtttactggtatcattactcatcatgatctcttcacccgcactatggttgtt
atgaatgaccaggtgttagaacctcagaatgttgatccttctatggttcagatgaccttt
ctagatgatgttgttcactctttgttgaaaggtgaaaatattggcatcacttcacgccga
cggtctcgctccaaccagaacagcaacacagtccacggtcattatacgcgtgcgcaagca
aacagccccagaccagcaatgaattcccaaactgcggcaccaaaacagaattctcaccag
caccagcaacagaggaatactcggccaaataagaggaaaggctctgatagcagcatgcct
gatgaagagaaggtgaaagaagaaagatacgattatataggtcgaggagaaaaccccaaa
accaagaataaacacttccttagtaaaagaagaaaacccgaagaggatgaaaaaaaaata
agtatgaagagactgcggacagacaatatctcagattactctgagagcagtgactcagaa
atttcaaataaaagattaacagattcgtcctcagagcaaaattcggaaaatgagttgaaa
agcaagaacacttcaaagataaacggagaagaaggaaaatcccaaactattgagggagta
gaacagacactaacagataggcagtctccatgggatgaaatacaggaggataaaaaacat
gaagagacagaaagactgaaatcatccatcttagagcagcaggaaaaatcttcactccat
gcagcagagcagccaacaccttatgagcagaatgccaaggatccacatgttcaagagtgc
aatgcagaaaagcatcatactgcggaattaaaaaatgagcaatttgtacccagacctcct
actccgaaatgcgttgttgacattactaatgaaaacaactctgagaaggagagccaggat
aatgctgcaagtacctttggtttgcaaacggttcagaaaatagaatctcacagcagcgat
ttaaaacagcagtttgcaaatgcaaatttccttgaagcaagaaaacaggaagctgatcaa
agttgggttagcagtgttgttaaaacggatttgatacaacctggagttgtaaaaacatta
tcagtaaacgaacacttaaatcctgaaaaagaaaaagtgcagtatggctcctttatgtct
tcgttaaatgtagcttctctagcagaagagagtaaaccgcataaacaaagtccagtcccc
gattctgtgaagtcaaaacctagtgcttcagttgatcatcctaaaacaaagtcacctgat
gttaagcctaaattcacccaatcttctgatactgtgaagtctaaggttagttcccaaaac
agccatgctactggattaacaaggtcagccaataaaaccgatcatgatttgcctaggtct
agttttcatccagttccagctagagttagtgctctagaagctactaaaagtcctcttatc
attgacaagaatgaacatttcacggtgtacagggaccccactctgattggacaagaaaca
ggaactaatcacatttcaccttatttgcatcagcataattatcctctgcattcctcatcc
caccgaacctgtttaaatccaaacgctcatcatcctgcattaactggttcatcccatctg
ctagctgggtcttcagctcaggcacccttgtccgctattaacacccacccccttagtacc
gcatctcaccattctgttcatcaccctcatctacttcctgcagtgttacccggagtgcct
gctgcctccttgctgggtggccatccacgactagagactgctcatgctagcagcttaagc
catttggcattagcacaccagcagcagcaacagatgttacaacaccagtctccacatctt
cttggacaagctcatccttctgcttcctataatcagctagggctttatccaattatttgg
cagtatccaaacggaacacatgcttactcaggactcggtctgccctcctccaaatgggtc
cacccagaaactcctgttaacgcagaggcttccttgagaaggaatactcccagcccgtgg
ttacaccagcccaccccggtgacctcagctgacagccttgggttactgagtcacattcct
gtgcgaccgtccagtgcagatccccttcggcctctcaaactgacaacacattccagccca
ccgttgtccaaaagcattgtagagcatcacaaagaagaactggagaggaaagcgtttatt
gaacctttacgttctgttacaactgcaccggtaaagacagagctagagcaaagcagaacg
cagacagcaaaggagagccatatgcacagacattttggagatccaatgttgaaccagctg
ccaaggccaccgcaggagactggggagcgactgagcaaatacaaagaagaacacagacgg
atactccaagaaagtattgaagttgctccttttacagctaaaataaaggcactggaggga
gagagagagaactattccagggtaacgtccttatcttcaagtcccaaaagccattcagta
aagtatgacaaagatgccgatcgctctgtgtcagaactatataaaatgaagcattcggtg
ccacagagtttgccacagagtaactatttcaccaccttgtccaacagtgtagtaaatgaa
cctccaagatcatacccatcgaaggaagcttcaagtgcatatgttgataaacagactaat
tgtgcttcaacagcagctagtccccagtctctcccctcttacatttcttctctttcaaaa
cctccacctttaattaagcaccaaccggagagcgaaggctctgcgagcaagatacctgag
cagctttcacagtcagtgcagtctcactctgtaaattcttttagaagtgacagcaggagc
cctactcagttgtcaatctcatcttcaaatacactccggagtatgcctgccttgcataga
gcccctgtgtttcatccccctgtgcaccagaacctggagaagaaggaaagcagctatagc
agcctttcacctccaactctaactcccgttcagcctgttaacgctggtggtggcaaaata
caggagttgcagaaaccaccaactctagtgcctgagcctaaggaagctcagactgtttac
aagggcacttctgaacagaatttatcagagatatggaagtccaataatgccccaaataat
gaaaaagtggattggcatgttgaaagaatgagtggaaagtcacagtccgctacagcatct
gttattgtgcgtcctccttctagcacgaaatacgatagcgtagcagtaatgcagtctgct
tccaaagatcgaggtagtgagagatcttcagctgtgacaaatcaagcggattgcctgaaa
acagcggaagccagggagactggaagaatcattctgccaaatatgaactcagacagcact
cgcacacagtatgaaaagaaatttccagctgtctcgcaaggcagtgttcctcgtgctgtc
acccctaccacaactatgatctgcagtaccaaaacggatgtcactgcatcagcagcaaca
actaccagcgtgtcaagctggggtagttcagaagtgacttactccttatcgaacacagtc
ttggcctgcgcgccgctggagtgtactgcctcgagagccgcaagtcaggcggtggcgcag
gcccaggaatgcaaggtcagcactccagctccggttacacccgccgctggcaagacaggc
ggtgctgctcagcccagctcgggattctccacctctaccgactttgtccatttgaaaaag
cacaaggcggcgttggctgcagctcagtttaaaagtagtaacaccagtgagtctgagtcc
aactctgtgaaaaatcagacattttcaacctctctctccctagacagtactatcgtctgt
aatacaataaacaaagcgaactctgtaggcagtgggcaaacttcccagacgagtcagcca
aactaccacactaaactgaaaaaggcttggctaacaagacattcggaggaagataaaaac
actaataaaaaagagaattcagggaacagtgtctccgaaattattaagccgtgcactgtc
aatttaatagcttctacatcaaatgatttgcaaaataacatagatagtaaaatcttggca
gataagtttgcgaaggaagataagcaccctaggagaaaggcaaaacgaacttacgagtct
ggctctgaaagcggagactctgatgaaagcgagagcaagtcagagcaaaggactaaacgg
cagcccaagccaacttacaaaaagaaacaaaatgatttgcagaaaaaaaagggtgataca
gaggaagaagtaaaaccgaatggtgttctaagcaggagtgccaaagaaaaaagcaagctg
aagttacagagtggcagtaacactggtatacctcgctcagtgttaaaagactggcgcaaa
gtaaagaagctgaagcaaacgggagagtcctttttgcaggatgattcttgctctgaaata
ggaccaaatttgcaaaaatgcagagaatgtaggttaataagaagtaagaaaggcgaagaa
ccaactcactcaccagtattttgtagattttactactttcggcggttatcttttagtaag
aacggagtggttaggatagatggtttctcctctcctgatcaatatgatgatgaagcactg
agtttatggacacatgaaaactatgaagatgatgaactggacctagaaacttctaaatac
attctagatatcataggtgataaattttgtcagttggtaacgtctgagaaaacagccatg
tcctgggtgaaaaaagacgccaaaattgcatggaagagagcagtgagaggagtccgtgag
atgtgtgatgcatgtgaagccacattatttaacattcattgggtctgccaaaaatgtgga
tttgtggtctgcctagattgttacaaggcaaaggaaagaaaaagttctagagataaggag
ttatatgcctggatgaagtgtgtgaagggacagccccatgatcacaaacacctgatgcca
acacagattattccaggctctgttctgacagaccttctagatgctatgcacaatataaga
gaaaaatttgaaattaaatcccattgtcagtgtaccagcaagcagagcacgcaagctggc
aagctccctgcaatgaacggtgtgtctcaggttttgcagaatgtccttaaccacagtaat
aaaatttctctgtgcatgcctgagtctcaacagcagaatactcctcaaaagtccgagaca
aatggcaatacaagtccaaggagtgatgtaagcacagacagcaagttaacaccacctgaa
tcccagtcaccgctgcattggttagctgatcttgcagagcagaaagccagagaagaaaag
aaagagaacaaagaatgtccttctggaaaacattcaaaggaagagaaagaccaggataat
ttggagtcccaaaactgtaaaagctcccctcctgcatcccagaacaatgagcagggttca
accttacgagatttattaactacaacagcgggcaaactgcgtctaggttctacagatgct
ggtattgcttttgctccagtttactctacaggaacagcaagtggcaagagcggaaggact
atgccgaacattcttgatgacataattgcttcagtagtagaaaacaagattccaccaaat
agagcaccaaagataaatataaaatctgaaataaaagatgagccaaaggatgatagaaaa
tgtattcaggatgactgcagtaaaccgtccagtgatattcagtattcgtggatctgtgat
aagcatgttttgtggctcagagaccataaaaacaacaataactggaagctcttcaaggag
tgctggaaacaaggaaggcctgttttagtgtctggtatgcataagaaaatgaacttcagc
ctgtggaaagctgagtcaattagtctagattttggaaaccagcaagctgatatcttgaat
tgcaaagacagtattatttcaaacaccaatgtgaaggagttctgggatggttttgaagat
gtttcaaaacggcagaagataaaaaatggggaaacagctctactaaaactgaaagattgg
ccttcaggtgaagatttcaaggctatgatgccagcaagatatgaggacttactaaaaagt
ttacccttgcctgaatattgtagtccagaaggaaaactaaacttggcttctcatctgcca
ggattttttgtccgtccagatttgggacccagactatgcagtgcatatggtgtggctgct
actaaagaccatgatataggaaccacaaatctccatattgaagtttctgatgtcgtgaac
atccttgtttacgttggcatagcgaaaggaaatggagtactttccaaatcaggagttttg
aagaagtttgaagaggaagatttggatgaccttttaaggaagcggttgaaagactcgagt
gaattacctggtgctttatggcacatttatgctggcaaagatgctgacaagataagagag
tttctgcaaaagatcgcaaaagaacaaggcttagaagttttaccggagcatgatccaata
cgtgatcaaagttggtacgtgaacaaaaaacttcgccaaagacttcttgaagaatacgga
gtaaaaacctgtacggttattcagtttcttggtgatgctattattctaccagcaggagca
cttcatcaggtgcaaaattttcacagctgcgttcaagtaactgaagactttgtgtctcca
gaacatcttgtacagtcatttcacttaacgcaggagctgaggctgtcaaaggaagaaatc
aattacgatgataaactgcaggttaaaaatatcttgtatcatgcagttaaagaaatggtg
agagctttgaagattcatgaaggtgaaatggaagatatggatgaaaactaa
DBGET
integrated database retrieval system
