Charadrius vociferus (killdeer): 104290721
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Entry
104290721 CDS
T08577
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104290721 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104290721 (XPC)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104290721 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
104290721
NCBI-ProteinID:
XP_009888167
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MDEDNTDDDDDESEDEWEDVEELQEPATDKLEEAAVLPAVALPSNPVEIEIETPEQVKKR
ERREKRQAEFEIYLRRMMKRFSKEVRENTHKVHLLCLLANGFYRNRICSQPDLHAIGLSI
IPTRFTKVPAGQVDLLYLSNLVKWFVGTFTVNDELSTEKGEPLQSTLERRFAVYAARDDE
ELVHVFLIILRALQLLCRLVLSFQPIPLRETRAKVKSSSKRQSLSGTSEGQETSATTPKA
VAKKCPCRKAKQDEKSSESEEDNKEPKKRKTAQTKRTRKSKLTAGSQEQKESSNAENSLA
EKDVPVRPKNDRRRRVASKVCYKEESGSDEGSVSDYEVSEEESDLSDEDFETVSKRQRSS
LGSQKSRVTAIKSPKTETSESRLSKNSHGAEPRPAKSTDPALPHAQRKRNKIISSDEDDG
QQEVRKVVGTDQWLEVFLEREDKWVCVDCVHGNVGQPQLCFTYATKPLSYIVGFDSDGSV
RDVTQRYDPVWMTTTRKSRVDPEWWEDTLQPYKSPYVERDKKEENEFQVKLQDQPLPTAI
GEYKNHPLYALKRHLLKYQAIYPESAAVLGYCRGEAVYSRDCVHTLHSKDTWLKQARVVR
IGEVPYKMVRGFSNQARKARLAEPANRDKEDLALFGRWQTEEYQPPIAVDGKVPRNEYGN
VYLFLPSMLPIGCVQLRLPNLNRLARKLDIDCAQAITGFDFHGGYSHPVTDGYVVCEEYK
EVLIAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSVKTEPSAPETQK
GAGFSSDEEGGPSSETVVGNVAISWPQNRQLEKKKEEMTTRKSKREKKGEAAQLFPFEKL
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagacaatactgacgatgatgatgatgaaagtgaagatgaatgggaggatgtg
gaagaactccaagaacctgccacagacaagttagaagaagctgctgttcttccagcagtg
gcgctcccaagcaatcctgtcgagatagagattgaaaccccagagcaggtgaagaaaaga
gagaggagagaaaaaaggcaagccgagtttgagatctatcttcggagaatgatgaaacgt
ttcagcaaggaggttcgtgagaacacacataaggttcacctgttgtgtttattagcaaat
ggtttctataggaacaggatctgcagccagccagatcttcatgccattggtctatccatc
atccccacccgcttcacaaaagtgcctgcaggccaagtggaccttctctacctttccaac
ttggtaaaatggtttgttggaaccttcactgtcaatgatgagctttccactgagaaagga
gagccccttcagtcaaccttggagaggcgctttgccgtctatgctgcacgagatgatgaa
gagttggttcatgtatttttaattattttgcgagcattgcagctgctgtgtcgcctcgtg
ctgtcttttcagcctattcctctcagggagacaagagcaaaggtaaaaagctcatccaag
aggcagtctctcagtggtacctctgaggggcaggagacctctgccacaacacccaaagct
gtggcaaaaaaatgcccctgcagaaaagctaaacaggatgaaaaatcctcggagagcgaa
gaagacaacaaggagccaaagaaacgcaaaactgctcagaccaaaaggacacgcaagtca
aagttgactgcaggtagccaggaacagaaggaatctagtaatgcagagaacagtttagcg
gaaaaagatgtgccagtcaggcccaagaatgatcgccggagacgggtggcctccaaagtg
tgttacaaagaagagagtggaagtgatgagggcagtgtttcggactatgaggtttcagag
gaggagagtgatctctctgatgaggattttgaaactgtttctaaaaggcagaggagctca
ctgggctcccagaaatcaagggtaacagctataaaaagcccaaaaactgagacttcagaa
tcacggctatccaaaaattcacatggagctgagcctaggccagcaaaaagtacagatcca
gccttgcctcacgcacagagaaagcgaaacaaaattatatctagtgatgaggatgatgga
cagcaggaggtaaggaaagtggtgggcacagaccagtggctggaggttttccttgaacgt
gaggacaagtgggtgtgtgtagactgtgttcatggcaacgttggccagccccagctgtgc
ttcacatatgccacaaagccgctttcctacattgtgggatttgacagtgatgggagtgtc
agggatgtgacgcagagatatgacccagtgtggatgaccacaacaaggaagagtcgtgtg
gaccctgagtggtgggaagacacgctgcagccatataaaagtccatatgtggaaagagac
aagaaggaggaaaatgagtttcaagttaagcttcaagatcagcctctaccaacagcaatt
ggagagtacaaaaaccaccctctttatgcactgaagaggcacctcttgaaatatcaggcg
atatatcctgagtcagctgctgtcctagggtactgcaggggagaggctgtctactccaga
gactgcgtacacacgctgcactccaaggacacttggctaaagcaagctcgagtggtgagg
attggagaagtgccttacaagatggtgagaggattttccaaccaggcgaggaaggcgcgc
cttgcagagcctgcaaaccgggacaaggaggacctggcgctgtttggtcgctggcagaca
gaggagtatcagccacctatagcagtggatggaaaggttcctcggaatgagtatggaaat
gtctatctcttcctgccatccatgttacccattggctgtgtgcagctgagactcccaaac
ctgaacagattggcgcggaagttggacattgactgtgctcaagccatcactggatttgat
tttcacggcggttactcgcacccagttactgatggctacgttgtctgtgaggagtataaa
gaggtcctcattgctgcctgggagaatgaacaagcagaaatagaaaagaaggagaaggag
aagcgtgagaaaagagctctggggaattggaagctgctgacaaaaggacttcttatcaga
gagagactgaagcaacgctactccgtcaagactgagccgtcagcacctgagacacagaaa
ggagcgggattctcttctgatgaagaaggaggtccaagttcagagactgtggtagggaat
gtggccatttcttggccccaaaatcgccagttagagaagaagaaagaagagatgacaacc
agaaagagcaagcgagaaaagaaaggagaagcagcacagttgttcccttttgagaaactg
tga
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