Charadrius vociferus (killdeer): 104290793
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Entry
104290793 CDS
T08577
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104290793 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104290793 (TRIP12)
Enzymes [BR:
cvf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104290793 (TRIP12)
Ubiquitin system [BR:
cvf04121
]
Ubiquitin ligases (E3)
HECT type E3
104290793 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
104290793
NCBI-ProteinID:
XP_009888256
LinkDB
All DBs
Position
Unknown
AA seq
2039 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPENRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQEEDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSLETNKPHTKTKRRHLDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTESLSCIKSGSAVESTGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEPSKTSGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEQINEDTGTA
RAIQRKPNPLANTNTSGHSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPA
VRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKL
PDIFSVYFRREGVMHQVKNLAESEALLTSPPKVCTNGSGTLGTATTISTGTAIAASNAAA
DLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTT
TQSPKSSFLASLNPKTWGRLSTQSNSNNTEPARAAGVSGLARAASKDTISNNREKIKGWI
KEQAHKFVERYFSSENMDGSNPALNVLQRLCTATEQLNLQVDGGTECLVEIRSIVSESDV
SSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGRLEPLENA
PLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGSSFSLNRGSQALKFFNTHQLKCQLQRH
PDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQ
FLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEERESTDDESNPLGRAGIWTKT
HTIWYKPVREDEDGSKDCVGGKRGRAQTAPTKTSPRNSKKHDELWHDGVCPSVLNPLEVY
LISTPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAICKEIIPTSEFINSKLTAKAN
RQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEIN
QSDSQDSRVAPRLDRKKRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLE
FYALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYIHNLQGLFALPFGRTAKPAHIAKV
KMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFSIDPVVAKSIYHLE
DIVRQKKRLEQDKTQTKESLQYALEALTMNGCSVEDLGLDFTLPGFPNIELKKGGKDTPV
TIHNLEEYLRLVIFWALNEGVARQFDSFRDGFESVFPLSHLQYFYPEELEQLLCGSKTDT
WDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPVGGFRSLN
PPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacacttagggcaggcaaaa
cataaggcacatagccctcctgagaatagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaagaagaagatccggagagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccttggagactaataagccacatactaaaactaagagaagacacttagaccaagaa
cagccgaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagagtctgtcttgtataaagagt
ggttcagcagttgaatcaactggcgctgaagagaagtcagcaaaactctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttctacatcatcctcctcttctgctgttgcctctgcttcttctactgttcctcagggt
gccagagtgaaacagggaaaggaccagaataaggctagacgttcccgttctgcatccagc
cccagtccaagaaggagtagcagggacaaagaaccaagtaaaacaagtggctcttcaaag
tttgactgggctgctcgattcagcccaaaagttagtctgcctaaaacaaaactgtctcta
ccaggctcttccaagtcagagacatcaaaacctggaccttcaggactacaggctaagcta
gcaagtctaagaaaatctacaaagaagcgtagtgagtcaccacctgctgagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaggatggtgttaactcttcagctgcacgtacagatgaggctccccaggga
gctgcagcttctagttctgttgctggggctgtaggtatgacaacctctggagaaagtgag
tcagatgattctgagatgggaagactacaagctctattagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttctaaagcccaacagcttttacaaggtctccaagccactgatgaaagtcag
caactacaggcagtgattgagatgtgccagctgttggtcatgggaaatgaagaaacactg
ggaggatttccagtcaagagtgttgtaccagctttgataacgctgctgcagatggagcac
aactttgacattatgaaccatgcgtgtcgggccttaacatatatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttatt
caatgcatagatgtggcagagcaggcgcttacagccctggagatgttatcacgcaggcat
agtaaagccattctgcaggcaggtgggttggcagactgtttgctgtatctggaattcttc
agtataaatgcacagagaaatgcactagctattgctgccaactgctgccagagtataaca
cctgatgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacacat
caggacaaaaagtctgttgaaagcacttgtctctgttttgcacggctagtggacaacttc
cagcatgaggagaacttgctccagcaggttgcttctaaggacttgttaacaaatatccag
caactcttggtagtgacgcctcctatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaattgtcctacacttgcagtccaacttatgaagcaaaat
attgcagaaacgcttcacttcctcctttgtggagcctcaaatgggagctgtcaagaacaa
attgaccttgttccacgaagtcctcaagaactttatgagcttacttctcttatctgtgaa
ctgatgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaagga
aatgcgcaaaatacagatggtgcgatatggcaatggcgagatgacaggggcctctggcat
ccctataacaggattgatagtcgaataatagagcaaataaatgaggatactggaacagca
cgtgccattcagcgaaaaccaaaccctttagccaatacaaacactagtggacattcagaa
ctgaagaaggatgatgctcgagcgcaactaatgaaagaggacccagaactagcaaaatcc
tttatcaaaacattgtttggtgttctttatgaagtatatagttcttcagctggacctgct
gttagacacaagtgccttagagcaattcttaggataatttattttgctgatgctgaactt
ctgaaggatgtgctgaaaaaccatgctgtttcaagtcatattgcctccatgctgtcgagt
caagaccttaagatagtagttggagccctgcagatggcagagattttaatgcaaaagcta
cctgacatttttagtgtttacttcagaagagaaggggtgatgcatcaagtgaaaaactta
gcagagtctgaggctttgctaacaagcccaccgaaagtatgcactaatggatcaggaacg
ctgggtaccgcaacaacaataagtactggaacagccatcgctgccagtaatgcagctgct
gatttgggctctcccagcttacaacacagccgggaggattctttggatttgagcccacag
ggacgactgagcgatgttctgaagagaaaaagactgccaaaacgagggccaaggagacca
aaatactctcccccaagagatgatgacaaagtagacaatcaagctaaaagccctacaact
actcaatctcctaaatcttccttcttggcaagtttaaatcccaaaacgtggggaagatta
agcacacagtccaacagtaataatactgaaccagcaagagcagcaggagtaagtggtctt
gcaagggctgcttccaaggataccatttccaataacagagaaaaaattaagggctggatt
aaggagcaagcccataaatttgtagaacgttattttagttctgaaaacatggatggaagc
aatcctgcactaaatgtattacagagactttgcactgcaactgaacaactcaacctccag
gtggacggtggaacagagtgccttgtagaaatccgtagcattgtctcggagtctgacgtc
tcctcatttgaaatccagcatagtgggtttgttaagcaactgctgctttatttgacatct
aaaagtgagaaagatgctgtaagcagggatatcagattgaaaagatttcttcatgtattt
ttttcttctccacttcctggagaagaaccccttggaagattagagccattagaaaatgca
cctttgttggcattagtccataaaatgaacaattgcctcagtcagatggaacagtttcct
gttaaagtgcatgacttcccaagtggaaatggaacagggagcagtttttctcttaacaga
ggatcccaagctttaaaattcttcaatacacatcaattaaaatgccaactgcaaagacat
ccagactgcgctaatgtgaaacagtggaaaggtggacctgtgaagattgatcctctggct
ttggtacaagccattgaaagatatcttgtagttagaggctatggaagagttagagaagat
gatgaggatagtgatgatgatgggtcagatgaagaaatagatgaatctttggctgctcaa
ttcttaaattcagggaatgtgagacatagactgcagttttacattggagatcacttactg
ccatacaatatgactgtgtatcaagcagttaggcagtacagtttgcaagctgaggaggag
agggagtctacagatgatgaaagcaacccattaggaagagctgggatttggacaaaaacg
cataccatttggtacaaacctgtgcgagaggatgaagatggtagtaaggactgtgttggt
ggtaaaagaggaagagcacaaactgctcccacgaaaacctcccctagaaattctaaaaaa
catgatgaattgtggcatgacggtgtatgcccttcggtattaaatcctctagaagtttac
ctcatatctactccacctgaaaacataacatttgaagatccctcattagacgttattctt
cttttgagagttttacatgctatcagtcgatactggtattacttgtatgataatgcaatc
tgcaaggagattattccaacctcagagtttatcaacagtaaactgacagcaaaagcaaac
aggcagcttcaggatcctttggtaattatgacaggaaacataccaacttggctgacagaa
cttggaaaaacatgcccatttttctttccatttgatacccgtcaaatgctgttttatgta
actgcttttgatcgtgatcgagccatgcaaagactgctggatactaatccagaaatcaat
caatcagattctcaggatagcagagtggcaccgcgactggacaggaaaaaacgcactgtg
aacagagatgagctgttgaaacaggcagaatctgtgatgcaggatctaggcagttcaaga
gccatgttggaaatccagtatgagaatgaagttggcacaggcctaggccccacactagag
ttctatgcacttgtatctcaggaactacagagagcagacttgggcctttggaggggagaa
gaagtgactttagccaatccaaaaggaagccaggaaggtaccaaatacatccataacctt
caaggcctttttgcacttccttttggtagaacagccaagccagctcacattgcaaaagtt
aaaatgaagttccgctttctgggaaaactaatggccaaggcaatcatggattttagactg
gtggaccttcctcttggacttcctttttataaatggatgctacgacaggaaacttccttg
acatcacatgacttgttcagtattgatccagtagtagccaaatcaatatatcaccttgaa
gatattgtaagacaaaagaaaagacttgaacaggacaaaacacagaccaaagaaagtcta
cagtatgcattggaggctctgactatgaatggctgctcagtggaagatttaggactggac
ttcacacttcctgggtttcctaatatagaactgaaaaaaggggggaaagatacaccagtc
accatccacaatttagaggagtatctcagattggttatattctgggcactaaatgaaggt
gttgccagacagtttgactcattcagagatggatttgaatcagtcttccccctcagtcat
cttcagtacttctatcctgaggagttggagcagctcttgtgtggcagcaaaacggacact
tgggatgcaaagactttaatggaatgttgcaggccagatcacggttatacacatgacagt
cgagcagtgaagtatctctttgaaattctcagtagctttgatagtgagcagcagagactg
tttcttcagtttgtgacgggtagccccagactacctgtaggaggctttcgaagtttgaat
cctccattgacaattgtacgcaagacatttgagtccacagagaatccggatgatttcttg
ccctcagtaatgacttgtgtgaactatctcaaattgccggactattcaactattgagata
atgcgtgaaaaactcttgatagctgcaagagaagggcagcagtcattccatctttcctga
DBGET
integrated database retrieval system
