Charadrius vociferus (killdeer): 104290905
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Entry
104290905 CDS
T08577
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvf04040
]
104290905 (TRPC1)
Ion channels [BR:
cvf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104290905 (TRPC1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
104290905
NCBI-ProteinID:
XP_009888386
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MVKKLLEENSSGEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSE
VVGAVDILLNHRPKRSSRPTIKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPKPHAVGCECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWP
VLSLCYLLAPKSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALER
IDYLLIIWLIGMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHD
YAERKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLG
MFLLVLFSFTIGLTQLYDKGFTINEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLA
HVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKF
ARAKLWLSYFDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRN
LKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFR
TSKYAMFYPRN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaaactcttagaggaaaacagctcgggtgaaatgaacataaattgtgtggat
gtgcttggacgaaatgctgttaccataaccattgaaaatgaaaacctggacatattacag
cttcttttggattatggctgccagtcatcggatgcacttttggtggctattgactctgaa
gtggtgggagctgttgacattctgcttaatcaccgaccaaaaagatcctccagaccaacc
attaaactaatggaacgcattcagaacccggagtactcgacgaccatggatgtggcacct
gtcattttagctgctcatcgtaacaactatgaaattctcaccatgttgttaaagcaagac
atatcattacccaaacctcatgctgtaggctgtgaatgcacgctctgtactgcaaagaac
aaaaaagatagtctacgacattccaggtttcgtcttgacatttatcggtgtttggccagt
cctgctttaatcatgttgacagaggaggatccgatcctgcgagcttttgaacttagtgca
gacttgaaagaattaagccttgttgaggttgaattcagaaatgattatgaggagctagct
caacagtgtaaaacctttgctaaagatttgcttgcacaagcacggaattcacgggagctg
gaagttattctgaatcacacatctagtgatgaacatgtagacaagagaggattgttggaa
gagaggatgaacttaagtcgcttaaaacttgcgatcaagtataatcaaaaagagtttgtt
gctcagtctaactgccagcagtttctaaacactgtgtggtttggacagatggcaggctat
cgacgcaagcacacatgcaagaaaattttgactgttttgatggttggcattttctggcca
gttctgtccctgtgttacttgttagcccctaaatctcgagtaggtcgaataattcacact
ccttttatgaagtttattattcatggagcttcatatttcacatttctgttactacttaat
ttgtactcccttgtctacaatgagaataagaagaacacaatgggaccagcccttgagaga
atagactatcttctgataatatggctgattggaatggtgtggtcagatgttaaaagactc
tggtatgatggtctagaagactttctagaagaatcccgtaatcagcttagttttgtcatg
aattctttgtacttggcaacttttgctctcaaagtcgttgcccataacaagtttcacgat
tatgctgagaggaaggactgggatgcattccatcctaccctagtggcagaaggccttttt
gcttttgctaatgttcttagttacctgcgtctcttcttcatgtacacaaccagctctatt
ctgggaccactccagatttcaatggggcagatgctacaagattttggaaagtttctgggc
atgtttcttcttgtcttgttctcattcacaattggattgacacaactttatgataaagga
tttactataaatgaagaaaaggactgtgcggggattttctgtgaacaacagagcaatgac
acattccattcgtttattgggacatgttttgctctgttctggtatatattctccctggca
cacgtagccatctttgtcacacgttttagctatggtgaagaattacagtcttttgtgggt
gctgttattgttggtacctacaatgtggtggttgtgatagtattaactaaactccttgtg
gcaatgcttcataaaagttttcagctgatagcaaatcatgaagataaggaatggaagttt
gctcgtgccaagctttggcttagctactttgatgacaaatgcacgctacctccacctttc
aatgttattccctctcccaagactatctgttatcttttcaacagtctcagtaaatggatc
tgctctcatacatcaagtggcaaagtgaaacgtcagaacagcctaaaggaatggagaaac
ctgaagcaaaagagagatgagaattatcaaaaggtgatgtgttgcttagtccaccgttac
ttgacttccatgagacagaagatgcagagcacggatcaggcaactgtggaaaacttaaat
gaactgcggcaagacttgtcaaaattccggaatgaaatgagagacctgcttggctttcga
acttctaaatatgctatgttttatccaagaaactaa
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