KEGG   Charadrius vociferus (killdeer): 104290955
Entry
104290955         CDS       T08577                                 
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
cvf  Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvf04131]
    104290955 (COPB2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvf04147]
    104290955 (COPB2)
Membrane trafficking [BR:cvf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    104290955 (COPB2)
Exosome [BR:cvf04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   104290955 (COPB2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st EIF3I Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR41 NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP PEP5_VPS11_N Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Aladin WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 TPR_ZFYVE26
Other DBs
NCBI-GeneID: 104290955
NCBI-ProteinID: XP_009888444
LinkDB
Position
Unknown
AA seq 970 aa
MAIPDTLRSAIVYSLGAVGKSGSKDKHGIACNCLAYFSSIYGRRNKRQVHSLLSDIMSPL
RLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAA
KFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLI
KLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG
HEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPI
IITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREE
PAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPN
GRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKEKKS
FKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIATEE
SFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVNRL
NYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDF
SMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQLAVE
AESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAEKDG
KNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQK
AAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAREYPLVTPNEERNLLEEAKGFE
PSGIMAPQKKAEEPVPSPKPEVKMTVLQNSDLLPTRDQKTLLDLEDDLDNLDLEDIDTTD
INLDEEILDE
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggccatcccagacaccctgaggtcagccatagtctactccttaggagcagtaggtaag
agtggttccaaggataagcacgggattgcgtgcaattgtcttgcctacttttctagtatt
tatggcaggagaaataaacgacaagttcattctctgctgtcagatatcatgtctcctctc
cgacttgatataaagcggaaactaacagctcggtctgaccgggtgaagagcgtagacttg
catccgacggaaccatggatgttggctagcctttacaatggcagcgtctgtgtttggaac
catgaaactcagactctggtgaagacttttgaagtgtgtgacctaccagtgagagctgcc
aaattcgtggcaagaaagaattgggtggttacaggagctgatgacatgcagattagagtt
tttaattataacaccttggaaagagttcacatgtttgaagcccattcagattacattcgt
tgtattgctgtgcatcccacacagcctttcatactgacaagcagcgatgacatgcttatt
aaactctgggactgggataaaaaatggtcttgttctcaggtgtttgaaggacacacccat
tatgtcatgcaaattgtcataaacccaaaagacaataatcagtttgccagtgcctctttg
gataggacaatcaaggtgtggcagcttggctcttcatcacccaacttcactttggaaggc
catgagaaaggagtaaactgcattgactattacagtgggggagacaagccgtacctcatt
tcaggtgcagatgaccggttggttaagatctgggactaccagaataaaacctgtgtacaa
acactggaaggacatgctcaaaatgtgtcatgtgtcagcttccatcctgaattgcctatt
attatcacaggctcagaagatggaactgtgcgcatttggcattcaagcacttaccgcctg
gaaagtacactcaactatggtatggagagagtgtggtgtgtggccagtttaagaggatcc
aataatgtggctttgggatatgatgaaggcagcattattgttaagcttggtcgtgaagaa
cctgccatgtccatggatgcaaatggaaaaattatttgggctaaacattcagaagtccaa
caggctaacttgaaagctatgggagatgctgaaatcaaagatggagaaagattgccgctg
gctgtaaaggatatggggagctgtgaaatctatcctcagacaattcagcacaaccctaat
ggacggtttgtagtagtgtgtggcgatggtgaatacatcatctacacagctatggctctg
agaaacaagagctttggttctgcacaggagttcgtatgggcacacgattcttcagaatat
gcaatcagggagagcaacagtgttgtaaagatatttaaaaacttcaaagagaagaagtca
ttcaaacctgattttggagcagaaggcatctacggtggcttcctgttgggggtcagatct
gttaatgggttggcattctatgattgggaaaacacagaattgattcgcagaattgaaatt
cagcccaagcacattttctggtctgactcgggggagcttgtctgcattgctacagaagag
tcattcttcattctgaaatacctatcagaaaaagttgcggcagcccaagaaacacatgaa
ggtgtcactgaagatggaattgaagatgcttttgaggttcttggtgagattcaggagatt
gtgaaaacaggcttgtgggtaggagactgctttatttacaccagttctgtgaacagactc
aactactatgttggaggagaaattgtcactattgcccatttagacaggacgatgtatctt
ttggggtatatccctaaggacaaccgactttatttgggtgataaggagctaaacattgtt
agctactctttgctggtctctgtgcttgaatatcaaactgctgtgatgagaagagatttc
agtatggctgacaaagttcttcccacaattccaaaggaacagagaaccagagttgcacat
ttccttgaaaaacagggcttcaaacaacaagctcttgcagtatctacagatccagagcat
cgttttgaacttgctcttcaacttggagaattaaaaatagcgtatcagcttgcagtggaa
gcggagtcagaacagaaatggaagcagcttgctgagcttgccattagtaaatgccagttt
ggcttagcccaggagtgtctccaccatgcacaagactacggaggactgctgctcctggct
acagcttcaggcaatgctaacatggtgaataagttagctgaaggagccgaaaaagatggc
aagaacaatgttgcatttatgagctacttcctgcagggaaagcttgattcatgtttggaa
ctcctgattaaaaccgggcgtctcccagaagctgcttttcttgcacggacgtatttgcca
agccaagtgtcaagggttgttaaactgtggcgggagaatctatctaaagtcaaccaaaaa
gctgctgagtcccttgctgatcctacagaatatgaaaatcttttccctggattaaaggaa
gcttttgttgctgaagaatatgttaaacaaagtcttgctgacttgcggccagccagggaa
tatccccttgtcactccaaatgaagagagaaacttgcttgaagaagcaaaaggctttgag
ccttctggaataatggcacctcagaagaaggctgaagaaccagttccatctcctaaacca
gaagtgaagatgacagttttgcagaattctgatctacttccaacaagagatcaaaagaca
ctgctggacttggaagatgacttggataacttggatctggaggatatcgacaccacagat
atcaatttggatgaagagatcttagatgagtga

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