Charadrius vociferus (killdeer): 104290972
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Entry
104290972 CDS
T08577
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104290972 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104290972 (HSPD1)
03110 Chaperones and folding catalysts [BR:
cvf03110
]
104290972 (HSPD1)
03029 Mitochondrial biogenesis [BR:
cvf03029
]
104290972 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvf04147
]
104290972 (HSPD1)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104290972 (HSPD1)
Messenger RNA biogenesis [BR:
cvf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104290972 (HSPD1)
Chaperones and folding catalysts [BR:
cvf03110
]
Heat shock proteins
HSP60 / Chaperonin
104290972 (HSPD1)
Mitochondrial biogenesis [BR:
cvf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104290972 (HSPD1)
Exosome [BR:
cvf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104290972 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
104290972 (HSPD1)
Exosomal proteins of breast cancer cells
104290972 (HSPD1)
Exosomal proteins of colorectal cancer cells
104290972 (HSPD1)
Exosomal proteins of bladder cancer cells
104290972 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104290972
NCBI-ProteinID:
XP_009888462
UniProt:
A0A0A0AV25
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MLRLSTVLRQIRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGARLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDAIIAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANSHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLSLNVEDIQPHDFGKVGEVIVTKDDTMLLKG
KGEKAQIEKRIQEIIEQLEVTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALAPANEDQKIGIEIIKRTLKIPAMTIA
KNAGVEGSLIVEKILQSPSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKEPAMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtttatctacagtactccgtcagataaggccagtgtccagagcactcgccccc
catctaacacgagcctatgcaaaagatgtgaagtttggagcagatgctagagctcttatg
cttcaaggagtagatcttctagccgatgctgtagctgtcaccatggggccaaagggaaga
acagttattattgaacaaagctggggcagtcccaaagtgacaaaagacggtgtgacagta
gcaaaggcaattgacttaaaagacaaatacaaaaatattggagccaggttagttcaagat
gttgccaacaatacaaatgaagaagcaggagatggtaccacaactgcaacggtactggca
cgtgctattgccaaggaaggctttgagaagatcagcaaaggcgctaatccagtagaaatc
aggaggggggtgatgcttgcagttgatgctatcatagctgaactgaagaagctgtctaaa
cctgttacaactccagaagaaattgcacaggttgccacgatatcagcaaatggagatcag
gaaattggcaatataatctctgatgcaatgaaaaaagttggccgaaagggtgtaatcact
gtcaaggatggaaaaactctaaacgatgaattggaaatcattgagggtatgaaatttgac
agagggtacatctctccatattttattaatacaaccaaagggcagaaatgtgaattccag
gatgcttatgttttaatcagtgaaaagaaaatttctagtgtacagtccatagtcccagct
cttgaaattgccaatagtcaccgcaaacctttggtcattattgctgaagatgttgatgga
gaagctctcagcactctagtcttgaacaggctgaaagttggtcttcaggttgttgctgta
aaagcaccaggttttggtgacaacaggaaaaaccagcttaaggatatggcgattgctact
ggtggtgctgtgttcggagaagagggtttgagcctaaatgtggaagatattcagcctcat
gattttggtaaagttggagaggtcattgtgacaaaagatgacaccatgcttctaaagggg
aagggtgaaaaggctcagattgaaaaacgtattcaagaaattattgaacagctagaagtt
accacgagtgactatgaaaaagagaagctgaatgagcgattggccaaactctctgatgga
gtagcagtattgaaggttggtggcacaagtgatgttgaagtgaatgagaagaaggacaga
gttactgacgccctgaacgcaacccgtgctgctgtagaggaaggcatcgtcccaggtggc
ggctgtgcgttgcttcgctgcattccagcattagatgccttagctccagccaatgaagat
cagaaaattggcattgaaataataaagagaacactgaaaatcccagcaatgactattgca
aagaatgcaggcgttgaaggatcattaatagttgaaaaaatcctgcagagtccatcagaa
gttggctatgatgcaatgcttggggactttgtaaatatggtagaaaaaggaatcatagac
ccaacgaaggttgtgaggactgctctgatggacgctgcaggtgttgcctctctcttatca
acagcagaagcagtggtgactgaaattcccaaagaagaaaaggagccagcaatgggaggg
atgggcgggatgggcggaggcatgggaggcggcatgttctaa
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