KEGG   Charadrius vociferus (killdeer): 104290975
Entry
104290975         CDS       T08577                                 
Symbol
TRIM42
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
cvf  Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cvf01009]
    104290975 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvf04121]
    104290975 (TRIM42)
Protein phosphatases and associated proteins [BR:cvf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104290975 (TRIM42)
Ubiquitin system [BR:cvf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    104290975 (TRIM42)
SSDB
Other DBs
NCBI-GeneID: 104290975
NCBI-ProteinID: XP_009888467
LinkDB
Position
Unknown
AA seq 413 aa
MEDPTLEQVCAPGEGCDHVESLCQSRLLAGPVDPWIEEPMPEQIWPRCSNCCYLTCPSRK
EKCCLCWCFLFTSEQNCSCFPCLYKDNRLCPSCNCSCAEHTDCWWCCCSCSNDPDCKCCC
CGGENSACQYYESKCCRSSANEPHHSRTPGTVQVKTYVVTRKNIQRTLKQGGKQECVCSK
AAAAVFLQSAECLGKVTKNAVPSIFQPSPRLRNNTLRKLKXFDEIFSILQGLVPLLIRIR
QSESKAEKYPYSFSXEIIVPRHVSSTHESKQATLFQSTSLNSLFDLGDLSKDTVRRPSST
PPCYPTQGNEVCTYWDTACETPRKERKYQINFSSPEPIDNESVPVPGSVVIYQYQTAVYP
RTVKIYWAFPTEDMGFFEVEFYEVAHIGPDKVVQSQLAGQLSQLSSPFVPCHI
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggaggaccccacgctggagcaggtgtgtgcacctggagaaggctgtgaccatgtggag
agcctgtgccagagcagactcctggcaggacctgtggacccatggatagaggagcccatg
ccggagcagatctggccacgctgctcaaactgctgttacctgacttgccccagcagaaag
gaaaaatgctgcttgtgttggtgctttttgtttaccagtgagcaaaactgcagctgtttc
ccatgtctgtacaaagacaaccgactttgcccatcctgcaactgctcatgtgcagagcac
accgactgctggtggtgctgctgctcttgttcaaatgacccagactgcaaatgctgctgc
tgcggtggagagaattcagcatgtcagtattatgaaagcaagtgttgcagaagctctgcc
aatgaaccacatcactcaagaacaccaggaactgttcaggtaaaaacctatgtagtgaca
agaaagaacatacagagaactttaaaacaaggaggaaaacaggaatgtgtttgtagcaag
gcagctgcagctgtgtttctgcagtctgcagagtgcttagggaaagtaacaaaaaatgca
gttccttccattttccaacctagtccacgtctaagaaacaataccctaagaaaacttaaa
nnttttgatgaaattttctccattttacagggacttgtcccattgcttatcagaataagg
cagtcagaaagtaaagcagaaaaatatccctattcttttagctgagagataattgttcca
aggcatgtttcaagtactcatgaatccaagcaagcaacattgttccaaagcacatcttta
aattccttgtttgatttaggtgatctgtctaaagacactgtcagaagaccaagctctaca
cctccctgttatcctacacagggtaatgaagtgtgtacatactgggatacagcttgtgaa
actccaagaaaagaaagaaaatatcagattaacttttcaagtccagaacctatagacaat
gaatcagtgccagtgccaggatccgttgttatataccaataccagactgctgtttaccca
aggactgtcaaaatttactgggcttttcccacagaagacatggggttttttgaggtagag
ttttatgaagttgctcatattggtcctgataaagttgtccagtcacaactagctggccag
ctaagccagctttccagcccttttgtcccttgtcacatttag

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