Charadrius vociferus (killdeer): 104291019 Help Entry 104291019         CDS       T08577                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism cvf  Charadrius vociferus (killdeer) Pathway cvf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cvf00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     104291019 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cvf00536]     104291019 (COL3A1) Glycosaminoglycan binding proteins [BR:cvf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104291019 (COL3A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  104291019 NCBI-ProteinID:  XP_009888519 LinkDB All DBs Position Unknown AA seq 1461 aa AA seqDB search MMSFVQKVTLLILAVFQPSVILAQQDALGRCTHLGQVYADRDVWKPEPCQICVCDSGSVL CDDIICDDQELDCPNPEIPFGECCPVCPQTTPQPTTTPGVVSRGPKGDPGSPGVPGRNGA PGPPGQPGTPGAPGPPGICQSCPSISGGSFSPQYDSYDVKAGSAGIGYPQPISGFPGPPG PSGPPGPPGHAGPPGSAGYQGSPGEPGQPGPPGPPGPVGMIGPVGPPGKDGEPGRPGRNG DRGIPGLPGHKGHPGMPGMPGMKGQRGFDGKDGARGESGAPGPKGETGLPGANGSPGQPG PRGPAGERGRPGNPGGPGAHGKDGSPGAAGPPGPPGPPGTAGFPGSPGFKGEAGPPGPAG SSGSPGERGEPGPQGHAGPPGPQGPPGRAGSPGNKGEMGPSGIPGAPGLPGGRGLPGPPG TSGNPGAKGSPGEPGKNGAKGDPGPKGERGENGTPGAPGPPGEEGKRGANGEPGQNGVPG TPGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGERGQDGGPGLPGMRGLPG IPGSPGSDGKPGPPGNQGESGRSGPPGPPGPRGQPGVMGFPGPKGNEGAPGKNGERGPGG PPGTPGPAGKNGDVGLPGPPGPSGASGERGEPGPSGPPGLQGLPGGPGPAGENGKPGEPG PKGDIGGPGFPGPKGENGIPGERGAQGPPGPPGTRGGPGPAGSEGAKGPPGPPGPPGGTG LPGLQGMPGERGASGSPGPKGDKGEPGGQGAEKNPGARGERGNVGPIGPPGPAGPPGDKG ETGPAGAPGPMGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGEAGPPG AAGPQGGPGAPGPPGPQGTKGERGSPGGPGAAGFPGARGLPGPPGNNGSPGPPGNAGPAG KDGPPGPPGGPGSPGSPGPSGTRGEPGSPGEKGPPGARGERGAPGEPGPQGIVGGRGNTG LPGLRGPSGPPGMGGAKGEDGKPGTNGVPGERGAPGPQGPIGQRGLPGEPGRDGNPGSDG LPGRDGSPGGKGDRGESGSPGPPGPPGHPGPAGTSGAPGKAGERGFQGPPGPPGSAGPAG ARGPAGPQGPRGDKGETGERGSNGIKGHRGFPGTPGLPGPPGPLGPQGAIGSPGASGARG PPGPAGPPGKDGTSGYPGPIGPPGPRGTRGESGPAGPPGQPGLPGPSGPPGPCCGGGAAI MGPGEKGPVGYGYEYRDEPKENDINLGDIISSMKSINNQIENIISPDGSRKNPARNCRDL KFCHPELKSGEYWIDPNQGCKMDAIKVYCNMETGETCLSANPSTVPRKNWWTSESSGRKH VWFGESMNGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYMDQASGN VKKALKLMSSTDSEIKAEGNSKFTYAVLEDGCTKHTGEWGKTVFEYRTRKTMRLPVVDIA PLDIGGPDQEFGVDIGPVCFL NT seq 4386 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaagtaactttgctcattcttgccgtgtttcaaccctcagtt attttggcacaacaagacgccttaggaagatgtacccatcttgggcaggtttatgctgac agggatgtttggaaaccagagccatgccaaatctgcgtgtgtgactcgggatctgttctg tgcgatgacatcatctgtgatgatcaggagctggactgtcccaacccagagattcccttt ggagagtgctgtccagtttgtccacaaacaacaccacaacctacaacaactcctggagta gtcagccgaggacccaaaggagaccctggttctcctggggttccaggcagaaacggtgcc cctgggcctccaggacagccagggactcctggagctcctggcccccctgggatctgccag tcgtgtcctagtataagcggcggtagtttttctccacagtatgattcctatgatgtgaag gccggttcagctggtatcggttacccacagcccattagtggctttccaggaccccctggc cccagtggcccccctggcccacctggtcatgcaggtccccctggctctgctggataccaa ggttcccctggagaaccaggacaacctggccctcctggacctccaggccctgttggaatg ataggcccagttggtccaccaggaaaagatggagaaccaggaagaccaggcagaaatgga gaccgtggaatccctggattaccgggtcacaagggacaccctgggatgcctgggatgcct gggatgaaaggtcaacgaggctttgatggaaaagatggtgccagaggtgaaagcggtgct cctggtccaaagggtgaaactggtcttcctggagcaaacggatcaccgggccaaccggga ccaagaggtccagctggtgaaagaggaagacctgggaatcctggtggccctggtgcccat ggcaaagacggatctccaggagcagcaggcccacctggtcccccaggtccccctggaact gcaggatttccaggctctccaggttttaagggtgaagctggtcctcctggtcctgctggt tctagcggtagtcctggagagagaggagaacctggtcctcagggtcatgctgggccaccc gggcctcagggccctcctggaagagctggaagccctggcaacaagggtgaaatgggacct tctggtattcccggtgctcctggtctgccaggaggccgtggtctccctggccctccaggt acaagtggaaaccctggcgcaaaaggcagtccgggagaacctggtaagaacggtgcaaaa ggagatccaggcccgaaaggcgagcgtggtgaaaatggcaccccaggtgctcctggacct cctggtgaggaaggcaaaagaggtgcaaatggtgaacccggccagaatggcgtacctggt acacctggagaaaggggctctcccggtttccgtggtttacctggtagcaatggacttcca ggtgaaaagggtcctgcaggtgaacgtggtagcccaggtcctcctggccccagtggaccc gcaggagagcgtggacaagatggaggcccaggccttcccggaatgagaggtttgcccgga attccaggaagccctggaagcgatgggaagcctggccctccaggtaatcagggtgaatct ggccgctctggtccacccggccccccgggcccacgtggtcaaccaggtgtaatgggtttc cctggtcctaagggcaatgagggtgcaccgggtaagaatggagaaagaggccctggtgga ccacctggaacacctggtcctgctgggaagaacggtgatgttggccttccgggtcctcct ggacctagtggtgcttctggggagagaggagaaccagggccatcaggtccacccggtctc caggggttgcctggtggaccaggaccagctggagaaaatggaaagcccggagaaccaggg ccaaaaggtgatattggaggacccggattcccaggccctaagggtgaaaatggtatccca ggtgaacgtggtgcacagggtcctccaggacctcctggaacaagaggtgggccaggtcct gctggctcagaaggtgccaagggtcctcctgggccccctgggccccctggaggcacaggg ctgcctggcttacagggaatgccaggggaaagaggagcttctggaagtcctggaccaaaa ggggataagggagaacctggtggccaaggggctgaaaaaaatcctggcgcaagaggggag agaggtaatgtaggtcccatcggtcctcctggtcctgccggcccacctggagataaggga gagactggtccagcaggtgccccaggtccaatgggttcccgtggtggtcctggtgaacga ggagaacaaggtcttcctggacctgctggcttccctggagctccaggccagaatggggaa cctggtgggaaaggagaaagaggcccacctggtctaagaggagaggctggacctcctgga gctgcaggtccacaaggtggtcctggtgcaccaggtccacctggtcctcaaggaacaaaa ggagaacgtggatctcctggaggccctggtgctgctggtttccctggtgctcgtggtcta cctggtccccccggtaacaatggtagtccaggtccccctggtaacgcagggcctgcaggc aaggatgggcctcctggaccccctggtggtcctggttctcctggcagtccaggaccttct ggtacaagaggtgaacctggctcaccaggtgaaaaagggccacctggcgcacgaggagaa aggggggcaccaggagaaccaggtcctcagggcatcgttggtggacggggcaacacaggt ttgccaggtctgcgtggcccgagcggcccacctggtatggggggtgccaagggtgaagat ggtaaaccgggcaccaatggtgtcccaggagaacgcggtgctcctggtccacaaggtcct attggacaaagaggcttacctggagagcctggcagagatggtaaccctggctcagatggc ttgcctgggcgtgatggatccccaggaggcaaaggtgaccgtggtgaaagtggctctcct ggccctccgggacctcctggtcaccctggacctgcagggaccagtggtgcacctggaaaa gctggtgaaagaggatttcagggtccacctggccctcctggctctgctggtcctgctggt gctcgaggtcctgctggtcctcaaggtcctcgtggtgataaaggtgaaactggtgaaaga ggcagcaacggcataaagggtcatagaggatttcctggtacccccggtctccctggtcct cctggtcccctgggtccacaaggtgcaattggaagtccaggagcttcgggtgcaaggggt cccccaggaccagctgggccacctggaaaagatggtacaagtggctatccgggtccaatt ggtcctcctggccctcgcggtaccagaggtgaaagtggccctgcaggtccaccaggccag cctggtcttcctggtccttctggtcctcctggtccatgttgtggtggtggtgcagctatc atgggtcctggtgaaaaaggtccagtgggctacgggtatgaatatcgagatgagccaaaa gaaaatgatatcaatctgggtgacatcatatcttcaatgaaatcaattaacaaccagatt gaaaacatcattagtcctgatgggtcacggaagaatccagctcgtaactgcagagacctg aaattctgccatccagagctcaagagtggagagtactggattgatcctaaccaaggctgc aagatggatgctattaaagtatactgtaatatggaaactggtgagacgtgcctcagtgct aaccccagcactgtgccaaggaaaaactggtggaccagcgaaagcagtggaaggaaacat gtttggtttggagaatctatgaacggaggcttccagttcagctatggagatcctgagctt ccagaggatgtctcagaagttcagctggccttcctccgcatcctctcaagccgtgcctcc cagaacatcacctaccactgcaagaacagcattgcctacatggaccaagccagtggaaat gttaaaaaagctctgaaactgatgagctctacagacagtgagatcaaggccgaaggaaac agcaaattcacctatgctgttctggaagacggctgtactaaacacactggtgaatggggt aaaacagtctttgaatacagaacgcgcaagacaatgagattgcctgtggttgatattgca cccttagatattggtggtcctgatcaggaatttggcgtggacattggcccagtctgcttc ttataa

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