Charadrius vociferus (killdeer): 104291023
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Entry
104291023 CDS
T08577
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104291023 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cvf01007
]
104291023 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvf03016
]
104291023 (FARSB)
Enzymes [BR:
cvf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
104291023 (FARSB)
Amino acid related enzymes [BR:
cvf01007
]
Aminoacyl-tRNA synthetase
Class II (U)
104291023 (FARSB)
Transfer RNA biogenesis [BR:
cvf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104291023 (FARSB)
Prokaryotic type
104291023 (FARSB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
Motif
Other DBs
NCBI-GeneID:
104291023
NCBI-ProteinID:
XP_009888526
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSTGTGRLLRHMADEEFNELCFEFGLELDEITSEKDIISKEKGEEKAKGASDTVLYKIDV
PANRYDLLCLEGLVRGLQVFKERINLPRYEKIIPAQGEGQRLIITEKTVQVRPHAVAAVL
RNITFNKERYDSFIDLQEKLHQNICRRRALVAIGTHDLDTISGPFTFTAKAPSEIKFRPL
NQSQEYTASQIMDLYRTDSHLRHYLHLIENKPLYPVIYDSNGVVLSMPPIINGDHTKISV
KTRNVFIECTGTDITKAKIVLDIIVTMFSEYCEKPFSVEAAEVVYPNGKTHIYPELAYRK
EKVKPELINKKIGISETPSSLAKLLTRMCLKSHVIGNGNNIEIEIPPTRADIIHACDIIE
DAAIAYGYNNIQMTIPKTYTIANQLPLNKLTELLRLDLAAAGFTEALTFALCSQEDIADK
LGMDISATKAVHIANPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDIVVKDPN
TDVGARNYRHFCAIYYNKSPGFEIIHGLLDRVMQLLEVPPNEENGYTIKATEGSAFFPGR
CAEIFAKGQSIGKLGVLHPDVITKFELTMPCSALEINIEPFV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagcactggaactggcaggctcttaagacacatggctgatgaagaatttaatgagctg
tgctttgagtttggtttggagcttgatgaaattacatctgagaaagacattataagtaaa
gaaaaaggtgaagaaaaggcaaagggtgcatctgataccgttctctataaaattgatgtt
cctgcaaaccgttatgatcttctttgccttgaagggctggtccgaggactgcaggtcttt
aaagaaaggataaatctccctaggtatgaaaaaataataccagctcagggtgaaggtcag
aggctgattatcactgaaaagactgtccaagtccgtcctcatgccgtggctgcagtcctt
cgtaatataacttttaacaaggaacgttatgatagcttcattgacctccaagaaaaacta
caccaaaatatttgcaggagaagagcgttagtagcaataggtacccatgacttggacacc
atctctggtccatttactttcacagctaaagcaccttctgaaattaaattcaggcccttg
aatcaatcccaggagtacacagcttcacaaattatggatctctataggactgacagccac
cttcggcactatttacacctgatagaaaacaagccactttatcctgtcatttatgacagc
aacggtgttgttctgtccatgccaccaatcatcaatggagatcatacaaaaataagtgta
aagaccagaaacgtcttcattgaatgtacaggcacagatattacaaaggcaaaaattgtt
cttgatattatagtcacgatgtttagtgaatattgcgagaagccattcagtgttgaagca
gcagaagtggtttatcccaatgggaagacccacatctatccggaactggcttaccgaaaa
gagaaggtgaaacctgaacttattaacaagaaaataggaatcagtgaaactccatcaagc
cttgcaaagctgctgaccaggatgtgtttgaagtcacacgtcatagggaatgggaacaat
atcgagattgaaatccctcctaccagagcagacattatccatgcatgtgatatcatagaa
gatgcagcaatagcttatggttataacaacattcagatgactattccgaaaacgtacacc
atagctaatcaactccccctcaataagctcacagaacttctgagactggacttggcagct
gctggattcactgaagcactcacttttgccctgtgttctcaagaagatattgcagataaa
cttggcatggatatctctgcaacaaaagcagtgcacatagcaaaccccaaaactgcagaa
tttcaggtggcacgtacaaccctccttcctgggctactgaaaacgatcgctgctaaccga
aagatgcccttgcctctgaaactctttgagatttctgacattgtagtaaaagatcctaat
acagatgtaggtgcaagaaactacaggcatttctgtgcgatttattacaacaagagccct
gggtttgagattatccatggtttgctggacagggtcatgcagcttcttgaagtaccacca
aatgaagagaacggctacaccatcaaggcaactgaaggctctgctttctttcctggtcgc
tgtgctgagatctttgccaaaggtcaaagcattgggaaacttggagtcctacaccccgat
gttatcaccaagtttgagctcaccatgccgtgctctgccctagagatcaatattgagccc
tttgtgtga
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