Charadrius vociferus (killdeer): 104291194
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Entry
104291194 CDS
T08577
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvf04040
]
104291194 (PKD1L2)
Ion channels [BR:
cvf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104291194 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Lectin_C
Gal_Lectin
Ion_trans
GPS
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
104291194
NCBI-ProteinID:
XP_009888695
LinkDB
All DBs
Position
Unknown
AA seq
2504 aa
AA seq
DB search
MTSQAFEEGSKRSGDVKSKTSATQGTELRMWLGIAVLISLAVCLAVEEAIVDEGIPCSKY
QLAFNHSCYEFVRLQRTFTSAQSWCERGGGHLVFIENEETQEFLQKHIAEDQEWWIGLIS
NSLLNETTDGSMIWLDTSNINYSNWYNDQPPPFSSTCGYILKNANYQWGVTENCSQEFDF
ICEFEFGQSIACDNYNATVQCGSGEVIQIGESFYGRKTPHYCVSETPLQYDTDEDCSWIS
VKDEVAGQCHGLQACQVAADGFFFGDPCPASGSYLSIQYHCKEGLQLVVTDTCFVFENIT
VGLNWLLSPYSGNLSCIISTGDGHTIDPYYPLTPVSNVTYRYLSPGEFIVFVECTTSEWH
VMAQKRVTVEDKMDQLSITGCYSQYESGNSSLCRTLYGELLWIQVELNGGNGVTYMILAD
NMTLAESCVKEGMVSHNLTLDSASQELLGPGIHQLEIRASSNTTASEISDRIAVHLIEPV
SGLRAALASHALQLGENLEINVSVSHGAPDKLKFEVIGSNEMHSHKDDGPHGEPQTYIVP
MRSEGTFLVRVVAMNAFSNMSLDLGFITVLANTSHKEDSAKEEGSSKANTQKTNDHKRKN
KIYIKPSRHVDPFTTVTLGWPDNNNNSSFLWSCGACWPEWNECVQQQIIPTNQTEVQIPP
SCLPPPKSAVTVRVTVQTHDDEERQDEQCLYVTAKQELQLEIRCEANCKPVNVSDEVILS
VSGQKDSQAIYYNWYLDNTFQTKSTPLPLACGLTGFRQNSLNLLQSNTSVLKMNSSFLQT
QGEAFQIKVTAMTQRGYGEETYLVSTVPPPEIPSCAVSPKQGSVLTTFTVSCSAPCLAES
CQSSHNRQLTYCFYLKSNSLLHCGPDPELFPVYLPLGEKDNNFILHMTITVSNNYGDTVQ
TNASVKVGHADMIDGNLTLQAIVSEKANTILKDGDNSMSLFQLYKSVISALNQETQEESF
NISLQMDTRKELRGLMLTTLSAVNVTSVQTALKMSEILKEITYRSKELSVSAQVEASNTL
KDVSASLLTVNTEDSRDDQKLKDAANYLFNAVSNVLKASVEIRAMNTSVPEAEQSSVSHQ
LLNTVENLQSALLFGKEPDDEPTVLTTPSATMYINRLQTENMDGTSINISNSSSASFTLP
PASSLSVSGVDDETVDIRMVSFAVNPFFSSDTSFDISGAVGGLSLTGLDGLIIPVSNLKE
NIEITLPRLSAAQEDRILLNLGNFSTFQVNVTSENTSIVIHLESEHDIPLILYLGYGYRP
NETNYDMKNHLFCKKNTGGETNTWVLSPEELILGEGTYYFMVLQDMGMDSTVYDNLTIAI
TCFASRCVFWDEHQQNWNSYGCHVGAKTNPRSTQCFCNHLTFFGSSFFVIPNAIDVSKTA
QLFGTFVDNPVVVTTVGCIFLIYVLVVIWARRKDIQDDAKVKITVLEDNDPFAQCRYLVT
VFTGHRRGAATTSKVTLTLYGLEGESEPHHLTDPDTPVFERGGVDVFLLCTFFPLGELQS
IRLWHDNSGDSPSWYVNRVLVHDLAWDQKWYFLCNSWLAVDIGECVLDKVFPVATEQDMK
QFSNLFFMKTSKGFQDGHIWYSVFSRSPRSSFTRAQRVSCCFSLLLCTMLTSIMFWGVPK
DPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNIRSRPATEAREKKPGKNG
RVSPSLPPNPQVTQAVSLTPETDIRRIANSLFKALKSPSLTSVSDLGKSTNINTLLALVE
DIICQQNRAGQEFYDESRKKDDPIIVTLGAMDIQEKPRSPTPEKGMCEQLKYSDYNRCLY
VQLQHVEMELELLGPHKFQVPQSYTQAVRQVQHMKNLLKNRICSSAWSLTASFSGGGKKN
SSSKGLPWWFVFIAWFLVAATSGVSGFFTMLYGLHYGKENSIKWLISMAISFLESLFITQ
PLKVLGFAAFFALVLKKVEHEDEENTAIDGPLSTPGDSNPLFGARRDSRSNIYRPPPAAD
VEKMKISCIKEQKAFALIREILAYLGFLWMLLLVAYGQRDPNSYYLNKHIENSFTDGFND
VYSYQDFFSWANTTLVKNLYGSYKGFITDGNSKLVGSARIRQVRVKGDTCPISPKLQHVI
QECHAPYFLQTEDTSDYGEHWNASVFDNSSNLSSAWQYQSQSKLRGHPIWGKLAVYRGGG
YMIHLGTDPKNASRILQYLFNNIWLDTFTRAVFVEFTVYNANVNLFCIISLMFETNALGA
FFTSAELQSVRLYPYTNSLHIFVVAAEVIYFLFIVYYMIIQGKLMKTLRWRYFHSKWNVL
EMAIILMSWSALSVFVKRTILGTRDISYYQEHKEDCVSFNETARADAVLGYLIAFLVLLS
TVKLWHLLRLNPKLNMITSTLRRAWGDISGFITVIAIMFLAYSIATNLIFGWKLYSYKTL
FDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGSCIIFMTFVVLNLFISVILVAFSEEQK
HYQASEEEEIVDLMLMKLFSFFGIKCKKEEKPVTNDQLEEPVNN
NT seq
7515 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcaagcttttgaagaaggcagcaaaaggagcggtgatgtgaaaagcaagacg
agtgccacacagggcactgagctgagaatgtggcttgggatcgcagttctaatttctctt
gctgtatgtttggctgtggaggaggcaatcgttgatgaaggaatcccttgctcaaagtac
cagctagctttcaaccattcatgctatgagtttgttagactccagcgtaccttcacaagt
gcccagagctggtgtgagagaggaggagggcaccttgtctttattgaaaatgaggaaact
caagagttcttgcaaaaacatattgcagaggatcaggaatggtggataggactgatctca
aactccttgctgaatgaaactactgacgggtcaatgatttggctggacacttcaaatata
aactacagtaactggtacaatgatcagccacctcccttctcatccacatgcggatacata
ctgaagaatgccaactatcagtggggtgtgactgaaaattgcagccaggaattcgacttc
atttgcgagtttgaatttggccagagcattgcttgtgataattacaatgccactgtacag
tgtggatcaggagaagttattcaaattggagagagcttctatggacggaagacccctcac
tactgtgtatcggagactcctctccagtatgatacagatgaagactgtagctggatcagt
gtcaaagacgaagtagcaggccaatgtcatggtcttcaggcctgccaggtggcagcagat
ggctttttctttggagatccttgtccagcttctggaagctatttgtccattcaataccac
tgcaaggaaggtctgcagctggttgtaacagatacatgctttgtctttgaaaatatcacg
gtcggtttgaactggctgctctctccatactctggcaacctttcctgtatcattagcact
ggagatggccacactatcgacccttactaccctctaacaccggtcagcaatgtcacgtat
agatatttatctcctggagaatttattgtttttgtggaatgcaccaccagcgaatggcat
gtgatggcacagaagcgggtgactgttgaagataagatggatcagctaagcattactggg
tgctatagccagtatgaatctgggaacagctctctctgccgtacactgtatggggagttg
ctgtggattcaagttgaactcaatggaggcaatggagtgacctacatgatattagcagat
aacatgacactcgctgaatcctgtgtaaaggaaggaatggtctctcacaatctgacactt
gacagtgcctctcaagagctgctaggcccagggatacatcaactggaaatccgagcatcc
agcaacacaaccgcatcggagatctctgaccgcattgctgttcacttaattgagccggta
tctggtcttcgggctgcattagcttctcatgctctgcagctgggggagaatttggagata
aatgtctctgtgtctcatggtgccccagataagctgaagtttgaggtgattggatctaat
gaaatgcactctcacaaagatgacggccctcatggggaacctcaaacgtatatcgttccc
atgcgctctgaaggtactttccttgtgagagtggtggccatgaatgccttttcaaacatg
agtctggatcttgggttcatcactgtgttggcaaacacttctcataaagaagattctgct
aaggaagaaggtagctccaaagcaaatacccaaaagacaaatgatcacaaaagaaaaaac
aaaatatatattaaaccgagtcgccatgtggaccctttcacaactgttacgcttggctgg
ccagacaacaacaataattccagttttctctggtcctgtggagcttgctggcctgagtgg
aatgaatgtgtgcagcaacagataatcccaaccaaccaaactgaggtgcaaatcccacct
tcctgccttcctcctccaaagtcagcagtgactgtcagggttacagtccaaacccacgat
gatgaagagaggcaagacgagcaatgtctctatgtcactgcaaaacaagaactgcaacta
gaaatcaggtgtgaggcaaactgcaagccagtgaatgttagtgatgaagtcattttgagt
gtctctggacagaaggactcccaggccatatattataactggtatttagataacacattc
caaaccaagtctacacccctccctctagcctgtggcctgactggtttccggcagaactct
ttgaatttgcttcaaagcaacacatccgtgttgaaaatgaacagctccttcttgcagaca
cagggagaagcttttcagattaaagtaacagcaatgactcagcgtggctatggggaggaa
acgtaccttgtcagcaccgtgcctccgcccgagatccccagttgtgccgtgtctcccaag
cagggatcagtgctcaccacgttcacagtctcctgcagcgctccttgcttggcggagtca
tgccaatccagtcataacaggcagctcacatactgcttctacctgaaatcaaattctctc
ttgcactgtggcccggatcctgaactcttcccagtttatcttccacttggagaaaaggat
aataatttcattttacatatgacaattactgttagcaacaactatggtgatacggttcaa
acgaatgcttcggtgaaggttggacatgcagatatgatcgatgggaacctcaccctgcag
gctattgtatctgagaaggcaaacaccatcctcaaagatggggacaacagcatgagcctt
ttccagctgtataagtcagtgatatcagcccttaatcaggagacccaagaagaaagcttt
aacatatctttacagatggacacacgaaaagagctccgagggctgatgctgacaactctc
tctgctgttaatgtaacatcagtgcagactgctcttaagatgtcagaaatattgaaagaa
atcacttacaggagcaaagagctgtctgtctcagcacaggtggaagctagcaacactcta
aaagatgtcagtgcttccttgctcactgtaaacacagaggacagcagagatgatcagaag
ttaaaagatgcagccaactatctatttaatgcagtaagcaatgttcttaaagcttctgta
gaaatcagagctatgaacacttcagtgccagaggcagaacagagttcagtgtcgcaccag
ctcctgaatacagttgaaaatctacagagtgcccttctgtttgggaaagaaccagatgat
gaaccaacagtccttaccactccttccgccacaatgtatataaacagattacaaacagaa
aacatggatggcacatccattaatatctccaattccagctctgccagctttactctccca
cctgcttcctctctcagtgtttcaggagttgatgatgaaacagtggatataaggatggtg
agctttgccgtgaatccctttttctccagcgacaccagttttgacatcagtggagcagtg
ggaggcctaagtcttactggtctggatggcttgatcataccagtcagcaatctcaaagaa
aacattgaaataacgttgccaaggctttcagcagctcaggaggataggattctgttgaat
ctgggcaattttagcacttttcaagtcaatgttacctcagaaaacacatctatagtgatc
cacctggaatctgaacatgacattccactaatactctacttagggtatggttatcgtcca
aatgaaactaactatgatatgaaaaatcatctgttctgtaagaaaaatactggaggtgag
acaaacacctgggttcttagcccagaagaactcattttgggagagggaacctactatttc
atggttttacaagacatgggaatggattccacagtctatgacaacctaactatagctatc
acttgctttgcatcccgctgcgtattttgggatgagcaccagcagaactggaacagctat
ggatgtcatgtaggagcaaaaacaaatcctagaagcacacagtgcttctgcaaccatctg
accttctttgggagctccttctttgtcatacccaatgccatagatgttagcaaaactgca
cagctatttggtacatttgtggacaaccccgtggtggtgacaactgtaggatgcatcttt
ctgatatatgtgcttgtagttatttgggctcgaaggaaagacatccaggatgatgccaaa
gtgaaaatcacagtactggaagacaatgacccctttgctcagtgtcgttatctcgtgaca
gtttttacaggacaccgccgcggggcagccacaacctccaaggtgactctcaccctctat
ggactggaaggagaaagtgagccacaccatctaactgatcctgatacaccagtctttgaa
cgtggaggagtggacgttttcctgctctgcaccttcttccctcttggggaactgcagagt
attagattgtggcatgataattcaggggacagtccatcctggtatgtgaatcgagtattg
gtccatgatctggcatgggatcagaaatggtacttcctctgtaactcttggctagcggtt
gatattggagaatgtgtcctagataaagtgttcccagtagctacagaacaggacatgaag
cagttcagcaatctgtttttcatgaagacctccaagggtttccaggacgggcacatctgg
tactcagttttcagccgctccccacgaagctccttcacacgagcccagcgtgtgtcatgt
tgcttctcactgcttctctgcaccatgctgaccagcatcatgttctggggagtgccaaag
gatccagccgagcagaaaatggatttgggtaagatcgagttcacatggcaggaagtgatg
attggctttgagagctccctcctcatgttccccatcaacctgctcattgtgcagatcttc
aggaacatacgatcccggccagccacggaggcaagagagaagaagccgggaaagaacggt
cgagtgtccccaagtctacctcccaacccacaggtcacccaggctgtctcgctcactcca
gagactgatataagaagaattgccaactcactctttaaagccctgaagtctccatctctc
acttcagtatcagatcttggaaaatcaactaacatcaacacactattggcattggttgag
gacatcatctgccagcagaacagagctgggcaagagttttatgatgagagcagaaagaag
gatgaccctataattgtcacattaggtgctatggatatacaagaaaaaccaagaagccca
actccagagaagggaatgtgtgagcaactgaaatacagtgattacaatcgctgcttgtac
gtgcaactccagcatgtagagatggagctggaattactggggccccacaaatttcaggtg
cctcagagttatacacaagcagttcgtcaggttcagcacatgaagaacctcctgaagaac
cggatctgctcatcagcgtggtcccttactgcaagcttttctggtggtggcaaaaaaaat
tcttcttccaaagggctgccctggtggtttgtgttcattgcttggttccttgttgcagcc
accagtggtgtatctgggttctttaccatgctctatgggctgcattacggcaaggagaac
tccatcaagtggctgatctccatggccatctccttcttggaaagtcttttcatcacacag
cccttaaaggtgctgggatttgctgctttttttgctctggttctgaagaaggtggaacat
gaggatgaagaaaacacagctattgatgggcctttatccacaccaggtgattcaaatcct
ctttttggagcccgaagggacagtagaagcaatatttaccggccacctcctgcagctgat
gtggaaaaaatgaaaatcagctgcataaaagagcagaaagcatttgccctcatcagagaa
atcctggcctatctggggtttttatggatgctgttactggttgcctatgggcagagagat
cccaattcctactacttaaacaaacacattgagaacagctttacagatggattcaatgat
gtctacagttatcaggattttttctcgtgggcaaacactaccttagtcaaaaatctttat
ggatcatataaaggattcattacagatggcaattccaagctggtgggtagtgctcgaatt
cgccaagtaagagtgaaaggagacacctgccctatttctcccaaactccagcatgtgatt
caggaatgtcatgctccatatttcttacaaacagaagatacatcagattatggggaacac
tggaatgcttcagtctttgataactcctctaacctgagctcagcatggcagtatcagagt
cagtccaaactgagagggcaccccatttggggcaaactggccgtctacaggggaggggga
tacatgattcacctgggaactgatcctaagaatgcctccagaattctccagtaccttttc
aacaacatctggctagacaccttcacaagagcagtgtttgttgaatttacagtctacaat
gccaatgtgaacctgttctgtattataagcctgatgtttgaaaccaatgctttaggggcc
ttcttcacaagcgcagagctgcaaagtgtccggctttacccatacaccaacagtctccat
atctttgtggttgcagcagaagtaatttatttcctctttattgtgtactacatgataata
cagggaaaactgatgaagactctgagatggagatacttccacagcaagtggaatgtcctg
gagatggccattatattgatgagctggagtgccctgtcagtgtttgtgaagcggacaatc
cttgggacccgagacatcagctactaccaggaacacaaagaggactgtgtaagctttaat
gaaacagcaagagctgatgcagttcttggctacctgattgcattcctagtgctcctctcc
acagtgaaactgtggcatctcctgaggctcaaccctaaactaaacatgatcacttcaact
ctaaggagggcatggggtgatatctctggattcatcactgttattgcaatcatgttcctc
gcctattccattgctacaaacttgatatttggctggaagctctactcttacaaaactctc
tttgattcagcagagaccatggtcagtcttcagctaggaatcttcaactatgaggaggtc
ttggactacaatccaattttaggctccttcttaattggatcctgcataattttcatgaca
tttgtggtactgaatctgttcatttcggtgattctggtcgcttttagtgaggagcagaag
cactatcaggcttcagaagaagaggagattgttgatctaatgctaatgaaacttttcagt
ttcttcgggattaaatgcaagaaagaagagaaaccagtcacgaatgatcaactggaagaa
cctgtcaacaattag
DBGET
integrated database retrieval system
