KEGG   Charadrius vociferus (killdeer): 104291265
Entry
104291265         CDS       T08577                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    104291265 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvf03400]
    104291265 (WDR48)
DNA repair and recombination proteins [BR:cvf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     104291265 (WDR48)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Ubl_WDR48-Bun107 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd DSE1_N Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 Beta-prop_WDR41 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 ASA1 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_NOL10_N TRM82_WD CFAP251_N Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_NWD2_C WDR54 WD_LRWD1 Beta-prop_Vps41 Beta-prop_VPS8 WD40_RFWD3 PAC11 Beta-prop_ACSF4 WD40_like Nucleoporin_N Tfb2_C C10orf126
Other DBs
NCBI-GeneID: 104291265
NCBI-ProteinID: XP_009888777
LinkDB
Position
Unknown
AA seq 700 aa
MEPSARKRHGPVGVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHK
QDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKAL
AYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVI
VSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQR
CIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELD
RSADPPPALWVATTKSSVNKWTLKGIHNFRASGDYDNDCTNPIPPLCTQPDQVIKGGASI
IQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWFSVD
LKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHINPMD
EEENEINHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLN
ETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEK
IINLDNESQTTSSSNNEKAGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHFLWE
PSAGLCSEGTQSFSDQMRSQRLPASIVDGASNFDQYVTPG
NT seq 2103 nt   +upstreamnt  +downstreamnt
atggagccttcagcacggaaaagacatggacctgttggagtctcctatgtgattagagat
gaagtggagaagtataaccgaaacggggtaaatgcacttcagctggatccagcattaaat
agactcttcacagcaggccgagactctattataaggatatggagtgtcaatcagcacaag
caagacccctatatagcatctatggaacatcacacagattgggtaaatgatattgtgctc
tgctgtaatggtaaaacattgatatctgcttcttcagatactactgttaaagtgtggaat
gcgcataagggattttgcatgtcaacactaaggacacataaggattatgtgaaagcctta
gcatatgcaaaagataaagaactggtagcatctgcagggctggacagacagatattcctc
tgggatgtaaatactctaacagcactgactgcctcaaataacaccgtaacaacttcttcc
ctgagtgggaacaaagactccatctacagccttgcaatgaatcagatgggaacagtcatt
gtatcagggtccactgaaaaggttctaagggtgtgggatccaagaacttgtgcaaaacta
atgaaactcaaagggcacacggacaatgtaaaagctttgttgttgaacagagatggcact
cagtgtctttcaggcagctctgatgggactatccgcctgtggtcccttgggcagcagaga
tgtatagccacatatcgagtccatgatgaaggtgtttgggctctgcaggtcaatgaagcc
ttcactcatgtttattcaggaggaagagacaggaagatttattgtacagatttacgaaat
cctgatatccgtgtgcttatctgtgaagaaaaggcaccagttcttaagatggaacttgat
agatcagctgatcctcctccagcactttgggttgcaacaacgaaatcctctgtgaataaa
tggactttgaagggaattcataattttagagcatctggagattatgataacgattgtacc
aatcctataccacccctgtgtacacagcctgaccaagttataaaagggggtgctagtatt
attcagtgtcacattcttaacgacaagagacacatattaaccaaagacacaaataataat
gtggcatactgggatgtcttgaaggcatgtaaagttgaagaccttgggaaagtagacttt
gaagaagaaattaagaagagatttaaaatggtgtatgtgccaaactggttctcagtagac
ttgaaaactgggatgttgaccattactttggatgaaagtgactgctttgcagcctgggtt
tcagcaaaggatgctggatttagcagtccagatggttctgatccaaaattaaaccttgga
gggcttctgctacaagcgcttctggagtattggcctagaacacatatcaatccaatggat
gaagaagaaaatgaaataaatcatgtgaatggtgagcaggagaacagagtccagaaagga
aatggatactttcaagtgccaccacatacaccagttatttttggtgaggctggaggacgc
actttgttcaggttattgtgtcgggattcgggtggcgaaactgaatctatgcttctaaat
gaaactgtgccacaatgggtaattgacatcactgtggataaaaatatgcccaaattcaat
aagattcccttctacctccaaccgcattcatcatcaggggcaaaaactctaaagaaagac
cgactgtcagccagtgatatgcttcaggtgagaaaagtgatggaacacgtgtatgagaaa
atcataaacttggataatgagtctcagacaactagctcttccaataatgaaaaagcagga
gaacaagaaaaagaggaggacattgctgtgctggcagaggagaagattgaacttctgtgc
caggaccaagttttggatccgaatatggaccttcgaactgtaaagcattttctgtgggaa
ccgtcagctgggctgtgctcggaggggacacagtcattcagtgaccagatgcgttcccag
agactcccagcatccatcgtggatggagcgtcaaattttgaccagtacgttacaccaggg
tag

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