KEGG   Charadrius vociferus (killdeer): 104291348
Entry
104291348         CDS       T08577                                 
Name
(RefSeq) thrombospondin-3b-like
  KO
K04659  thrombospondin 2/3/4/5
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf04145  Phagosome
cvf04510  Focal adhesion
cvf04512  ECM-receptor interaction
cvf04518  Integrin signaling
cvf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104291348
   04518 Integrin signaling
    104291348
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104291348
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104291348
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104291348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvf04131]
    104291348
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvf04147]
    104291348
   00536 Glycosaminoglycan binding proteins [BR:cvf00536]
    104291348
Membrane trafficking [BR:cvf04131]
 Endocytosis
  Phagocytosis
   Opsonins
    104291348
Exosome [BR:cvf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104291348
  Exosomal proteins of colorectal cancer cells
   104291348
  Exosomal proteins of bladder cancer cells
   104291348
Glycosaminoglycan binding proteins [BR:cvf00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104291348
SSDB
Motif
Pfam: TSP_3 TSP_C COMP EGF EGF_MSP1_1 Laminin_G_2
Other DBs
NCBI-GeneID: 104291348
NCBI-ProteinID: XP_009888874
LinkDB
Position
Unknown
AA seq 726 aa
EARQMASITHKIRMELLTVNDVYLLSTFRLPPKQGGTLFGLYSKKDNTRWLEVSVVGKIN
KVLVRYLREDNKLHSVNLQHAHVADGQSHNIIVRLSGLRGDMLSVELYVDCKQMDSSVGL
PELSEIPLAEVESIEVRTGQKAYQRMQGFVESMKLILGGSMSRVGALSECPFQGDESIHS
AVTSVLASILGEQTKALVTQLTLFNRVLTELREDIRDQVKEMSLIRNTIMECQVCGFHEH
RSRCNPNPCFPPLSPAWRPGAELPPQILPPPFLSQGSYKCGPCKSGFTGNQTAGCVPQKS
CSTPTSNPSHVNGFCVFERNGEISCACNVGWAGNGNVCGQDTDLDGYPDEPLPCIDNNXX
XXQDNCRLTPNSGQEDADNDGIGDQCDDDADGDGSKNVEDNCRLFPNKDQQNSDTDSFGD
ACDNCPNVPNNDQRDTDSNGEGDACDNDIDGDGIPNMLDNCPKVPNPLQTDRDEDGVGDA
CDSCPEMSNPTQTDMDSDLVGDICDTNEDSDGDGHQDTKDNCAEIPNSSQLDSDNDGLGD
ECDNDDDNDGIPDYVAPGPDNCRLIPNPNQKDSDGNGVGDVCEEDFDNDTVVDQLDVCPE
SAEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDF
EGTFHVNTITDDDYAGFIFRYPGRRHTGPTPDHVRLLWKDPRNVGWRDKTSYRWQLTHRP
QVGYIR
NT seq 2182 nt   +upstreamnt  +downstreamnt
cgaggcccggcagatggccagcatcacgcacaagatccggatggagctcctgacggttaa
cgacgtttacctcctctccaccttccgcctgccccccaagcagggagggaccctcttcgg
cctctactccaagaaggacaacacaaggtggctggaggtctcggtggtggggaaaatcaa
caaagtcctggtgcgttacctgcgggaagacaacaaactgcactcggtcaacctgcagca
cgcgcacgtggcggacgggcagagccacaacatcatcgtgcgcctgagcgggctgcgagg
ggacatgctgagcgtggagctctacgttgattgcaagcagatggactccagcgtggggct
gcccgagctgtcggagatccccctggcagaggtggagtccatcgaggtgcgcacggggca
gaaggcctaccagaggatgcagggcttcgtggagtcgatgaagctcatcctgggagggtc
catgagccgcgtcggggccctgagcgagtgccctttccaaggagatgagtccattcacag
cgcagtgacgagcgtgctggcctccatcctgggcgagcagaccaaggcgctggtcacgca
gctcaccctcttcaaccgggtcctgaccgagctgcgagaagacatcagggaccaggtgaa
ggagatgtctctgatccgcaacaccatcatggagtgccaggtctgcggtttccacgagca
ccggtcccgctgcaaccccaacccctgtttcccgcccctctcccctgcctggcgtccggg
ggccgagctgcccccccaaattctacccccgccctttctctcccagggttcctacaagtg
cggtccctgcaagtcggggtttacggggaatcaaacggccggctgcgtcccgcagaagtc
ctgcagcactcccacctccaaccccagccacgtcaacggcttctgcgtgttcgagaggaa
cggggaaatttcctgtgcgtgtaacgtgggctgggctggcaacggcaacgtgtgcgggca
agacacggacctcgacggctacccggacgagcccctgccctgcatcgacaataacnnnnn
nnnnncgcaggataactgccgcctgaccccgaattcagggcaggaggacgctgacaatga
cggcatcggggaccagtgcgacgatgacgctgacggcgacggcagcaagaatgtggagga
caactgccggctcttccccaacaaggaccagcagaactcggacaccgactccttcgggga
cgcctgcgacaactgccccaacgtgcccaataacgaccagcgggacacggacagcaacgg
cgagggggacgcttgcgataacgacatcgacggggacgggattcccaacatgctggataa
ctgccccaaggtgcccaaccctctgcagacggaccgggacgaggacggcgtcggggacgc
ctgcgacagttgtcccgaaatgagtaatcccactcagacagatatggacagcgatctggt
aggagacatctgtgacaccaacgaggacagcgatggggacgggcatcaggacaccaagga
caactgcgctgagatccccaacagctcccagctggactcggacaacgacgggctggggga
tgaatgtgacaacgacgatgacaatgatggcatccctgactacgtggcacccggcccgga
caactgccgcctcatccccaaccccaaccagaaggattcggatgggaacggtgtgggcga
tgtgtgcgaggaggacttcgacaacgacacggtggtggaccagctggacgtgtgccccga
gagcgccgaggtgacgctgaccgacttccgcgcctaccagaccgtcatcctcgatcccga
gggggatgcccagatcgatcccaactgggttgtcctcaaccagggcatggagatcgtgca
gaccatgaacagtgacccgggcttggctgttggctacacggccttcaacggggtggactt
tgagggcaccttccacgtcaacaccatcaccgacgatgactacgccggcttcatcttccg
ctacccgggcagacgccacacgggccccacgcccgaccacgtccgcctgctctggaagga
cccacgcaacgtgggctggagggacaagacgtcctaccgctggcagctgacacacaggcc
ccaggtgggctacatcaggtga

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