Charadrius vociferus (killdeer): 104291348
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Entry
104291348 CDS
T08577
Name
(RefSeq) thrombospondin-3b-like
KO
K04659
thrombospondin 2/3/4/5
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04145
Phagosome
cvf04510
Focal adhesion
cvf04512
ECM-receptor interaction
cvf04518
Integrin signaling
cvf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104291348
04518 Integrin signaling
104291348
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104291348
09144 Cellular community - eukaryotes
04510 Focal adhesion
104291348
09142 Cell motility
04820 Cytoskeleton in muscle cells
104291348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104291348
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvf04147
]
104291348
00536 Glycosaminoglycan binding proteins [BR:
cvf00536
]
104291348
Membrane trafficking [BR:
cvf04131
]
Endocytosis
Phagocytosis
Opsonins
104291348
Exosome [BR:
cvf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104291348
Exosomal proteins of colorectal cancer cells
104291348
Exosomal proteins of bladder cancer cells
104291348
Glycosaminoglycan binding proteins [BR:
cvf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104291348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_3
TSP_C
COMP
EGF
EGF_MSP1_1
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
104291348
NCBI-ProteinID:
XP_009888874
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
EARQMASITHKIRMELLTVNDVYLLSTFRLPPKQGGTLFGLYSKKDNTRWLEVSVVGKIN
KVLVRYLREDNKLHSVNLQHAHVADGQSHNIIVRLSGLRGDMLSVELYVDCKQMDSSVGL
PELSEIPLAEVESIEVRTGQKAYQRMQGFVESMKLILGGSMSRVGALSECPFQGDESIHS
AVTSVLASILGEQTKALVTQLTLFNRVLTELREDIRDQVKEMSLIRNTIMECQVCGFHEH
RSRCNPNPCFPPLSPAWRPGAELPPQILPPPFLSQGSYKCGPCKSGFTGNQTAGCVPQKS
CSTPTSNPSHVNGFCVFERNGEISCACNVGWAGNGNVCGQDTDLDGYPDEPLPCIDNNXX
XXQDNCRLTPNSGQEDADNDGIGDQCDDDADGDGSKNVEDNCRLFPNKDQQNSDTDSFGD
ACDNCPNVPNNDQRDTDSNGEGDACDNDIDGDGIPNMLDNCPKVPNPLQTDRDEDGVGDA
CDSCPEMSNPTQTDMDSDLVGDICDTNEDSDGDGHQDTKDNCAEIPNSSQLDSDNDGLGD
ECDNDDDNDGIPDYVAPGPDNCRLIPNPNQKDSDGNGVGDVCEEDFDNDTVVDQLDVCPE
SAEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDF
EGTFHVNTITDDDYAGFIFRYPGRRHTGPTPDHVRLLWKDPRNVGWRDKTSYRWQLTHRP
QVGYIR
NT seq
2182 nt
NT seq
+upstream
nt +downstream
nt
cgaggcccggcagatggccagcatcacgcacaagatccggatggagctcctgacggttaa
cgacgtttacctcctctccaccttccgcctgccccccaagcagggagggaccctcttcgg
cctctactccaagaaggacaacacaaggtggctggaggtctcggtggtggggaaaatcaa
caaagtcctggtgcgttacctgcgggaagacaacaaactgcactcggtcaacctgcagca
cgcgcacgtggcggacgggcagagccacaacatcatcgtgcgcctgagcgggctgcgagg
ggacatgctgagcgtggagctctacgttgattgcaagcagatggactccagcgtggggct
gcccgagctgtcggagatccccctggcagaggtggagtccatcgaggtgcgcacggggca
gaaggcctaccagaggatgcagggcttcgtggagtcgatgaagctcatcctgggagggtc
catgagccgcgtcggggccctgagcgagtgccctttccaaggagatgagtccattcacag
cgcagtgacgagcgtgctggcctccatcctgggcgagcagaccaaggcgctggtcacgca
gctcaccctcttcaaccgggtcctgaccgagctgcgagaagacatcagggaccaggtgaa
ggagatgtctctgatccgcaacaccatcatggagtgccaggtctgcggtttccacgagca
ccggtcccgctgcaaccccaacccctgtttcccgcccctctcccctgcctggcgtccggg
ggccgagctgcccccccaaattctacccccgccctttctctcccagggttcctacaagtg
cggtccctgcaagtcggggtttacggggaatcaaacggccggctgcgtcccgcagaagtc
ctgcagcactcccacctccaaccccagccacgtcaacggcttctgcgtgttcgagaggaa
cggggaaatttcctgtgcgtgtaacgtgggctgggctggcaacggcaacgtgtgcgggca
agacacggacctcgacggctacccggacgagcccctgccctgcatcgacaataacnnnnn
nnnnncgcaggataactgccgcctgaccccgaattcagggcaggaggacgctgacaatga
cggcatcggggaccagtgcgacgatgacgctgacggcgacggcagcaagaatgtggagga
caactgccggctcttccccaacaaggaccagcagaactcggacaccgactccttcgggga
cgcctgcgacaactgccccaacgtgcccaataacgaccagcgggacacggacagcaacgg
cgagggggacgcttgcgataacgacatcgacggggacgggattcccaacatgctggataa
ctgccccaaggtgcccaaccctctgcagacggaccgggacgaggacggcgtcggggacgc
ctgcgacagttgtcccgaaatgagtaatcccactcagacagatatggacagcgatctggt
aggagacatctgtgacaccaacgaggacagcgatggggacgggcatcaggacaccaagga
caactgcgctgagatccccaacagctcccagctggactcggacaacgacgggctggggga
tgaatgtgacaacgacgatgacaatgatggcatccctgactacgtggcacccggcccgga
caactgccgcctcatccccaaccccaaccagaaggattcggatgggaacggtgtgggcga
tgtgtgcgaggaggacttcgacaacgacacggtggtggaccagctggacgtgtgccccga
gagcgccgaggtgacgctgaccgacttccgcgcctaccagaccgtcatcctcgatcccga
gggggatgcccagatcgatcccaactgggttgtcctcaaccagggcatggagatcgtgca
gaccatgaacagtgacccgggcttggctgttggctacacggccttcaacggggtggactt
tgagggcaccttccacgtcaacaccatcaccgacgatgactacgccggcttcatcttccg
ctacccgggcagacgccacacgggccccacgcccgaccacgtccgcctgctctggaagga
cccacgcaacgtgggctggagggacaagacgtcctaccgctggcagctgacacacaggcc
ccaggtgggctacatcaggtga
DBGET
integrated database retrieval system