Charadrius vociferus (killdeer): 104291521
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Entry
104291521 CDS
T08577
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104291521 (LRBA)
Membrane trafficking [BR:
cvf04131
]
Endosome - Lysosome transport
Others
Others
104291521 (LRBA)
Endosome - Golgi transport
104291521 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
104291521 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
SUKH_6
IspD
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
104291521
NCBI-ProteinID:
XP_009889063
LinkDB
All DBs
Position
Unknown
AA seq
2859 aa
AA seq
DB search
MASEGKQVVQPTGDDGGGGGGGGGGAGKEGNAAEGGSVLQPLNPGVPIRGIRMKFAVLTG
LVEVGEVSNRDIVDTVFNLLVGGQFDLEMNFIIQEGEGITCMVDLLDKCDVTCQAEVWSM
FTAILKKSIRNLQACTEVGLVEQVLKRIDRADNMIADLLVDMLGVLASYNLTVRELKLFF
SKLQGEKGRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTF
HTWLRMDPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFD
FKPQKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADA
NRVFCGQMTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKL
SSAIAFMYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGV
QVLFPLFAQLDYRQYSSDHVDTTVCSTLLTFIMELLKNSIAMQEQMLSCKGFLVIGYSLE
KSSKAHVTRAVLELCLAFSKYLSNLHNGVPLLKQLCDHVLLNPAIWIHIPAQVQLILYTY
LSTEFIGTVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGMDGPRPTQKEILS
LRAFLLMFIKQLVMKDYGVKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPGSMIP
AFDQRNGLQVVYKLLASRSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLM
LQTSLITMTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAILLRNSPQCP
ETLDVRRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTI
FRILLYHAIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYREYQGKGGEGSGIRSST
PIRTISGVSKEAETKGKQQYLELKEDAASPSHIIDDGLESSTEKKETNTSSDGDQQTHSV
SNHREELEREDREITTQDLKAVSHVEFSPEPEAIKPSVSEITTGIAEAIEDSLSKADELV
EETVAVTAASLAMQSTVEGETPESPERLEKSTVEVEDEDDFVDLKEESSMPLPSEEFAET
NEERSSNESEVTKQEEAIEKQPESVHLKSEGTESLDGKKQELTLPETESSAVQEGATQLD
SEGKKKLEEEKILSSETKTAKDNTNAHVSEPAGASDKRIAKLDVSSVASDTEKLELKANT
CLEAPLPPRSIPETTRQQGSSGQELAGTSDGQRRDSRSTVFRIPEFKWSLMHQRLLTDLL
FSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAAT
SATHELENIEATQGLSVEVSLTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGILRQC
LRLVCAVAVRNCLECQQHAQMKPIGDIGKNQKIVQGLTGKSAAKSPVDIVTGGISPIRDH
DRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRPPNH
SQSFKESENENNETSATDVGNPSAALGASASTEDSESTASVRRRDSGLGEEPASGHTNSS
GSVAETGPLDVSAGPDAISEVLCTLSLEVNKSQEGRTETGTEDTKPATSVPAAKNVNVKD
ILRSLVSTPADGTAVDAALLPPTFLGVLGDGAAEQPVQFHSFDRSVVVPPKKSTISSSTA
AVGIPPNAVSVVSSLDSAQALDLSGESPGRGSSNSKLPSVPTVSSVPEDSASNMSITDRL
EHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSSSVVELVMLLCSQEW
QNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDINRHAEFESLCA
QYSADKREEEKMCHHLIMAAKYRDQVTATQLIQKIINILTDKHGAWGSSAPSRPCEFWRL
DYWEDDLRRRRRFVRNPLGSTHPEATLKAAGEHAPDEDILVKGKQSIKSQVLGNQNSESE
ILLEGDDDIMSFMEEREVENLTGPAALSTPAQLVAPSVVVKGTLSITLSELYFEVDEEDP
SFKKIDPKILAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFMANRVGVMFNFPDQATV
KKVVNCLPRVGIGTIFGLPQTRRISLASPRQIFKASNMTQRWQHREISNFEYLMFLNTIA
GRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWED
DQVPKFHYGTHYSTASFALTWLLRIEPFTTLFLNLQGGKFDHADRTFSSVSRAWRNSQRD
TSDIKELIPEFYYLPEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALES
EFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLSSITDPVLREAVEAQIRS
FGQTPSQLLIEPHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQ
PGLATPAVITVTANRLFAVNKWHNLPGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLD
QSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDSGKLIQVVFGHWDVVTCLARSESYI
GGNCYILSGSRDATLLLWYWNGKTNIIGDNPRASDFATPRAILTGHDYEITCATICAELG
LVISGSKEGPCLIHSMNGDLLRTLEGPVTLEGPENHLRPKLIQASREGHCVIYYENGLFC
VFSVNGRLQATMETDDKIKAIQLSRDGQYLLTGGDNGVVMVWQMWDLKQLFAYPGCDAGI
RSMALSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8580 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaggcaaacaagttgttcagccaacaggtgatgatggaggaggaggtggt
ggaggaggaggaggagcgggaaaagaaggaaatgctgcggaagggggaagtgtgctgcag
cctttgaatccaggagtccccatccgaggcatcaggatgaaatttgctgtgctgacagga
ctggtggaagttggtgaagtgtccaacagagacatagtcgacactgtgtttaatctgctt
gttgggggccagtttgacttggaaatgaactttatcatccaagaaggagagggcatcacc
tgcatggttgacttgctggacaagtgtgatgtcacctgccaggctgaggtgtggagcatg
tttacagcaatcttgaagaaaagtatacgcaatctacaagcatgcacagaagtgggcctc
gtagaacaagtgctcaagaggattgatagagctgacaacatgattgcagatctcttagtg
gatatgctgggtgtgttggctagctataacttgacagttcgagagctaaagttattcttc
agcaagcttcaaggagaaaaagggagatggccaccacatgctgggaagttactgtctgtg
ttaaaacacatgcctcagaagtatggacctgatgccttcttcaactttccagggaaaagt
gctgcagctattgccttacctcctatagccaagtggccataccagaatgggtttactttc
cacacttggctaagaatggatcctgtaaataatataaatgtggataaggataagccttac
ttatattgttttcgaacaaacaaaggacttggttattctgctcactttgttggaggctgc
ttgattgtaacgtccataaaatcaaagggaaaaggattccagcattgtgtaaaatttgat
ttcaagccacaaaagtggtatatggttactatagtgcacatctataaccgctggaagaat
agtgaacttcgatgttatgtgaatggggagctggcatcttatggagaaataacatggttt
gtcaacaccagtgatacatttgacaaatgtttcctgggttcttcagaaacagcagatgcc
aatcgagtgttttgtgggcaaatgacatccgtttacctttttagtgaggctctcaatgct
gctcagatctttgccatttatcagcttggtctgggatataagggaacattcaagttcaag
gcagaaagtgatctcttccttgatgaacatcacaaattgttgctatatgatggcaaactg
tccagtgctattgcttttatgtacaatccaagggctacagatgcacagctgtgtctagag
tcatcccctaaggataacccttctatttttgttcattcaccacatgccctcatgctgcag
gatgtgaaggcagtcttaacgcattctatccaaagtgccctgcactccattggaggagtg
caggtacttttccctctttttgcacagttagactataggcaatattcatcggatcacgtt
gacacaactgtttgttctactttattgactttcatcatggagttgttgaagaactccatt
gctatgcaagaacagatgctttcctgtaagggcttccttgtgataggatatagcctagaa
aagtcttccaaagcccatgttacccgagctgtactagaactttgccttgccttttcgaaa
tacctgagcaatttacacaatggggtgcccttgctgaagcagctgtgtgatcatgttctc
cttaatccagcaatatggattcatatcccagcacaggttcagctgatcctgtacacttac
ctatctactgagttcattggcactgttaacatatacggtgcaatccgtcgggttgggaca
gttcttttggtcatgcataccttaaagtattattactgggtggtgaatcctcaggatcgc
agtggtataactcccaagggcatggacgggccacggcctactcaaaaagagattttatct
ctgcgagcattcttgttgatgttcattaaacagctagtgatgaaggactatggagtaaaa
gaagatgaattgcaggctatcctcaattatctgctcactatacatgaggatgacaatcta
atggatgtcttgcagttgcttgttgctctgatgtcagagcatcccggttctatgatccct
gcttttgatcagaggaatggattacaggttgtctacaagcttttagcatcacgaagtgaa
ggcatcagggtgcaagctctgaaagtgatggggtatttcttaaagcatcttgctccaaag
agaaaagctgaagtcatgcttggacatggattgttctctttgttggctgaaaggctgatg
cttcagacaagcttaatcaccatgaccacgtacaatgtcctatttgagattctgactgaa
cagatttgcactcaagtgatacataaacaacatcctgacccagattcaacagtgaagata
caaaatcctcagattttgaaggttattgcaatcctgctacgtaattctccacagtgtcca
gaaactctggacgttcggcgagcctttctctcagatatgattaaactttttaataatagc
agagaaaacaggaggagtttgttgcagtgctccgtttggcaggagtggatgctttccctt
tgctgttttaatccgaagacttctgaggaacagaagataaccgagatggtgtatactata
tttcgaattttactctaccatgcaatcaaatatgagtggggtggctggcgtgtttgggtg
gatacactgtcaatcacacattcaaaggtaacttttgaaatgcacaaagagagtctttct
caaatgtacagggagtaccaagggaaaggaggtgaagggagtggaatacgttcttcaact
ccaattagaacaatctctggagttagcaaagaagctgaaaccaagggaaagcaacaatac
ttggagttaaaagaagatgctgcttctccttcccacattattgatgatggtctggagagc
agcactgaaaaaaaagagacaaatacctcatcagatggtgaccaacaaactcattcagta
tctaatcatagggaggagttagagagggaagacagggagattactacgcaggatttaaaa
gcagtgtctcatgtggaattttctccagaaccagaagcaataaagcccagtgtttcagaa
attactactgggatagctgaagcaattgaagattctctgagcaaagctgacgagcttgtg
gaagaaacagtagcagtcactgctgcttctttagcaatgcagtctactgtggaaggagaa
actcctgaaagcccagaaagactggaaaaatcaacagtagaggtggaagatgaagatgac
ttcgttgatttgaaagaggaaagtagtatgcctttaccttcagaagagtttgcagaaaca
aacgaggaacgtagctctaatgaaagtgaagtgacaaagcaggaagaagcaatagagaag
caacctgaatctgtgcatttaaaatctgaaggtactgaaagtttggatgggaaaaaacaa
gaactgactttaccggaaacagagagttctgcagttcaagaaggagcaactcaactggac
tcagaaggaaaaaagaagctggaggaggaaaagattctttctagtgaaaccaaaacagct
aaagataatacaaatgcacatgtgtcagagcctgctggagcctctgataaaagaatcgcc
aaacttgatgtttctagtgtggcatcagatacagaaaaactggaactgaaagctaacacg
tgtctagaagcacctctgccccccagatccatacctgagaccacaaggcagcaaggttct
tcaggacaagagctagctggtacatcggatgggcagagaagagactctaggtcaactgtg
ttccgtattcctgagtttaagtggtcactgatgcatcagcgcttgctcacagacttactc
ttttccatagaaacagatatacaaatgtggagaagccattctacaaaaactgtgatggac
tttgtgaatagcagtgacaatgtcatatttgtgcacaacacaattcacctcatctctcaa
gtgatggacaacatgatcatggcatgtggtggtatattgccattgctttctgctgccaca
tccgctactcatgaattggagaatattgaggcaactcaaggactttctgtagaagtatct
ttaacgtttctccagagattaatcaaccttgtggatgtgctaatttttgcaagctctctt
ggtttcactgaaattgagtctgagaaaaatatgtcatctggaggaattctgcgacaatgt
cttcgtctggtatgcgcggtagcagtaagaaattgcttggagtgtcagcagcatgcacag
atgaagcctattggagacattgggaagaaccaaaaaatagtgcagggcttaacaggaaag
tctgcagcaaagagtccagtggacattgtgactggtggcatttctccaatacgagaccat
gacagacttctgcaggatatggatattaatcgacttcgagcagtagtgttcagagatata
gaggatagtaaacaggctcagtttttggctttggctgttgtgtattttatttctgtgctc
atggtttcgaaatacagagatatactggaaccccagaatgaaagacgaccaccaaaccat
agccagtcattcaaggaatcagagaatgaaaataatgaaacttctgctacagatgtggga
aacccatctgctgctcttggtgcttcagcctccactgaggattcagaaagtacagcatct
gtacgaagaagggattctggtcttggggaggaaccagcttcagggcatacaaacagttct
ggtagtgttgctgaaacaggacctctggatgtcagtgcaggtccagatgcaatcagtgaa
gtactatgcacactctcattagaagtaaataagtctcaggagggcagaactgagacagga
actgaggatactaagcctgcaacttctgtgccagctgcaaaaaatgtcaatgtaaaggac
atcctgagaagcttggtaagcacaccagctgatgggactgcagtggatgctgctcttctg
ccaccaaccttccttggagtccttggtgatggagctgctgagcagcctgtacagttccat
tcctttgacaggagtgttgttgtaccaccgaagaaatcaaccatttcctcttctacggct
gctgtgggtattcctccaaatgctgtcagtgtggtttcttctttagattcagcccaagcc
ctggatttgtcaggagaatctcctggaaggggatcatctaattcaaaattgccatccgtc
cctacagtttcttcagtgcctgaagattctgcttcaaatatgagtattacagacaggctt
gaacatgctttggaaaaagctgccccgcttctgagagagatttttgtggattttgctccc
tttctttctcggactcttttgggcagccatgggcaggagttgctgatagaaggtcttgtg
tgcatgaaatctagcagttcagttgtggaactggtgatgcttctttgctctcaggagtgg
cagaactctatacaaaagaatgctggccttgcctttattgagcttgtcaatgaaggaagg
ttgctgagtcaaaccatgaaggaccatttggtaagagtggcgaatgaagcagaatttatc
ttgagcagacagagagcagaggatattaaccgccatgctgaatttgagtcactgtgtgcc
cagtattctgcagacaaacgggaagaagaaaaaatgtgtcatcatttgataatggcagct
aagtaccgagaccaggtgactgcaactcaactaatacagaaaattatcaatattctgaca
gacaagcatggagcctggggaagctctgcaccaagtcgtccttgtgagttctggcgcctt
gactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaacccccttggatcg
acacatcctgaagcgacactaaaagcagccggagaacatgctcctgatgaggatatactt
gttaaaggaaagcagtccatcaagagtcaagttttaggaaatcagaactcggaaagtgag
attctcttggaaggcgacgacgatatcatgtctttcatggaggaaagagaagtggagaac
ttaacgggtccagctgccctaagcacaccagctcagcttgtggcaccctcggtagtagtg
aaaggcactctttccatcactctttctgagctctactttgaggtggatgaagaagatccc
agttttaagaaaatcgacccgaagattctggcatatacagaaggactccatggaaaatgg
ctcttttcagagattcgctctatcttttcccgacgttatcttttgcaaaatacggcactg
gagatattcatggcaaatagagtgggtgtcatgttcaactttcctgaccaagcaacagta
aagaaagtggttaactgtctaccacgggtcggtattggtaccatctttggactaccccag
accagacgcatttctttggctagtccacgacagattttcaaagcttccaatatgacccag
agatggcaacaccgggaaatttctaacttcgaatacctgatgtttctaaacactatagca
ggtcgaacttacaatgatttaaatcagtaccctgtcttcccttgggttatcaccaactat
gagtcagaggagttggaccttacacttcctagcaacttcagggatttgtcaaagcctatt
ggagctttgaacccaaagagagcagcgttctttgctgagagatatgaatcatgggaagat
gatcaggttccaaaatttcactacggcacacattattcaactgcaagttttgcactcaca
tggttattaagaattgaaccctttacaacacttttcttaaatctacaaggtgggaagttt
gatcacgcagatagaacattttcatctgtttcaagagcgtggcgcaatagtcagcgtgac
acttctgatatcaaggaattgattcctgaattctattacctcccagagatatttgtcaac
agcaacaattacaatctgggagtgatggatgatggaacagttgtgtctgatgttgaactt
ccaccatgggccaaaaccccagaagaatttgttcgcataaacagactggcattagaaagt
gagtttgtttcctgccagcttcaccagtggattgatctgatttttggctacaaacagcaa
gggccagaggctgttcggtccctgaatgtattctactatttgacttatgaaggagctgtt
aatttaagttcaataaccgatccggtattgagagaggctgttgaagctcaaatacgaagt
tttggacagaccccttcccaactgctcatagaaccacatcctccaagaagttctgccatg
caggtgtatctcctcctgcagagtccgttgatgttcacagaccaagctcaacaggatgtt
atcatggttctaaagttcccatccaactcccctgtcactcatgtagcagccaacacccag
cctggtctggccactcctgctgtgatcacagttactgcaaacaggctatttgctgtaaac
aagtggcataatcttcctggtgctgtacaagaccagccttaccagctgccagtggaaatc
gatcctctcatagctagcaacacaggtatgcacaggaggcaaatcactgaccttttagac
caaagcattcaggtacattcccagtgttttgtcatcacctctgataatcgttacatcttg
gtctgtggcttctgggacaagagtttccgagtttattctaccgactcaggtaaactgata
caagtagtatttggacactgggatgttgtaacctgtcttgctcgttctgagtcctatatt
ggaggaaattgttacattctctcaggatcgcgtgatgcaacattgctgctctggtactgg
aatggcaaaaccaatatcattggtgataacccaagagccagtgatttcgcaactcctcga
gctattttgacaggacatgactatgagatcacctgtgctaccatttgtgctgaacttggc
ctggtaataagtggttccaaagaaggaccatgtctcatacattctatgaatggagatcta
ctgaggacgttagaaggtcctgtaacattagaaggtcctgaaaaccacctgagaccaaaa
cttattcaagcttcaagagaaggccactgtgtcatatattatgaaaacggcctcttctgt
gtattcagtgtgaatgggagacttcaagccacgatggaaacagatgacaagataaaggca
attcagctgagtcgagatggacaatatctgcttacaggtggagacaatggagttgtcatg
gtctggcagatgtgggacctcaaacaactttttgcttaccctgggtgcgatgctggaatc
cgatccatggccctgtcgtatgaccaaaggtgcataatgactggcatggcatctgggagc
atagtggttttctacaatgatttcaaccgttggcaccacgagtatcaaaccagatactga
DBGET
integrated database retrieval system
