Charadrius vociferus (killdeer): 104291550
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Entry
104291550 CDS
T08577
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104291550 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104291550 (NFRKB)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
104291550 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
104291550
NCBI-ProteinID:
XP_009889099
LinkDB
All DBs
Position
Unknown
AA seq
1326 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGEGNGTHGIMEDCMLGTTRVSLPEDLLEDPEIFFEVVSLSTWQ
EVLTDAQQDHLKKFLPHFPENNREHQNKLISALFSGENFRFGNPLHIAQKLFRDGHFNPE
VVKYRQLCFKSQYKRYLSSQQQYFYRLLKQILASRNHLLDLARKGGPDMTLRRKHLSPTY
DAEERDRRTHRRYLKILREVKEECGDTTLSSDEEGNALDRTKDSRCEWRKTNFEYLSSWP
PSSPARCPSPPVPLRVIPTLSTLDMKTADKIELGESDLKMMLKKHHEKRKRQPDHPDLVT
TDLTLEDIMTRVNAGRKGSLAALFDLATLKKKVKEKEDKKKKKLKIIKSEVEDLADSLSN
ADGIPSMSQDPSPIPLSSVKEEPLEDMKPCLGINEISSSFFFLLLEILFLEGPATLSVLE
DKILDWQSSPASALNNWFSFASNWSELVLPALQYLTGDSRDVPSSFSPFVEFKEKTQQWK
LLGSCQDHEKELAALFQLWLETKDQTFFKENEDSSDATPPIPRVRTDYVVRPSTGEEKRV
FQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTIL
SLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKY
DIGRKLWIYLHRDRSEEEFERIHQAQAAAAKAKKALQQKPKPPAKVKSSSKESSVKALPS
STSEPSQLSLSDSSMPPTPVTPVTPTAPALPATPISPPPVSVVSKSAGSEPAKPSQSVLL
VSSPTMPQLGTLLSTAQSSQTQPGPQPPPTRVVSHTTSSGLPQVRVVTAQSSLPAVSQQA
PVVTQQQQPTSVPQIRVPATATQTKVLPQAVMTLPVKAQTSPVQVQRPGSSVTGQTGITV
TGLSAAPSPAVKPVTSSPGSSATSTSSTTVIQNVAGQNIIKQVAITGQLGMKTQPGSGIP
LTATNFRIPGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAA
GSSASGKGISATLHVTSNPVQTADSPAKTSTATSASSSPAGSTVVKVTPDLKTAEPTSSA
FRLMPALGMTVADQKSKAITTVASTEAKPAATIRIVQGLGVMPPKAGQTITVATHAKQVP
SSSAVSVPGTVHTSAVSLPTMSATVSKAVAVASGAAGTPITIGTGATAVRQVPVSTTVVS
TSQAGKLPARITVPLSVISQPVKGKSVVTAPIIKGNLGANISGLGRNIILTTMPAGTKLI
AGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTVSGSTKAVSTVVVTTAPSPK
QTQDQL
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atggactctctggatcacatgctgacggaccccctggagctgggaccctgcggggaagga
aatggcacacatggcatcatggaggactgcatgctgggtaccaccagggttagtctgcct
gaggacctgctggaggaccctgagatcttctttgaagttgtcagcttgtctacgtggcag
gaggtgctgacagatgcgcagcaagaccacctaaaaaaattcctgcctcactttcctgaa
aacaaccgagagcatcagaacaaactcatctctgcattgttcagtggtgaaaacttccgt
tttggaaatccactgcatatcgcccagaaactcttccgggatggacactttaatcctgaa
gttgtgaaataccggcagctctgttttaagtcgcagtacaaacgctacctgagctctcag
cagcagtacttctaccgactgctcaagcagatcctcgcttcccgcaatcacttgctggat
ttagctcggaaaggaggccctgatatgaccctcaggagaaagcacttgtcaccgacgtat
gatgcagaagaacgagaccgacggacacatcggcgctacttgaagattctgagggaagtg
aaagaggagtgtggagataccaccttgtcttctgacgaagaaggtaatgccctggaccga
actaaagactcgagatgtgaatggagaaagacaaattttgaatatctaagctcatggcct
cccagttctccagcacgttgtccaagtccaccagttcccctgagagtgatcccaacattg
tcaaccttggacatgaaaacagcagacaagatagaacttggggaaagtgatttgaagatg
atgttgaagaagcaccatgagaaacgaaaacgtcaacctgaccaccctgatctagtcacg
acagatctgactcttgaggacatcatgactcgagtaaatgccggcaggaaaggttcctta
gcagctttatttgaccttgcaaccctcaagaaaaaggtgaaggaaaaagaagataagaag
aaaaaaaagctgaagattattaaatccgaggtggaagatttggctgactcccttagcaat
gcagatggaatcccatcaatgtctcaggatccttcccccatccctctgtcatctgtcaaa
gaggaacctcttgaagacatgaagccatgccttggaataaatgaaatatcttccagtttc
tttttccttcttttggagatcctgttcctggaaggacctgctactctctctgtgcttgaa
gataaaattctagattggcaatcttctcctgccagtgcactaaataactggttctccttt
gcttctaactggtctgaactggttttacccgccttgcagtacttgacaggtgacagcaga
gatgttccttccagcttctcaccttttgttgaattcaaggaaaaaactcagcagtggaaa
ttgcttggttcttgccaagatcatgagaaggaattggcagcgctgtttcagctctggttg
gagaccaaagaccagacttttttcaaagaaaatgaagacagctcagatgccacaccacca
attcccagagtaaggactgactatgtagtccgacctagcactggagaggagaaacgtgtg
tttcaggagcaggaacgttaccgttacagccagccacacaaagctttcactttccgtatg
catggctttgagtcagttgttggtcccgtgaagggggtgtttgacaaggaaacctcgtta
aacaaagcccgagagcattctctcctacgctcagacagaccagcttatgtcaccatcttg
tccctcgttcgtgatgctgccgctcgccttcctaatggagaaggaactcgtgctgaaatc
tgtgagctgcttaaagattcccagttcctagctcctgatgtcacaagcgctcaagttaat
actgttgttagtggtgctctggatcgattacattatgagaaagatccctgtgtgaaatat
gacattggacgcaagctgtggatctacctgcaccgggacaggagtgaggaagagtttgaa
cggatccaccaggctcaagctgctgcagcaaaggccaagaaagctcttcagcagaagcca
aagcctccagctaaagtgaagtctagtagcaaggagagttccgtgaaagcactccccagc
agcacatcagagcccagtcagctgagccttagtgactccagcatgccaccaactcccgtg
actcccgtgacgccaactgcaccagcattaccagcaacgcctatttcacccccaccagtg
tctgtggttagcaagagtgctggatcggagccagcaaaacccagccaaagtgttcttctg
gtgtcgtcccctaccatgccacagctcgggacgttgctttccacagcccagagttcacag
acacagccggggccgcagccgcctcccacgcgggtggtaagtcataccacctcctccgga
ctgccgcaggtccgggtggtcactgcccagtccagcctcccagctgtgtctcagcaagcc
ccggtggtaacccagcagcagcaacctacgtcagtgcctcaaatccgcgttccagctaca
gccacgcaaaccaaagtgcttccccaggctgtgatgactctgccggtaaaagctcaaacc
agcccagtgcaggtgcaaagaccaggaagctctgtgacaggacagacgggcatcactgtg
acaggactctctgcagcgcccagtcccgctgtaaagccagtaaccagctctccaggcagt
tctgctacaagcacctcctctaccactgtcatccagaatgtagctggccagaatatcatc
aagcaggtggctattacagggcaacttggcatgaagacccagcctggaagtggcatccca
ctcacagcgaccaattttcggatcccaggaaaggatgtgttgcgcctacccccgtcctct
atcaccacagatgcgaagggacagactgtgctgcgtatcaccccggacatgatggccacc
ctggccaaatcacaagtcactactgtcaaactgactcaggacctcttcacagcagctgcg
ggaagcagtgctagtgggaaaggcatctctgcaactttgcacgtgacatccaatcctgtc
cagactgctgattctccagccaagactagcacggccacttctgcctcgtccagcccagct
ggaagcacagtggttaaagtgactcctgacttaaagactgcagagccaacaagctccgct
ttccgactgatgcctgctctgggcatgactgtggcagatcagaagagcaaagccataact
acggtggcatccaccgaggccaagccggctgctactataagaatcgtgcaggggctgggg
gtgatgccgcccaaagctgggcagactataactgtagctactcatgctaagcaagtgccc
tcttcctcagcagtgagcgtgcccggcacagtccatacctcagctgtctctttaccaacc
atgagcgccaccgtgtcgaaagcagttgctgtggcctcgggagctgctgggactcccata
actataggcacaggagccactgctgtgcggcaggtacccgtcagcaccacagtagtatct
acatcccaggcaggtaaactaccagcacgaataacagtgcctctgtcagtgatcagccag
ccagtgaaaggcaagagtgtggtgactgcccccatcatcaagggcaaccttggggccaac
atcagtgggttaggtagaaatatcatcctgactacgatgccggcagggacaaaactgatc
gctgggaacaagccagtgagttttctgactgcacagcaactacagcagctgcaacagcaa
ggccaggccacgcaggttcgaattcaaactgtgccagcctcccatctccagcagggaaca
gtgtctggctctactaaagcagtttccactgtggttgtgacaacagctccatctccaaag
cagacccaagatcagctatga
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