Charadrius vociferus (killdeer): 104291855
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Entry
104291855 CDS
T08577
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvf03016
]
104291855 (TARBP1)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104291855 (TARBP1)
Enzymes [BR:
cvf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
104291855 (TARBP1)
Transfer RNA biogenesis [BR:
cvf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104291855 (TARBP1)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104291855 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
Cut8
Motif
Other DBs
NCBI-GeneID:
104291855
NCBI-ProteinID:
XP_009889452
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
METLEGNQIHVIKPVLPKLNSLYEHALSGEKGCWLFHPSWHMCIYKRMFESENKTLMKEG
ILHFLELYETKHPPNSRGFSEFVIGPLMDALSESSLYSRTPGQLMGACPPLGMRLQKFLA
TYLMLLPEEEKGSFLLKFIQKMTSRHWCAVPILFLSMALAYIPACKVLGAEGLHALRDVL
QCTMITHQILLRGAAQCYLLQTAMHLTDVEKVSLPEISSFLLSLRPEESLRRDTTLWMEL
CRWFQVNDRCFRKSVTSDFEHQETSSLCQYVRSLVGEYLKTPAAERENCFMPDWFEAKLV
ATMILLAADVEQMRNKYSGKSNIEWIELEAFLNPLLDVLMKLGSNAYIPTLKTDKSLQLL
LKLLQTRSLKCSNTQDDGVLFFIWKALVTPVESILEFVLRRLTTNDLSTVGDLDRCDLYL
ALIPEIMNLCLQVSWKKVPSIKNFILSLTNASIRNLQERNCEEEPKLKEQIKKVVSMASL
TAICEIMDGKPEAHLESLPSVDALKRFISFSQYNEVLKKPSYIEEKSSLCEETTSQGWGK
IVARYIHDQWICLRFILNSFPTLVQEHEETSEMSLSTVERSRKILESALEALTILPSDQV
LPVFNCMKLLVPKLLASAESLCIEAFDLTWKIISSLSNTQLIFWSNLKAFVQFVFDAEVL
AVAASAKGQAYAKIKEIILKLIDMSTTKTGVFNVVLSHCCRSWMFPTVDDRSALTNAFLN
AGNYCELITEACVFGTVFRRDQRLIQDVHAFIENLGEKCAANVVTESTNRDDHYVRICAI
KFLCLLDGSNTLHKKFIEDIFIKLLDKDELVSRSRTRYYANSLQHRIKNRVWQTLLVLLP
KLDQNFLGGILGKIFQAGFGNNQASVKYFIEWIVILSLHKYPQFLNKFWDCFCYDEEKLK
TSICTFLSVLSHFDIVLQNTLEKKPALKKALIVVLQWCFNHNFSVRLYALVALKKIWGMC
RMLHVEEFEALTPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFHPLEDYSLETIFY
TLPRLSELAEDEWISIAKFDRFTDVDLPPAFQWYHSRKELCDLKPSDWSQQDMGSNSVET
DSQTEWTDVQKKIIPWKNSTPSLDPEMVFQDRAAKLGKSNSRLIVVASLIDKPTNLGGLC
RTSEIFGASALVIGSLHYIQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYTII
GVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHVSG
ALLIWEYTRQQVIKQKQQK
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttggaagggaaccagatccatgtcataaagccagtattaccaaaactaaac
agtttatatgagcatgctttatcaggggaaaaaggttgttggttgtttcacccatcatgg
cacatgtgtatctataaacgaatgtttgagagtgagaataaaacattgatgaaggaaggc
attcttcattttctggagctttatgaaacaaagcatcctccaaattcacgtggtttttcg
gagtttgttatcggaccgttaatggatgccctttcagaaagttccctctatagcaggaca
ccaggtcagttgatgggagcctgtcctcctttgggaatgaggctacagaagtttttggct
acttatctcatgcttcttccagaggaagaaaaaggtagtttcctgttaaaatttattcag
aagatgacaagtaggcattggtgtgctgttcccattttgtttctttctatggctctggca
tatatccctgcgtgtaaagtgctgggtgctgaaggacttcatgctttaagagatgtcctc
cagtgtactatgattacacatcagattttgttgcgtggagctgctcagtgctatcttctt
caaacagctatgcatttgacagatgtggagaaagtatccctcccagaaatttcaagcttt
cttctgtcccttcgaccagaagagtccctaaggagagatactacgttatggatggagctt
tgcaggtggtttcaagtgaatgacagatgcttcagaaagtctgtaacctctgattttgaa
catcaagagacatcatcattatgtcagtatgtacgcagtcttgtgggagagtaccttaag
acaccagcagctgaaagagaaaattgctttatgcctgactggtttgaagctaagcttgtc
gcaacaatgattctgttggctgcagacgtggagcaaatgaggaataagtacagtggaaaa
agcaacatagaatggattgaactagaggctttcttgaaccctcttctggatgtcttgatg
aaacttggcagtaatgcttacataccaacactgaaaacagataaaagcctacagcttctc
ttgaagttattgcagacccgttcgttaaaatgttccaatacgcaagatgatggggtattg
ttttttatctggaaagctctagtgacacctgtggagagtattcttgaatttgttcttcga
cggcttactacaaatgacttaagcactgttggcgatctggatcgttgtgatctataccta
gctttaattccagagataatgaatttgtgcttgcaagtcagctggaagaaagtaccatct
atcaagaatttcattttgtccctgacaaatgcatctattcgtaatctccaggagagaaat
tgtgaagaggagccgaagcttaaagaacagattaaaaaagtagttagcatggcttcactt
acagcaatttgtgagataatggatggaaaacctgaagcacaccttgaatctctgccttct
gtcgatgctctgaaaagatttatttccttttctcaatacaatgaagtattaaagaagcca
tcttatattgaagagaaaagtagcttatgtgaagaaacaacatctcaaggatgggggaaa
attgttgcacgctatattcatgaccagtggatttgccttcgttttattttaaattcattt
ccaacactcgtccaagagcatgaagaaacttcagaaatgtcattatctacagttgaaagg
tcaagaaaaattctagagtctgcattagaagccctaactattcttccttcagaccaagtt
ttacctgtcttcaactgcatgaaactccttgttcccaagcttctggcctcagcggagtct
ctctgcatagaagcatttgatttgacttggaaaattatatcctctttgagcaacacacag
ctaatattttggtccaatctaaaagcttttgttcagttcgtctttgatgctgaggttcta
gctgttgctgcaagtgcaaagggtcaagcgtatgccaaaataaaagagataattctcaag
ctcatagatatgtccactacaaagactggagtttttaatgtagtccttagtcattgttgt
cgatcttggatgtttcccactgttgatgacagaagtgccttgacaaacgctttcttaaat
gctggaaattactgtgaacttatcactgaggcttgtgtctttggaactgtatttaggaga
gatcaaagacttattcaggatgtgcatgccttcatagaaaatcttggagaaaaatgtgca
gcaaatgttgtaacagaaagtacaaatcgagatgatcactacgttcggatttgtgctatc
aaatttctgtgcttgttggatggatcgaatacattgcataagaagtttattgaagacatt
tttatcaaactgcttgataaagatgaactggtatccagatctagaacacgctattatgca
aactccttacagcatagaattaaaaaccgggtatggcagactcttttagttcttcttccg
aaacttgaccagaattttttgggtggaatccttggcaaaattttccaggctggatttggt
aacaaccaggcatctgtgaaatacttcatagaatggattgttatcttgagtctacataaa
tacccccaatttcttaataaattctgggattgcttttgctatgatgaagaaaagcttaaa
acaagcatctgcacgtttttatcagtgttatcacactttgacatcgttcttcaaaatacc
ttagagaagaagccagctttgaagaaagccctcatagttgttctacagtggtgtttcaac
cataatttcagcgttcgactttacgcattagttgcccttaaaaaaatctggggtatgtgc
agaatgttgcatgtggaagaatttgaagctctgacaccagttattgaatctagccttcaa
caagtggaaaacatgcatggcacagggaatgctcgaaggaactggcaacgaatccaagac
catttcttctttgcaacatttcatccacttgaggattatagtctagagacaatattttac
actcttccccgcctttcggaacttgctgaagatgaatggatctcaattgctaaatttgac
agattcactgatgttgatttgcccccagcatttcagtggtatcattctcgaaaggaactt
tgtgatctgaaaccaagtgactggtctcagcaagacatgggttcaaattcagttgaaaca
gatagccagacagaatggactgatgttcagaaaaagattataccctggaagaacagtact
cctagtttagacccggaaatggtatttcaggatcgtgctgctaaactcggtaaatcgaac
agcagactgattgtggtggcttcgcttattgataaacctaccaatttaggaggtttatgt
cgtacaagtgagatatttggggcatctgcattagttattggcagtcttcattatatacag
gataagcagtttcagcatcttagtgtttccgcagagcagtggctcccccttgttgaggtg
aaaccatctcagcttgttgattatttacagcagaaaaaaacggaaggctacactattatt
ggtgtggagcagacagctaaaagttttgatcttacagaatattgtttcccagagaagtca
ctattattgctgggaaatgaacatgaaggaatcccagcaaacctgattcaccacctggat
gtctgtgtggaaattcctcagcagggtattattcgatcactcaatgttcatgttagtgga
gctctgctgatttgggagtacacaaggcaacaagtgatcaagcaaaaacaacaaaaataa
DBGET
integrated database retrieval system
