Charadrius vociferus (killdeer): 104291916
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Entry
104291916 CDS
T08577
Symbol
HIF1A
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04137
Mitophagy - animal
cvf04140
Autophagy - animal
cvf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104291916 (HIF1A)
04137 Mitophagy - animal
104291916 (HIF1A)
04148 Efferocytosis
104291916 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvf03000
]
104291916 (HIF1A)
Transcription factors [BR:
cvf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104291916 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
104291916
NCBI-ProteinID:
XP_009889518
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MPEKSKPLIFFPLKSAEGLLVVIDGEVFGSQDLMHAEPVMGRPRFAGDPRALQREAVPHA
ALTEDVRVCRQRPGPARPGPAPPPRAAQTTEPFGDRERSHAPNTNTPLPPSPVPPYAAAR
SREAGAEAGPTPYRRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKA
SIMRLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVN
KCMGLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTS
RGRTVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPL
DSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTK
GQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQT
ECMLKPVESPDMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNE
SDEQQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLE
PNTEPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKL
FAIDTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSGSQNAATITIF
QQTQTPSSTAEEIKPVTERVDDVKTLIVPSSPVHIINETSSAPASPYSGNRSRTASPIRA
GKGTLDQTEKSSPGAPSLLTVTLNKRSTAVDEELNPKMLALHNAQRKRKMEHDGSLFQAV
GIGSLFQQTGDRGGNASLAWKRVKGCKTNGVEQKTIILLXTDIASKLLGQSMDESGLPQL
TSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagaaaagtaagcccctgatcttcttcccgctgaagtcagcagaaggtttgcta
gttgttattgatggggaagtgtttgggtcccaagacttaatgcatgcagagcccgtcatg
ggccggccaaggtttgcaggagaccccagagccctccagcgggaagcggtgccccacgcc
gccctcacagaggacgttcgggtctgtcggcagcggcccggcccggcccggcccggccca
gccccaccgccccgggccgcccagacaacggaaccttttggggacagagagcggagccat
gcaccgaacaccaacacacccctaccaccatcaccagtccccccgtacgctgctgcccgc
tcccgggaggcgggagccgaggccgggcccacgccgtaccggcggattagctcagaacgc
agaaaagagaaatcaagagatgcagcccggtgccgaaggagcaaggaatcagaagtattc
tatgagcttgctcatcagctgcccctgccccataccgtgagcgcgcacttggacaaggca
tcaattatgagactgaccatcagctatttgcgtatgagaaagctgctagatgctggtgag
ctggagacagaagccaaaatggagaaggaactgaactgtttctacttgaaagctctcgat
ggatttgttatggttctgtccgaagatggggacatgatttacatgtctgaaaacgtgaac
aagtgtatgggactcactcagtttgagttgacggggcacagtgtatttgatttcactcat
ccatgtgaccatgaagagctgcgagaaatgcttacacacagaaatggtcctgtgaaaaag
ggcaaagagcaaaacacggagcgcagcttttttctcagaatgaagtgtacactgactagc
aggggaagaacagtgaatataaagtctgctacgtggaaggtactccactgcactggacac
attcgtgtatatgacacatgcggtaatcaaactcactgtggctacaaaaagcctcccatg
acgtgtctcgtgttgatctgtgaacctattcctcatccatcaaacattgaggtccctttg
gacagtaaaacgttcctcagtcgtcacagtcttgatatgaaattttcctattgtgatgaa
agaattacagagttgatggggtatgagccagaggaactcctgggtcgctcaatctatgag
tactatcatgctctggattctgatcatctgaccaaaacacaccacgacatgttcacaaaa
gggcaggtgacaacaggacagtaccgaatgcttgctaaacaaggtggctatgtctgggtt
gaaactcaagcaactgttatatacaacactaagaattctcagccacagtgcatagtgtgc
gtaaactatgtgttgagtggaattgttcagaaggacttgattttttcccttggacaaact
gagtgtatgctgaaaccagtggaatctcctgatatgaaaatgaccaaaatattcagtaaa
gatgacctggatgataccaacagcctatttgaaaaacttaaacaggaaccagatgcttta
actgtgctggccccagcagctggagacacaattatctctctagatttcagcagtaatgag
tctgatgaacaacaatgtgatgaagttcctttgtataatgatgtaatgctcccctcatcc
agtgagaaattgcagaatataaatatggcaatgtccccactgcctgcctctgaaactaca
aagccacttcgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggag
ccaaacacagagccgcttgaactttcttttaccatgcctcaggtgcaagagcaaccaacc
agcccttctgatgcaagcaccagccaaagttcacctgagcccagtagtcccaacgactac
tgctttgatgtggataatgatatggctaatgaattcaaactggaattagtggagaaactt
tttgcgatagatacagaagcaaaaaatccattctctactcaggaaactgatttagatttg
gagatgttggctccttacatcccaatggatgatgacttccagttgcgatcctttgatcag
ctatctccgctggaaagcagttcttccggctctcaaaatgcagccaccattaccatattt
cagcagactcagacaccatcaagtactgctgaagaaataaaaccagtgacagaacgtgtg
gatgacgtgaagacgctaattgttccttcatctcctgtccacataatcaatgaaacaagt
agtgccccagcatcaccttatagtgggaacaggagtcgaactgcgtctccaatcagagca
ggaaaaggaacattggatcagacggaaaaatctagtccgggagcgcccagtttgctaaca
gtcactctgaataaaagatctactgcagtggatgaagaactaaatccaaagatgctagct
ttgcataatgctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagtt
ggaattgggtctttattccagcagacaggtgaccgtggaggaaatgcatcacttgcttgg
aaacgtgtaaagggatgcaaaacaaatggagtggagcaaaagacaatcattctactatga
actgacatagcaagtaaacttctagggcagtcgatggatgaaagtggactaccccaactc
acgagttacgattgtgaagtaaatgctcccatacaaggcaacagaaacctgctacagggt
gaagaactgctcagagctctggatcaagttaactga
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