Charadrius vociferus (killdeer): 104291929
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Entry
104291929 CDS
T08577
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104291929
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvf04812
]
104291929
Cytoskeleton proteins [BR:
cvf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104291929
Intermediate filaments
Intermediate filament-binding proteins
104291929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SLATT_6
Motif
Other DBs
NCBI-GeneID:
104291929
NCBI-ProteinID:
XP_009889534
LinkDB
All DBs
Position
Unknown
AA seq
1554 aa
AA seq
DB search
CQLGGAPPDTGAATPRLPLGLIWTIILRFQIQVIKIKTEDNRETRSAKDALLLWCQMKTA
GYPEVNIQNFTTSWRDGLAFNALIHKHRFAGGWGEKMGDVNMEDPDEKSIITYVVSFYHY
FSKMKALAVEGKRIGKVLDQAMEIEAIIQRYEALAAELLAWIHHTVALIGNQKFANSLTG
VQQQLQAFTAFCTLEKPVKFQEKGNLEVLLFTIQSKLRATNRKLYVPSEGKSISDINKAW
TCLEKAEHEREVALRNELIRQEKLELLAQRFDHKAVMRETWLNENQRLVSQDNFGYDLPA
VEAAMKKHEAIEADISSYQERIQVVVELALEMESEGYYDTKRISAQKDNILRQWGLLTEL
VCARRARLEQNLALQKIFQEMVYMIDWMEEMQVLLLSKDLGKHLLEVEDLLQKHGLLEAD
ISAQTERVQALNAAALKFSELEGYQPCDPQIICNRVNHVQTCLEELGELASKRRKELEDS
RQLWAFFQEMEEAEAWIREKEQILAAKTWPSAGAAILAAKTCGRDLSSVLTLTNKHKSML
GELGSRRALLHQTMKRGEQILAKKRFSPGGIQEKMREVRLRWKKLEEVTGLHQQRLQEAL
NFFQFSAETDDLVAWLQDTYRIVSSDDFGHDDYSTQALLRKHRAVVEEVEKHRAAVLALR
KQLALLAPEHRQGVDVQIRVVEVEQLYGEVAEVAVLRQQWLQDALAVYRMFSEVHACEVW
VDEKEQWLERMEVPEELDEVEVVQHRFESLDQEMNSVMGRILDVNQVVQQLVDGGHPSSE
EVRSCQDHLNSRWNRVVELVERKKGQLSSVLKIQNYLLECSEMKAQVREKRKAIEATQAG
GGDLGGVLALQRRLSTMEAALVVLEPRLVELQREGEALAASHPGRALEILLPFEQISEEW
EALKRALQGCEDSLTIAGRLQEFIQDLDNFLGWLVKTQAAVASQELPDNLSQAERLLNQH
AALKEEINGYEEDYAKIQAASDLLALEETEVPYLSLQQWLQKLDAGWGKLLQSWETRREA
LVQSHVFHLFLRDVQQCQTSLYNQEGEELLLAKPELTGAVRRQLEELRQCWVELETTSQA
RSRRPLKERRRILLASKEVHQVSHELEDEVLWVQDRLPLATLKDHGTNLQTVQQYIKKNQ
NLRREIQVHRPRIDEVLERAGAVATIKSPEAEGVRRLLERLGTMWGELQEQAERRQQTLD
ATYQLEQYYFDVAEVESWLGEQELLLMSEEKGKDEQSTLQLLKKHLLTEQTVENYEETIA
QLSRQCRALLELGHPQSEQVSRRQSQVDRLYVSLKDLVEERKAKLEQQYWLYQLNREVDE
LEHWIAEKEVVAGSPELGQDFEHVTIRFVGAVRDLLAWMDGVLCQMGAGEKPRDVSSVEL
LMNDHQGLKSEIEARGKSIAACLELGKTLILSKSPAAGEIKVHVEKLLAKKKEMMEKWDK
HWEWLQQSESHLGGVVVGTSDDGTSSPSSPSPVRCKATLADIVEQLQEKEAGGTLPASWV
NLYCVLSKGDLGFYKDAKGQAAGSTHGGEPLLNLHHSTSEVASDYKKKKNVFKL
NT seq
4666 nt
NT seq
+upstream
nt +downstream
nt
cttgccaactgggtggggcccccccggacaccggggccgccaccccccgcctccccctcg
gcctcatctggaccatcatcctccgcttccagatccaggtgatcaaaatcaagacggaag
acaaccgggagacgcgctcggccaaggacgctctcctcctctggtgccagatgaagacgg
cgggctaccccgaggtgaacatccagaacttcaccaccagttggagggacgggttggcct
tcaacgccctcatccacaagcacaggttcgccggggggtggggggagaagatgggggacg
tcaacatggaggaccccgacgagaagtccatcatcacctacgtggtgtccttctaccact
acttctccaagatgaaggcgctggctgtggaggggaagcgcatcgggaaggttctggacc
aggccatggagatcgaggccatcatccagcggtacgaggcgctggcggccgagctgctgg
cctggatccaccacaccgtcgccctcatcggcaaccagaagttcgccaactccctgacgg
gcgtccagcagcagctccaggccttcaccgccttctgcaccttggagaaacccgtcaagt
tccaagagaagggcaacctggaggtcctcctcttcaccatccagagcaagctacgggcca
ccaaccgcaagctctacgtccccagcgagggcaagagcatctccgacatcaataaggctt
ggacctgtttggagaaggcggagcacgagcgggaggtggcgttgcgcaacgagctgatcc
ggcaggagaagttggagctgttggcccaacgtttcgaccacaaggccgtcatgagggaga
cgtggctgaacgagaaccaacgcttggtctcgcaggacaactttggctacgacctgccag
cggtggaggccgccatgaagaagcacgaggccatcgaggccgacatctcctcctaccaag
agcgcatccaggtggtggtggagctggccctggagatggagtccgagggctactacgaca
ccaaacgcatcagcgcccagaaggacaacatccttcggcagtgggggctgttgaccgaac
tggtctgcgcccgccgggcccgtctggagcagaacctggccctccagaagatcttccagg
agatggtctacatgattgactggatggaggagatgcaggtgctgctgctctccaaggatt
tggggaaacatcttctggaggttgaggacctgctgcagaagcacgggctgctggaggccg
acatctccgcccaaacggagcgggtgcaggcgctcaacgccgccgcgctcaagttctccg
agctggagggttaccaaccctgcgacccccagatcatctgcaaccgggtcaaccacgtcc
agacgtgcctggaggaactgggagaactggccagcaagaggcgcaaggagctggaggact
cccgccagctttgggccttcttccaggagatggaggaggccgaggcctggatccgcgaga
aggagcagatcctggcggccaagacgtggccttccgcaggtgctgctatcctggcggcca
agacgtgtggccgggacctgagcagcgtcttgaccttgaccaacaaacacaagagcatgt
tgggcgaactgggcagccgccgggcgctgttgcaccagaccatgaagaggggcgagcaga
tcttggccaagaaacgcttcagccccggcggcatccaggagaagatgcgggaggtccgcc
tccgctggaagaagctggaggaggtgacggggttacaccaacagcggttgcaggaggccc
tcaacttcttccagttcagcgccgagacggacgacttggtggcctggttgcaggacacct
accgcatcgtctccagcgacgactttggccacgacgactattccacccaagctcttctac
ggaagcaccgggcggtggtggaagaggtggagaagcaccgggcggccgtgttggccctcc
ggaagcagttggctcttctggcgcccgaacaccgtcaaggggtggacgtgcagatccggg
tggtggaggtggagcagctctacggggaggtggccgaggtggccgtgttgcggcagcagt
ggttgcaggacgctttggccgtctaccggatgttcagcgaggtgcacgcctgcgaggtgt
gggtggacgagaaggagcagtggttggagaggatggaggtgccggaggagctggatgagg
tggaggtggtccagcataggttcgagagtttggaccaggagatgaacagcgtcatgggac
ggatcttggatgtcaaccaggtggtgcagcagttggtggacggggggcaccccagctcgg
aggaggtccgctcctgccaggaccacctcaacagcaggtggaaccgggtggtggaactgg
tggagcgcaagaagggtcaactcagctccgtcctgaagatccagaactacctgctggagt
gcagcgagatgaaggcgcaggtgcgggagaagcgcaaagccatcgaagccacccaagcgg
gcggcggcgacctggggggagtgttggctttgcaacgccgcctctccaccatggaggcgg
ctctggtggttttggaacctcggttggtggagctgcaacgggaaggcgaagccttggccg
cctcccacccggggagagccctggagatcctgctgcccttcgagcagatcagcgaggagt
gggaggccctcaagagggcgttgcaaggttgcgaggactccttgaccatcgccgggcgct
tgcaagagttcatccaagatctggacaacttcttgggttggttggtgaagacgcaagcgg
ccgtggcctcccaggagctgccggataacttgagccaagcggagaggttgctcaaccaac
acgcggccctcaaggaggagatcaacggctacgaggaggactacgccaagatccaagcgg
ccagcgacctcttggccttggaggagacggaggtgccctacctctccttgcagcagtggc
tgcagaagctggacgcgggctgggggaagctgctgcagagctgggagacgcgacgggagg
cgctggtgcaatctcacgtcttccacctcttcctccgagacgtccaacagtgccaaacca
gtctctacaaccaggaaggtgaagaacttctcctggccaaacccgaattaaccggcgccg
ttcgacgccaactggaagagctccgccaatgttgggtagagttggagaccaccagccaag
ccaggagccggcgacccctcaaggaacgcaggagaatcctcctggcctccaaggaggtcc
accaggtcagccacgagctggaggacgaggtgctgtgggtgcaggaccgcctgcccttgg
ccacgctgaaggaccacggcaccaacctccagacggtccagcagtacatcaagaagaacc
agaacctccggcgggagatccaggtccaccgtcctcgcatcgacgaggtgttggaacgcg
ccggagccgtcgccaccatcaaaagtcccgaagccgaaggggtgcgccgtcttctggagc
gtttggggacgatgtggggggaactgcaggagcaggcggagcgtcggcagcaaactttgg
atgccacctaccaactggagcagtactacttcgacgtggccgaggtggagtcgtggttgg
gcgagcaggagctgctgttgatgagcgaggagaaggggaaggacgagcagagcaccctcc
aactcctcaagaagcatctcctgacggagcaaacggtggagaactacgaggagaccatcg
cccaactctcccgccaatgccgggcccttctggaacttggccaccctcaaagcgaacagg
tcagcaggcggcagtcgcaggttgaccggctgtacgtgtctctgaaggacctggtggagg
aacgcaaggccaagttggagcagcaatattggctctaccagctcaaccgcgaggtggacg
agctggagcactggatcgccgagaaggaggtggtggccggctcaccggagctgggacagg
acttcgaacacgtcacgatccgcttcgtcggcgccgtgagggaccttctggcctggatgg
acggagtcctctgccagatgggcgccggagagaagcccagggacgtctcctcggtggagc
tgctgatgaacgaccaccaagggctcaagagcgagatcgaagcccgcgggaagagcatcg
ccgcctgcctggagctgggcaagaccctcatcctcagcaagagcccggcggccggtgaga
tcaaagtccacgtggagaagctgctggcgaagaagaaggagatgatggagaagtgggaca
agcactgggaatggctgcagcagagtgagtcccaccttgggggggtggtggtggggacat
ccgatgatgggacatcatccccatcatctccatcccctgtcagatgcaaagccacgttgg
cggacatcgtggagcagctgcaggagaaggaggctgggggcaccttgccggcatcctggg
tgaacctctactgcgtcctgagcaagggtgacctgggcttctacaaggacgccaagggcc
aagcggccggcagcacccatggtggtgaacccctcctcaacctccaccactccaccagcg
aggtggccagcgactacaagaagaagaagaacgtcttcaaactcaa
DBGET
integrated database retrieval system
