Charadrius vociferus (killdeer): 104291952
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Entry
104291952 CDS
T08577
Symbol
VPRBP
Name
(RefSeq) protein VPRBP
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cvf01001
]
104291952 (VPRBP)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104291952 (VPRBP)
Enzymes [BR:
cvf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104291952 (VPRBP)
Protein kinases [BR:
cvf01001
]
Serine/threonine kinases: Other
Other
104291952 (VPRBP)
Ubiquitin system [BR:
cvf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104291952 (VPRBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
LisH
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
104291952
NCBI-ProteinID:
XP_009889562
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTALLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVPGDMEISFHL
DSGHKTSSRVNSATKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFPPVAAAASPVTLPRTP
RIANGISARLSSHTSVGSTATSVHAQARPSASQGPLALPGPSYASNSPLIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatccgggcatgtggactccaaggctgagctcactgctttgcttgagcaa
tgggagaaagaacatggcagtgggcaagacatggttcctattctcacgagaatgtccgag
ctgattgagaaggagactgaagagtaccgcaaaggggatccagacccatttgatgacaga
cacccaggtcgggcagacccagagtgcatgcttggtcacttactgaggatacttttcaag
aatgatgattttatgaatgcgctagtgaatgcttatgtgatgacaagcagagaacctcca
ttaaacactgctgcctgccgacttcttctggatatcatgccgggactggaaacagctgtt
gtttttcaggaaaaggaaggcatagttgaaaatctctttaagtgggcacgagaggctgat
cagccactaaggacatacgcaacggggctattaggaggagccatggaaaaccaagatatt
gctgcaaattacagggacgagaactcacaattggtggctttggtgcttcgacggctacga
gagttacaggttactgaaatgactacaaaacaagaaaacaagcgtcccagtcctcggaaa
gtgccatcagatcctttactgcctctagatgaagaggctgtggatatggattatggggag
atggcagtagatggagagcaagaggaagttcctggtgatatggagatctcctttcatctt
gattcaggtcacaagaccagtagcagggtaaactctgctacaaagctagatgatggggga
ctgaggaaaagcaaatcagggaaacagcatgaaagagacggcttccggaaggccaagcaa
aagctgggattctccgcttcggaaccagagcggatgtttgttgaactgtccaacagcagc
tggtcagagatgtccccgtgggtgattggcactaattatacactttaccctttgactccc
gccatagagcagagactaattcttcagtacctgactcccttaggggagtaccaagagcta
ctacccatctttatgcagctgggatcaagggagctgatgatgtactacatcgatttgaag
cgaaccaatgatgtgctgctcacttttgaagcccttaagcatttagcatcattgctgctg
cacaacaagtttgcaacggagtttgttgctcatggaggagtacaaaaattgctggagatt
cctcgtccttccatggcagcaacaggggtctccatgtgcttatattatttgtcttacaat
caagacgccatggagagggtgtgcatgcacccccataatgtgctttcagatgtagtaaac
tacaccttatggctaatggagtgctcccatgcctcgggctgctgccatgctactatgttc
ttctccatttgcttctccttccgtgctgtcctggagctctttgacaggcatgatggcctt
cgacgtctggttaacctgataagcactcttgagatcttaaacctggaagaccaaggagcc
ctcttgagtgatgatgagatctttgccagtcgccagactgggaaacacacctgcatggcc
ttacgtcgatactttgaggctcaccttgctatcaaacttgaacaggtgaagcagtcactc
cagcgcactgaaggtggcattctggttcatccacagcccccatataaggcctgttcatat
actcatgagcagattgtagagatgatggagttcctgattgagtatggtccagcgcagctc
tactgggagccagcagaggtttttctcaaattgtcttgcgtccaactcatgcttcagctc
atttcaatagcatgcaactggaagacgtactacgcaaggaatgacacagtacgatatgct
ttggatgtactagccatcctgactgtggttcctaaaatccagttgcagctggcagaacct
gtggatgtgttagatgaagctggatctactgtttccactgtgggtattagcatcatcctt
ggagttgctgagggtgaatttttcatccatgatgccgagattcagaaatcagctcttcag
atcatcatcaattgtgtatgtggcccagataatcggatctccagtatcggcaaattcatc
tctggaactcctcggcgaaagcttcctcaggcccccaagagcagtgagcacacattagct
aagatgtggaatgtggtacagtccaacaacggcatcaaagtgctgctgtcattgctctct
ataaagatgccaatcacagacgcagatcagatccgagcattagcctgcaaagccttggtg
gggctctcacgcagcagtactgtccggcagattatcagcaagctccccctctttagcagc
tgtcaaattcagcagctgatgaaagagccggtgcttcaggacaagcgcagcgagcatgtg
aagttctgcaaatatgctgctgagttgatagagcgtgtctcggggaagccattgctgatt
ggcacagatgtgtctctggctcggctgcagaaagcggatgtggtggcccagtcaaggatc
acgtttcctgagaaggagctgctgctcctgattcggaaccatctcatctctaagggccta
ggagaaactgcatctgtccttactaaagaggctgacctacccatgactgcagcatctcat
tcatctgccttcccccctgttgcggctgctgcctctcctgtgaccctgcctcgcactcct
cgcatagctaacggcatctcagcccgtttgagtagccacacttctgtaggttccactgcc
acctctgtccatgctcaggcaaggccgtctgcatcccaaggtccacttgcccttccaggc
ccttcttacgccagcaactctcctctgattggcaggattagctttgtcagggagaggcca
tctccctgcaacggcagaaaaatcagagtgttgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacgctg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaagaaccctgttgcc
acctgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgc
caagcgccaactaactttacctcacggctgacccgcagggcagcctttccgaagtacgga
ggggtggatggtggctgctttgatagacaccttatatttagcaggttccgtccgatttct
gtgttcagggaagcaaatgaggatgagagtggctttacctgttgcgcgttttctgcaaga
gaacgattcttaatgctgggtacttgcacggggcagttgaagctttataatgtgttcagt
ggacaggaagaggccagttacaactgccataactctgccatcacgcacctcgagccatcc
agggatggatctttattgctgacatctgctacatggagccaacctctgtctgcattgtgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccactatgtggagttc
agcaagcactctcaggatagggtcattggcacaaaaggagacattgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgtgccacctttaaccccactgatgaccttgtcctaaatgatggtgtactctgg
gatgttagatcggcacaagccatccacaagtttgacaaattcaacatgaccatcagtggt
gttttccatcccaatgggctagaggtcatagtcaacacagaaatttgggacctccgaact
ttccatttgttgcacacagtacctgcactggatcagtgtcgtgtggtcttcaactatact
ggcacagttatgtatggagctatgttgcaggcagatgatgaagatgaccttctggaggag
agaatgagaagtccctttggctcttctttcaggacatttaatgcaactgattataaacct
atagctacaattgatgtcaagcggaatatctttgacttgtgcacagacagcaaggactgc
tatctggctgtcattgagaatcaagggagcatggatgccatgaacatggatacagtttgc
agactgtatgaagtgggcaggcagcgtttggcagaagatgaagaggatgaagaagaagat
caggaggaagaagagcaagaggaagaggatgatgatgaagatgatgatgatacagatgac
cttgatgaactagatacggaccagctgctggaggctgagctggaggaggatgagaacaat
gagaatgctggtgaggatggagaaaatgacttttctccctccgatgatgaggagcttgcc
aacctcctggaagagggagatgagggagaagatgaagattctgatgctgatgaggaagtt
gagctgattcttggagacactgacagctcagataactctgacttggaggacgacataatc
ctgtctctgaatgagtga
DBGET
integrated database retrieval system
