KEGG   Charadrius vociferus (killdeer): 104291966
Entry
104291966         CDS       T08577                                 
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104291966 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvf03019]
    104291966 (WDR82)
   03036 Chromosome and associated proteins [BR:cvf03036]
    104291966 (WDR82)
Messenger RNA biogenesis [BR:cvf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     104291966 (WDR82)
Chromosome and associated proteins [BR:cvf03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     104291966 (WDR82)
    COMPASS/SET1 complex (yeast)
     104291966 (WDR82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR55 EIF3I WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st WD_LRWD1 VPS8_N Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_NWD2_C PEP5_VPS11_N MinC_C
Other DBs
NCBI-GeneID: 104291966
NCBI-ProteinID: XP_009889579
LinkDB
Position
Unknown
AA seq 267 aa
MVLEKAQGPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGH
TKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGV
NSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGGFIRLIDAFKG
AILHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAVLDGKHTGPIT
CLQFNPKFMTFASACSNMAFWLPTIDD
NT seq 804 nt   +upstreamnt  +downstreamnt
atggtattggagaaagcacaaggaccaaagagaacactgtacagtaagaagtatggagtg
gatctcatcaggtacacacatgctgccaacactgtcgtgtacagctccaacaaaatagat
gatacaatccgatacctctccctacatgacaacaaatacattcggtatttcccaggacat
acaaaaagagtggttgctctttcaatgtctccagtggatgatacttttatttctggatct
cttgataaaactattagactttgggatcttcgctctccaaattgccagggtttaatgcat
ctccagggaaagcctgtgtgttcttttgacccagaagggttgatttttgctgctggagtc
aattctgaaatggtgaaactttatgatctccgttcttttgacaaggggccatttgctacg
tttaagatgcagtatgatcgaacgtgtgagtggacaggcttgaagttcagtaacgatggc
aaactcatcctcatatcaactaacggagggttcattcgactgattgatgcctttaaagga
gctatcctgcatacatttgggggttataacaatagtaaggctgtcacgctggaggcatca
ttcacaccagactctcagttcatcatgataggttcggaggatgggaagattcatgtttgg
aatggggaaagtgggatgaaggtggctgtgctggatgggaaacatacaggtcctataacc
tgtctgcagttcaatccaaaattcatgacttttgctagcgcatgttccaatatggccttc
tggttgccaactatcgacgactaa

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