Charadrius vociferus (killdeer): 104291972
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Entry
104291972 CDS
T08577
Symbol
NISCH
Name
(RefSeq) nischarin
KO
K24095
nischarin
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvf04990
]
104291972 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
cvf04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
104291972 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
LRR_14
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
104291972
NCBI-ProteinID:
XP_009889584
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MLCSSLILISSFQVYIIQVSVGNHQWTVKHRYSDFHDLHEKLVSEKKIDKNLLPPKKIIG
KNSKSLVEKRQKELEVYLQTLLVKFPVTAPKVLSHFLHFHLYEINGITAALAEELFHKGE
QLLMAGEVFTIRPLQLYAVTQQLLQGKPTCANGDAKTDLGHILDFTCRLKYLKVTGTGGP
FGTSNIQEHLLPFDLSIFKSLHQIEISHCGGKLIKGLTSSKHALATMSVRFSATSMKEIL
VPEASEFDQWEPEGATSSCPVTAVIPTWRTLTTLDMSHNSISQIDDSVKLIPKIEFLDLS
HNGVSLVENLQHLYNLVHLDLSYNKLTSLEGVHTKLGNIKTLNLAGNQLERLCGLNKLYS
LVNLDLSNNKIEQIDEVKNIGNLPCLEKVVLSSNPLSIIPDYRTKVLAQFGDRASEVCLD
NIVTTEKELDTVEVLKAIQKAKEVKYKLSNSDKKISEDSRLTAASSKSNCSSLTVRPSSP
SLPRPVSSSQEIICEETVLASSFLQSSGSTPTDHTVPQRCFEIPDSRCKNRAPASLLDSC
KKYGSGHHMCLTRSEEEHCAVPDPCNTVILPFNCMSYTATNQDFIQHLSALIVQTVQRSL
PSFTENKGIPLGDYRTTDKADGYFEMGLHEGDQTFEFSTTSDTRSSDNVAVESVDIVKIL
WSFSIHIHNGLRQFASCLVLTDDMLAVFEIPHQELRGNCQHISSALKLTLCFPYTDLTEF
GFLLPEICLTLKLKNSDNCLFIVSDSQNLQDFYSCLHTCCSQHYTSVLPSSTLYCGKANL
QEFLCQLMELNCISAEDVEIKGCFPTYLINGNKTNVQKILHPPESADNNKEWSKNVLCSA
LYSSVYKSSDQGPCVVHPCWIFLTPQHLYIVKVNFSLLPGKWIGTEDLGSIFKLNRIPLA
SLVLHPTHGSIQQKGSFLDGHVLELLIGYRIITAVFVLPHEKFHFLRIYSLLRTLLQDVK
TIIIFKASNKSDAVRNHIVDTNRHGQSASFCKPHLTLSSLYPSEFLMQKITEDNQIPLHL
HVSVSLQYVAGLKGNALVEFFHGNIAEVENEELRHLMWSSVLFYKTPSVEVMACVLLSTK
AIYFLLDDSFIHTNEHQSDFWNKENSNCENSSFHLSRCFVLKLNDLQSVNVGLFDQYFRI
TGHSADHIVTCLTRDSYNTHTFIQQLMAVLSLLARTPSPEPVDKDFYSEFGSKNTGKMEN
YELIHSSRVKFIYPNEEEIGDLAFLVAEKMDGLTNLQSLNILLYVLVFQVNHVEESAQNT
SSLQPKTLILTSSDLFLFDEDYISYPLPEFAKEPPKRDKYQLVDGRRIRDLDRVLMGYQT
YPQALTFVFDDVQNQDLMQNLTLDHFGETDSALKVNAKQEGSRSREIQWYIFIPSAESRE
KLISLLARQWEILCGRELPLELTG
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgctttgcagttcccttattttaatttcttcttttcaggtatacattattcaggtcagt
gttggcaatcatcagtggacagtcaaacatcgttacagtgatttccatgacctgcatgaa
aagcttgtttcagaaaagaaaatagataaaaatctgttacctcccaagaagattattgga
aaaaattccaaaagcctggtggagaaaagacagaaggaattagaggtctacctgcaaacc
ctgctagtcaagttccctgttactgctccaaaagttttgtcacacttcctacactttcat
ttatatgagatcaatgggatcactgctgcattggctgaagagctcttccacaaaggagag
cagttattaatggctggagaagtcttcaccatcagacccttgcagttatatgctgtcact
caacagttgctacaggggaagcctacatgcgctaatggagatgccaagacagatctgggt
catattctagacttcacttgtagactcaagtatttgaaggtcactggaacagggggacct
tttggaaccagtaacattcaggagcatctcttgccttttgatctgtcaattttcaaatcg
cttcatcaaatagagatcagtcattgtgggggaaagcttatcaaagggctgacttcatca
aaacatgccctggccacaatgagtgttcgattttcagcaacatcaatgaaggaaatccta
gtgcctgaggcttctgagtttgaccagtgggagccagagggtgcaacttcaagttgtcca
gtgacagcagttatcccaacttggagaactttaacaactttggatatgagtcacaatagc
atctctcaaattgatgattcagtgaaattaattccgaagattgaattcctggatttgagt
cacaatggggtgtctctggtagaaaatttacagcatctttacaaccttgttcacctggac
ttatcctacaacaagcttacatcactagaaggtgttcacacaaaactgggaaacatcaaa
actctgaatttagcaggaaatcagctggaaaggttgtgtggtctcaacaaactgtactca
ttagtcaacttggatctgagcaacaacaaaatagaacagattgatgaagtaaaaaatata
ggaaaccttccatgcttagaaaaggtggtcttatccagcaatccgttgagcatcatccct
gattatcggaccaaagtgcttgctcagtttggggacagggcctcagaggtctgtttggat
aacattgttaccacagaaaaggaactagacactgtggaagtgctaaaagctattcaaaaa
gcaaaggaggtgaaatacaagctgagcaactctgataaaaagatcagtgaggactccagg
ctcactgctgccagctccaaatcaaactgttcttctcttactgttcgtccttcctctccc
tctctgcctcgtcctgtcagctccagccaagaaataatttgtgaagaaacagtcctagcc
agcagttttttgcaatccagtggttcgactcctacagaccatacagttccccagagatgc
tttgaaataccagactccagatgtaaaaatcgggcacctgcctctctattggattcatgc
aaaaagtatggaagcggtcatcatatgtgtttgactcgttcagaggaagaacactgtgcg
gtgcctgacccctgtaacaccgtcatcttgccttttaattgtatgtcatacactgccaca
aaccaagattttatccagcacctttctgccttgatagtgcagactgtgcagagatcgctc
ccctccttcacagagaataaaggaatccctctgggtgattacagaactacagacaaagca
gatggatattttgaaatgggacttcatgaaggagatcagacttttgagttcagcactact
tcagatactcggtcatcggacaacgtagcagttgagagtgttgacatagtcaaaattctc
tggagtttttctattcacattcataatggactcaggcagtttgcttcctgtttggttttg
actgatgatatgctagctgtgtttgagattcctcatcaggaattgagaggaaattgccag
cacatctcttcagccttgaaattaacactgtgttttccgtatactgatctaacagaattt
ggctttctcctgccagaaatctgcttaacactgaagctgaaaaacagtgacaactgcttg
tttattgtttcagactcccagaatcttcaagacttttattcctgtttacacacgtgttgt
tctcaacactacacatcagtgttaccaagctccacattgtactgtggaaaagcaaatctc
caggagtttctctgtcagcttatggaattgaattgcatttcagcagaagatgttgaaata
aaaggttgtttcccaacctatctcattaacgggaataaaaccaatgttcagaaaatcttg
catccaccagagtcagctgacaataacaaagaatggtcaaaaaatgttttgtgttctgca
ctttattcttcagtgtataaatcttccgaccagggtccctgtgtggtccatccgtgttgg
atatttctgacgccccagcatttgtacatagtaaaggtgaatttcagtttactgccaggt
aaatggataggcacagaagacttgggaagtatatttaagctgaataggattccgttagca
tcacttgtcttgcatccaactcatggttccatccagcagaagggttcatttttggatggg
cacgtgctggagttgctcattggatacagaattattacagcagtgtttgttctacctcat
gagaaattccacttcctaagaatctacagtcttttaaggacactcctgcaggatgttaag
actattattattttcaaagcttcaaacaagtcagatgctgtaagaaatcacattgtggac
acaaacagacatggtcagtcagcaagtttttgcaagcctcatctgacgctgtcatcttta
tatccatctgaatttcttatgcagaagataacagaagataaccagattcctcttcacctt
cacgtttctgtgtctctgcagtatgtggctgggttgaaaggaaatgccctagttgagttt
ttccatggcaacattgcagaggtggaaaatgaagagttgagacatctcatgtggtcttca
gttctgttttacaagactcccagtgtggaagtgatggcttgtgtgcttctctcaacaaaa
gccatttactttctgttggatgattctttcattcatactaatgagcaccagtcagatttt
tggaacaaagaaaactccaattgtgaaaatagttctttccacctctctcgctgctttgtg
ctaaaacttaacgacctgcaatcagtaaatgttggcctgtttgaccaatacttccgaatt
actggacactctgcagatcatatagtcacctgcctgacaagagacagttacaacactcac
accttcatacagcagcttatggcagttctgtcactgcttgcacgcacaccttcgcctgag
ccagtagataaagacttctactctgaatttgggagtaaaaacacaggaaaaatggagaat
tatgaactgattcactctagcagagtaaaatttatttatccaaatgaagaggaaattggg
gaccttgcttttctagtggcagagaagatggatggtttgactaatcttcaatccctcaac
atccttctgtatgtgttggtgtttcaagtaaatcatgtcgaagagtctgcccaaaacact
agttcacttcaaccgaaaacacttatattaaccagctctgatttgttcctctttgatgaa
gattatatcagttacccactacctgaatttgctaaggaaccaccaaagagagataagtat
cagcttgtagatggaagacgaattcgggatttagatagagtactgatgggttatcagacg
tatccacaggccctcacatttgtgtttgatgatgttcagaatcaggatctgatgcagaat
ttaacactggatcactttggagaaactgatagtgccctgaaggtaaatgctaaacaagaa
ggcagtaggagcagagagatccagtggtacatctttatcccaagtgcagaaagcagggag
aaactaatttcattgcttgcaagacagtgggagatcttgtgtggtagggaactgcctttg
gaactcactggttaa
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