Charadrius vociferus (killdeer): 104292047
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Entry
104292047 CDS
T08577
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvf04515
]
104292047 (DSCAM)
Cell adhesion molecules [BR:
cvf04515
]
Immunoglobulin superfamily
DSCAM family
104292047 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Ig_4
C1-set
V-set_CD47
Pur_ac_phosph_N
Sp38
Interfer-bind
C2-set_3
ChitinaseA_N
DUF6377
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
104292047
NCBI-ProteinID:
XP_009889671
LinkDB
All DBs
Position
Unknown
AA seq
2007 aa
AA seq
DB search
MPYADVLSDREVFSEDLHASLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYLATG
EEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKAVLR
EPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGPRFLITSTGALYI
LDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVE
LPCKASGHPAPKYRWLKDNVPWEPDSRFRQTVTGLLIENTRPSDTGNYVCEVWNNYGTAE
MIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGNNVRIT
GINRENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVILEDGTPKIISAFSEKVVSPGEP
VSLMCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVVSYLNISNTQVRDGGVYR
CTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNL
LPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFE
FPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMH
NGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPTIVW
KYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSMYLT
VKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTKEVG
DEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARSIAL
RWTMGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHPSSTYNIRMYAK
NRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGYQIG
YREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEIITTT
LEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEIKNV
TTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASAS
TVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVWVVA
VTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPAPTVKWMKDS
NGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQVQVPPDQP
RLTVSKTTSSSITLSXXXXXXXXXXXXXRGYILQYSEDNSEQWGSFPISPSERSYRLETL
KCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWND
GGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQA
KFATLNYDGSTIPPLIKSVVQSEEGLATNEGLKMLVTISCILVGVLLLFVMLLIVRRRRR
EQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDDR
STVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRSAKTGPT
ARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRPAGSVDKESDSYSVSPSQDTDRARSSM
VSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNDYTDSLTSS
TPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVQGTSRD
LGLGQACLEPQKSRTLKRPTVLEPIPMETSSTREVQSWQPGAVATLPQREGAELGQAAKM
SSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgccttatgctgatgtgctttcagacagagaggttttcagtgaagatctacatgccagt
ctatattttgtcaatgcatctctgcaagaggtagtgtttgctagcaccacagggacattg
gtaccctgtccagccgcagggatcccccctgtgacgctcagatggtacctagcaacgggc
gaggagatctacgatgtcccagggatccgccacgtccaccccaatggcactctccaaatt
ttccccttccctccttcaagctttaataacttaatccatgataacacttactattgcaca
gctgaaaatccttcagggaaaatcagaagtcaggatgttcacattaaggccgttttacgg
gaaccctatacagtccgtgtggaggaccagaaagccatgagaggcaatgtagcagtgttc
aagtgcattatcccctcctctgtggaggcatacatcactgttgtctcatgggagaaagac
acagtctcgcttgtctcaggacctagatttctcatcacatccacgggagccttgtatatt
ttagacgtacagaatgaagatggactgtacaactaccgatgtatcacaaggcacagatac
actggagaaacacgacaaagcaacagtgcaagactttttgtatcagatccagcgaattca
gctccatcgattctagatgggtttgaccaccgtaaagccatggcaggacagcgagtggag
ctgccttgcaaagcatcagggcaccccgcaccaaagtatcgttggctgaaggacaacgtt
ccctgggagcctgacagcaggtttcggcagacagttacaggtctgctgatcgagaacaca
cgtccctcggacacaggcaactatgtctgcgaggtgtggaacaactatgggactgccgag
atgatagggcgactgtatgtaaaacaaccactaaaagccacaatcagcccacggaaagta
aaaagcagcgtcggtagtcaagtgtccttgtcctgcagtgtgacgggaactgaggaccag
gagctctcctggtatcgtaatggtgaaatcatcaaccctggtaacaatgtccggatcact
ggcatcaatcgggagaaccttattatggatggcatggccaagagtgatggtggagcttac
cagtgctttgtgcgcaaggataagatgtctgctcaagactacgttcaggtgatactagaa
gatggaactcccaaaataatttctgccttcagtgagaaagtggtgagtccgggagagcca
gtctcccttatgtgcaacgtgaaggggactcctctgcctactatcacttggacactggat
gaagatcccattgtgaaggatggcagtcatcgtatcagccagattatcacctctgaaggc
aacgtggtcagttacctgaatatctctaacactcaggtccgagatggtggagtttatcgc
tgtactgccaacaactctgctggagtcgtcctgtaccaggctcgaataaacgtaagaggg
ccagcaagcattcggccaatgaagaacatcacagcaatagctggacgggacacctacatc
cactgccgtgtgattggctacccatattactccatcaagtggtacaagaactctaacctg
ctaccctttaaccatcgccaagtggcatttgagaacaatgggacactgaagctttcagat
gtgcagaaggaagtagacgagggcgaatacacatgcaatgtcctcgttcaaccccagctt
tccaccagccagagcgtgcatgtgacagtaaaagttccgccttttattcagccttttgag
ttcccgcggttctccatcgggcagcgggtcttcattccctgcgtggtggtctctggggat
ttgcccatcacaatcacctggcagaaggacggcaggccgatcccagccagcctcggggtg
acaattgacaacatcgacttcaccagctccttaaggatttctaatctttcgctgatgcac
aatgggaattatacctgtatagctagaaatgatgcagcagctgtggagcaccaaagccaa
ttaatcgtgagagtgccacccaggtttgtggttcagcccagcgaccaggatgggatctat
ggaaaagctgtaattctcaactgctctgcggagggttatcctgttcctaccattgtctgg
aagtactcgaaaggtgccggggttcctcagttccagccaattgcattgaacggtcgtatc
cagcttctcacgaatggctccttgctgattaaacatgtgctggaagaagacagtggatac
tacctctgcaaggtcagcaatgatgtgggagcagacgtcagcaagtccatgtacctcact
gttaaaattccagctatgataacttcctatccaaataccaccttggcaacgcaaggtcaa
aagaaggagatgagctgcacagcacatggagagaaacccatcattgtccgctgggaaaaa
gaagaccgaatcattaaccctgaaatgtcccgttaccttgtttccaccaaggaagttgga
gatgaagtgatctctactctgcagattttgccaaccgtgcgtgaagattctggcttcttt
tcctgccatgccatcaattcttatggggaggatcgtggaataattcagctcactgtgcaa
gagcctcccgaccctcctgaaatagaaatccgagaggtgagagcccgcagtattgccctc
agatggaccatgggatttgatggaaacagcccaatcaccggctatgatatcgagtgcaag
aacaagtcagactcttgggattctgtccagagaaccaaagacgtttcccctcagctaaac
caagccactatcattgaccttcacccttcctcaacttacaacattcgcatgtatgccaag
aatcgcatcggcaagagtgaggccagcaatgagctcaccatcactactgatgaagcagct
cctgatggtccacctcaggatgtccaacttgagcctatatcttcacaaagcattagggtc
acctggaaggctccaaagaagcacctgcaaaatggaattattcgtggataccagataggt
tatcgggagtacagtgcagggggcaatttccagtttaacatcatcagtattgataccact
ggggacagtgaagtttatacgctgaataacctgaaaaaattcacacagtatggcatggta
gtccaggcttgtaaccgggctggaataggaccttcttctcaggaaatcatcaccactact
cttgaggatgtgcccagttgccctccagggaatgtgcaagccactgccacatcaccagaa
accatctctatttcttggtcaacattggcgaaggaaactctgaatgggattctgcaagga
ttcagggttatctactgggccaatctcttggacggagagctaggagagataaagaatgtc
actactacacagccatctctagagcttgatggcctggaaaaatacaccaactacagcatt
caagtgttggcttttacacgagctggagatggagtgagaagtgaacaaattttcacccgc
actaaagaagatgttccaggtcctcctgctggtgttaaagcagctgcggcttcagcctcc
accgtcttcgtgtcctggctccctcccctcaagctgaacggcatcattcggaaatacact
gtcttctgctcacacccctaccccacagtaatcagcgagtttgaagcctctcccgactca
ttttcctacagaatccccaacctgagccggaaccgccagtacagcgtctgggtggtagca
gtgactgctgcgggaagaggcaacagcagcgagattatcactgtggaaccgctagcaaaa
gctcctgccaggattttgacattcagcggcacagtgacaactccttggatgaaggacatt
gttctcccttgcaaagccgtgggagacccagctccaacagtcaaatggatgaaggatagt
aacgggacacccagtctagtgatgattgatgggcgacgaagcatctttagcaatggcagc
tttgtcatccgtactgtgaaagcagaagactctggatactacagttgtgtggccagtaat
aactggggatcagatgaaataattttgaatttgcaggtacaagttccaccagaccagcca
agactcactgtatccaaaactacatcttcctctatcactctttcnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnntccgaggttatattttgcagtactcagaagataacagt
gagcagtggggtagttttcccattagccctagtgagaggtcgtaccgtttagaaacactg
aaatgtggcacttggtacaagtttactctaactgctcagaacggagtggggccaggacgc
atcagtgagatcattgaggccaaaacgcttggaaaagaaccgcagttttcaaaggaacaa
gagctctttgctagtatcaacaccacaagagtgagactgaacctgataggctggaatgac
ggtggctgtcccatcacttccttcacccttgagtaccggccatttgggacaaccgtctgg
acaaccgctcagcggacatccctgtcaaagtcctacatactatatgacctccaggaggca
acctggtatgaacttcaaatgagagtgtgcaacagtgctggctgtgcagagaaacaagcc
aaatttgcaacgctcaattatgatggcagtacaatccctccactcattaagtcagttgtg
caaagtgaggaagggctggcgaccaacgaagggctaaagatgctggtgaccatctcctgt
atcttggttggggtcttgctgctttttgtgatgctgctgatcgtgcggaggaggaggagg
gagcagagactgaagaggctgcgagatgcaaagagtttggctgaaatgcttatgagcaag
aacaccaggacatcagatacacttaataagcagcagcaaacactgaggatgcacatagac
attcccagagcacagcttctgattgaggagagggacacgatggagaccattgatgacaga
tcaacggttctgctcactgatgctgactttggagagacgtctaagcagaagtcgctgact
gtcacccacacggtacattaccagtctgtgtcacaggctacaggtccactggtggatgtt
tctgatgcccggccaggaacaaatcctaccacaaggaggagtgccaaaaccggacccaca
gctcgcaaccgctatgctagtcagtggaccctcaacagacctcaccctaccatatcagct
cataccctcaccacagactggaggctgcccacccccaggccagcagggtcggtggacaag
gaaagcgacagctacagcgtcagcccctcacaggacacagatcgagcaagaagcagcatg
gtctccacagaaagtgcctcctcaacatacgaagagctagcgagggcgtatgagcacgca
aaaatggaagagcagctgagacatgccaagttcaccattacagaatgcttcatatcagac
acatcatcggagcagctcacggcagggactaatgactacacagacagtctgacctcaagc
acgccgtcagagtcggggatttgcaggtttaccgcatccccccccaaacctcaggatgga
gggcgagtgatgaacatggcagttccaaaggcacatcggccaggtgatctcatgcatttg
ccaccctaccttaggatggactttttattgaaccgtggtgtgcagggcacgagcagagac
ctgggtttggggcaagcctgcttggagccgcagaaaagccgaaccttgaagcgccccacc
gtcctggagccgatacccatggagacgtcctccacaagagaagtacagtcatggcaacct
ggtgctgtggcaacgttacctcagcgagaaggagctgagctaggacaggcagcaaaaatg
agcagctcccaagaatccctgctggactcccggggccacttgaaaggaaacaatccctac
gcaaaatcttacaccctggtataa
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integrated database retrieval system
