Charadrius vociferus (killdeer): 104292087 Help Entry 104292087         CDS       T08577                                  Symbol COL18A1 Name (RefSeq) collagen alpha-1(XVIII) chain   KO K06823   collagen type XVIII alpha Organism cvf  Charadrius vociferus (killdeer) Brite KEGG Orthology (KO) [BR:cvf00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cvf04147]     104292087 (COL18A1)    00535 Proteoglycans [BR:cvf00535]     104292087 (COL18A1)    00536 Glycosaminoglycan binding proteins [BR:cvf00536]     104292087 (COL18A1) Exosome [BR:cvf04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    104292087 (COL18A1) Proteoglycans [BR:cvf00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    104292087 (COL18A1) Glycosaminoglycan binding proteins [BR:cvf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104292087 (COL18A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Endostatin Collagen Collagen_trimer Laminin_G_3 HEAT_MROH2B_C Motif Other DBs NCBI-GeneID:  104292087 NCBI-ProteinID:  XP_009889710 LinkDB All DBs Position Unknown AA seq 1439 aa AA seqDB search AKRIWFLLQKVIELLQDADGEVVGVTLSVLSKMLLAKDMPIASPIALQLAEMLRPLFDNE SSYMQLLSMHLFQGVMEFVAEAGKKLLKTHVHQSLLPLLCHLYNENQRMAELAENSSRAV EYLHQCLLYLQTPQESMCPPRRLLLGLFVLLVPAASQEPENLSTEVSLLELIGDPPPEEI LKIYGPDNNPGYVFGPNANTGQVARYHLPSPFYRDFSLLFHIQPTTPRAGVLFAVTDSSQ SIIYVGIKLSELRAGKQQIIFYYTEPGSPSSYAAATFTVPTLLNQWTRFAISVEEDEVVL YLDCEERERVRFERSPDEMELEDGSGLFVAQAGGADPDKYQGVIADLKLQGDPRAAERQC EEEEDDTEEVSGDFGSGAEGGHQPSGKDRGAPGLVDAVPVTSPPMAASGGPRSGGGSPQQ AERTRVEETLQVSMGGTGPKGEKGEKGERGPKGDSGTGSIAGMGSVKGEKGEKGEVGVKG SAGFGYPGSKGQKGEPGDPGPPGTLSRHSDGSVVEQVTGPPGPPGKDGAPGRDGEPGDPG EDGKPGDMGPQGFPGMPGEPGLKGEKGDPGVGPRGPPGPPGPPGPPGPSSKHDKLTFIDM EGSGFAGDLESLRGPRGLPGPPGPPGVPGLPGEPGRFGMNHTDLLGPPGLPGRDGTPGSP GPVGPQGPPGRDGAAGLPGPKGEQGDVGDLGLPGAPGPKGSKGETGPAGAPGETGLAGLP GPIGPRGQPGPPGPPGPPGLGYEAGFGDMEGSGLPFAASSLGPPGPEGPQGVPGLPGVKG EVGSPGQPGLPGPKGDAGVPGVDGRPGLEGFPGPQGPKGDRGSPGEKGERGQDGVGLPGP PGPPGPPGQVITVSSKDKSLVALPGPEGRQGHAGFPGPVGPKGDRGSSGPQGSPGLKGEK GEPGVIISPDGTVVTAQVKGEKGEPGLRGPMGPSGPQGRAGMKGEIGFPGRPGRPGMNGL KGEKGDPVDVSSVLGLRGPPGPPGPPGPPGPPGSIVYDSSNAFSDSGHPVLPAFPGFHQF PGQKGEKGDAGAPGPPGHFPYDPSRFSTNLQGDKGEAGPKGEKGEPGSTPLYGPSVSGLP GPPGPQGYPGLPGPKGDSIVGPPGPPGPQGPPGIGYEGRQGPPGPPGPPGQPSFPGPHRQ GISIPGPPGPPGPPGPPGTSGMSLGLRTLPTYQAMLSATHELPEGGLIFLTDRQELYVRL RRGFRRVLLEEHTLIPSSALDNEVYDKPPSVHYAGPQPRGPLHTLRNHSPPPTARPWRGD EVVANKHRLPAAPLSVGMRGIRGADFQCFQQARQVGLAGTFRAFLSSRLQDLYSIVRRAD RAAVPIVNLRDEVLFSNWEALFTGSGAPLQAGARILSFDGRDVLQDAGWPQKSIWHGSDA KGRRLPESYCETWRTEEXXXXXXXXXXXSGKLLLQVASSCQHTFVVLCIENSFMTATKK NT seq 4320 nt NT seq  +upstreamnt  +downstreamnt gccaaaagaatatggttcctgctgcaaaaggtcatagagctactgcaggatgcagatggg gaggtggttggggtgaccctctctgtgcttagcaagatgctcctggccaaagacatgcca attgccagccccatcgctctgcagctggctgagatgctccgtccactctttgacaatgag tccagctacatgcaactgctctccatgcacctcttccaaggtgtgatggagtttgtagcg gaagcgggaaaaaagctgctgaagacacatgtgcaccagagcctgctcccactgctctgc cacttgtataatgagaaccagcgcatggcagagctggcagagaacagcagcagagcagtt gagtacctgcatcagtgcctgctgtacctgcagaccccacaggagtccatgtgccccccg cggcggctgctgctcgggctctttgtcctgctcgtccccgccgcttcccaggagccggag aacctgagcacagaggtcagcctcctggagctgatcggagaccccccgccagaggagatc ctcaaaatttatggccctgacaacaaccctggctatgtctttggccccaatgctaacacg ggccaggtggcccggtaccacctaccgagccctttctaccgggacttttccctcctgttc cacatccagcccaccaccccccgtgctggtgtgctctttgctgtcacagactcctcgcag agtatcatctatgtgggcatcaagctgtcagagttgcgggcgggcaagcagcagatcatc ttctactacacagagccaggctcaccaagctcatatgcagcagccaccttcaccgtgccc actttgctgaaccagtggacgcgctttgccatcagcgtggaggaggatgaagttgttctt tacctggattgtgaggagcgtgagcgggtccgctttgagcgctccccagatgagatggag ctggaagatggatccgggctctttgttgctcaggctggaggggccgacccagataaatac cagggagtgattgctgatttgaagctgcaaggggacccgcgggcagctgagcgccagtgc gaggaagaggaggatgacactgaggaggtctctggtgattttggcagtggggcagaaggt ggacaccaaccctcagggaaagacaggggtgccccggggctggtggatgctgtccctgtc acctctccccccatggcagcgagcggcgggccgaggagtggtgggggctccccgcagcaa gctgagaggaccagagtggaggagacactgcaggtctccatgggaggcacaggtcccaaa ggcgaaaaaggggagaagggcgagcgtggcccgaaaggggattcagggactggcagcatc gcagggatgggcagtgtcaaaggcgaaaagggggagaagggagaagtgggcgttaagggc agtgctggatttggctatcctggctccaagggccagaaaggggagccgggtgaccccggc ccccccgggaccctctcacggcactctgatggctcagtggtggaacaggtcactggtccc ccagggccaccagggaaggatggagcccctggcagggacggcgagcctggtgatcccggc gaggatggcaaacctggtgatatggggccccaagggttccccgggatgccgggggagcct ggtctgaagggggagaagggtgacccaggtgtagggccaagggggccccctggaccacct ggtcccccaggacccccaggaccctcatccaagcatgacaagctgaccttcatcgacatg gagggctctggctttgctggcgatctggagagcctgcgggggccaagagggctgcccggt cccccgggaccacccggcgtgcctggtttgccaggggagccgggacggtttgggatgaac cacacagacctgctgggaccgccggggctgccgggcagggatgggacccctgggtctcca gggccagtgggtcctcagggtcctcctggaagagatggggcggctgggctgccggggccc aaaggagagcagggcgatgtgggcgaccttggcctccctggtgcgccaggacccaagggc agcaagggagaaacaggaccagcaggagccccgggagaaacagggttagctggacttcct gggcccatcggaccccgagggcagccagggccccctggtcccccaggaccaccagggctg ggctacgaggctggatttggagacatggagggctcagggctgccattcgctgccagctcc cttggaccacctggaccagaaggaccacagggggtgccgggactgccaggggtgaagggg gaggttggcagccccgggcagcctggcttgcctggaccaaagggagatgctggtgtgcct ggtgtggacggccgccctgggctggagggcttccctggaccgcagggacccaaaggtgac agaggcagtcctggcgagaagggcgagcgaggccaagatggtgtggggctgcctggaccc cccggtccacctggtccccccggacaggtcatcactgtctcaagcaaagataaatctttg gtggctttgcctggtccagagggcagacaaggtcacgctggcttcccgggcccagtggga ccaaaaggagaccgggggtcatctggtccccagggctccccagggttgaagggagagaag ggggagcccggcgtcatcatcagccctgatgggactgtggtcactgcgcaggtgaaagga gaaaagggggagccggggctgcggggaccaatgggaccatcgggtccccagggacgagca gggatgaagggagagatcggctttccgggcagacctggacgtcctggcatgaatgggctg aagggtgagaagggtgaccccgtggatgtcagtagcgtgctgggcttgcggggtcccccg ggacccccagggccccctgggccccctgggccacctggcagcatagtctacgacagcagc aatgccttcagtgactctggccatcccgtgctgccagccttccctggtttccaccagttt ccaggacaaaagggagagaaaggagatgctggagccccagggcccccaggccacttcccc tacgacccgagtcgctttagtaccaacctgcagggtgacaagggggaggcaggtcccaag ggcgaaaagggtgagccaggcagcaccccactctatggtcccagtgtctccgggctgcca gggcctccagggccccagggctaccctgggctgccgggtcccaagggggacagtatcgtt gggccaccagggcctcctggacctcagggcccccctggtatcggatatgaggggcggcaa ggcccccctggccctcctggcccccctggtcaaccctccttcccaggcccccacagacaa ggtatcagcatccctgggccccccggaccaccaggacctcctggaccaccaggcaccagc gggatgtccttggggctgcgcaccctgccaacctaccaggcaatgctgagtgccacacac gagctgcccgagggtggcctcatcttcctgaccgacaggcaagagctttatgtccgcctg cgcaggggcttccgccgggtgctgctggaggagcacaccctgatccccagctcagctctg gacaatgaggtgtatgacaagccccccagtgttcactatgctggcccccagccccgtgga cccctgcatacccttcgcaaccacagcccaccacccaccgcccgaccctggcgtggggat gaggtggtggccaacaagcaccgcctgcccgctgccccactgagcgtgggcatgcgcggc atccggggtgctgacttccagtgcttccagcaagcccggcaggttgggctggctggcact ttccgcgccttcctctcctcccgcctgcaggacctctacagcattgtgcgtagggctgac cgtgccgccgtgcccatcgtgaacctccgagatgaagtgctcttcagtaactgggaagcc ctattcacggggagcggggccccactgcaagctggtgcccgcatcctctcctttgacggc cgggatgtcctgcaggatgcgggatggccacagaaaagcatttggcacggctcggatgcc aagggccggcgcttgcccgagagctactgtgagacatggcggacggaggagnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnctctggcaagctgctgctgcaggtggccagcagctgc cagcacaccttcgttgtcctctgcatcgagaacagcttcatgactgccaccaaaaagtga

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