Charadrius vociferus (killdeer): 104292131
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Entry
104292131 CDS
T08577
Symbol
THBS2
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04145
Phagosome
cvf04510
Focal adhesion
cvf04512
ECM-receptor interaction
cvf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104292131 (THBS2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104292131 (THBS2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104292131 (THBS2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104292131 (THBS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104292131 (THBS2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvf04147
]
104292131 (THBS2)
00536 Glycosaminoglycan binding proteins [BR:
cvf00536
]
104292131 (THBS2)
Membrane trafficking [BR:
cvf04131
]
Endocytosis
Phagocytosis
Opsonins
104292131 (THBS2)
Exosome [BR:
cvf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104292131 (THBS2)
Exosomal proteins of colorectal cancer cells
104292131 (THBS2)
Exosomal proteins of bladder cancer cells
104292131 (THBS2)
Glycosaminoglycan binding proteins [BR:
cvf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104292131 (THBS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_CCN
TSP1_ADAMTS
Laminin_G_3
EGF
cEGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
104292131
NCBI-ProteinID:
XP_009889764
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MLQKSRLLWLAVLITLWVSSNAQDGDKEEETTFDLLQISNINRKTVGAKLFRGPDPTIPA
YRFIRFDHIPPCKPEKLKKIVKLIRQNEGFILSATLRQDRQSRGTILALEGPGISERQFE
IISNGRANTLDLIYWVDGFQNVISLEDVDLADSQWKNLTVQITGENYNLYVGCDLIDSFI
LEEPFYEQLKAENSRMYVAKGSIRENHFRGLLQNIQLIFDTSIEDVLRKKGCQRSQSTEV
NTINESTEILHLSPAVTTEYVGEKPEKKAEFCDRSCEELGTMFTELTGLRIVVNNLADNL
QKVSEENQIMWELIGPNKTLKNQSVCWQDGRVFADNESWIVDSCTKCTCQDSKIVCHQIT
CPAVSCADPSFVEGECCPVCSHSDDSEEGWSPWSDWTKCSVTCGSGTQMRGRSCDVTRSA
CTGPHIQTRMCSFKKCDHRIRQDGGWSHWSPWSSCSVTCGVGNITRIRLCNSPIPQMGGK
NCVGNGRETEKCEKVPCPVNGQWGPWSPWSACTVTCGGGIRERSRLCNSPEPQYGGKPCV
GDTKQHDMCNKKDCPIDGCLSNPCFPGAECNSYPDGSWSCGPCPAGYLGNGTVCEDLDEC
IAVSDVCFKVNQVHRCVNTNPGFHCLPCPPRYKGSQPYGVGLEVAKTEKQVCEPENPCKD
KTHSCHKSAECIYLGHFSDPMYKCECRTGYAGDGRICGEDSDLDGWPNNNLVCAANATYH
CVKDNCPLLPNSGQEDFDKDGKGDACDEDDDNDGVEDDKDNCPLLFNPRQFDYDKDEVGD
RCDNCPYVHNPAQIDTDNNGEGDSCAVDIDGDDIFNERDNCPYVYNTDQSDTDGDGVGDQ
CDNCPLMHNPDQTDADNDLVGDQCDNNEDIDEDGHQNNQDNCPYIPNANQADHDKDGKGD
ACDPDDDNDGVPDDRDNCRLRYNPEQEDSDGDGRGDICKDDFDNDNVPDIYDVCPENNAI
SETDFRKFQMVPLDPKGTAQIDPNWVIRHQGKELVQTANSDPGIAVGYDEFSSVDFSGTF
YVNTDRDDDYAGFVFGYQSSSRFYVLMWKQVTQTYWEDKPTRAYGYSGVSLKVVNSTTGT
GEHLRNALWHTGNTPGQVRTLWHDHKNIGWKDYTAYRWHLIHRPKTGLIKVLVYEGKQVM
VDSGPIYDTTFAGGRLGLFVFSQEMVYFSDLKYECRDA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaagagtaggctgttgtggcttgctgtgttgataaccctgtgggtttcctca
aatgctcaggatggtgacaaggaagaggagactacctttgatttacttcaaatcagtaac
ataaaccgaaagacagttggagcaaaattgtttcggggtccagaccccactatcccagca
tatcgtttcattcggtttgaccatatacctccgtgtaaaccagagaaattaaaaaagatt
gtcaaactcatacggcaaaatgagggctttatcctttcagccaccctgagacaggacagg
caatctagaggcactatccttgctttagagggtcctggcatcagtgagaggcagtttgag
atcatttccaatggccgggccaacaccctggaccttatctattgggtggatggcttccag
aacgtgatttccctggaagacgtggaccttgccgactcgcagtggaagaacctcaccgtg
caaataacaggggagaactacaacctctatgttggctgtgacttaattgacagcttcatc
ctggaggagcctttctatgagcagctgaaagcagagaacagcagaatgtatgtggcgaaa
gggtccattcgggagaatcatttcaggggtcttttgcaaaatattcagttaatctttgat
acttcaatagaggatgttctgcgtaaaaaaggatgccagaggagccagtcaactgaagtg
aacaccatcaatgagagcactgaaatccttcacttgagccctgctgtcacaactgagtat
gtgggtgagaagccagagaagaaggctgagttctgtgaccgctcctgtgaagagctggga
acgatgttcacagagctcactggactgcgcatcgtggtgaacaacttagctgataacctc
caaaaagtgtctgaggagaaccaaattatgtgggaattgattgggcctaacaaaacactg
aagaaccagtcagtttgctggcaggatggccgtgtctttgcagataatgaaagctggatt
gtagatagctgcaccaaatgcacctgccaggattctaaaattgtgtgccatcaaatcacc
tgcccagcagtctcctgtgctgatccatcttttgttgaaggtgaatgctgtccagtctgc
tctcactctgatgacagtgaggaaggctggtcaccatggtctgactggacaaagtgctca
gttacctgtggctctgggactcagatgcgaggaaggtcgtgtgatgtcaccaggagcgct
tgtacaggcccacacatccagacaaggatgtgcagctttaagaaatgtgaccatcgcata
cgtcaagatggtggctggagtcactggtctccctggtcttcctgttcagttacttgcgga
gtgggaaatatcacccgcatccgcctctgcaattcccctatcccccagatgggcgggaaa
aactgtgtgggaaatggacgtgaaacagagaagtgtgagaaggttccatgtccagtgaac
ggccagtggggtccttggtctccatggtctgcctgcactgtaacctgtggaggaggaatt
cgtgagaggtctcgcctctgtaacagtccagagccacagtatggaggaaagccatgtgtg
ggagataccaagcaacatgatatgtgcaataagaaggattgcccaattgatgggtgtttg
tcaaatccttgttttcctggagcagaatgcaacagttacccagatgggtcttggtcatgt
gggccatgcccagcaggttaccttggcaatggtaccgtctgcgaggatcttgatgagtgt
atagctgtgtcagatgtttgctttaaggtgaatcaggtccatcgctgtgtgaacacaaat
ccgggtttccactgcttgccatgtcctccacgctataaaggaagtcagccctatggtgta
gggctggaggttgccaagacagagaagcaagtctgtgaacctgagaatccatgcaaggac
aagacacacagctgccataagtctgcagaatgcatctatctgggccatttcagtgatcct
atgtacaaatgtgaatgtaggacaggttatgctggagatggacgcatctgtggtgaggat
tcggatttggatggctggcctaataataacttggtctgtgctgctaatgcgacataccat
tgtgtgaaggataactgtccccttctgccaaactctggccaagaagactttgataaagat
ggcaaaggagatgcctgtgacgaggatgatgataatgatggcgttgaagatgacaaagat
aattgccctcttctgttcaaccctcgtcagtttgattatgacaaggatgaagttggtgac
cgctgtgataactgcccctatgtgcacaaccctgctcagattgacacagataataatggg
gagggtgactcatgtgctgtggatattgacggagatgacatttttaatgaacgagataat
tgtccttacgtctataacacagaccagagtgatacagatggtgatggagttggtgatcag
tgtgataattgcccattgatgcataatccagaccagactgatgcagataatgaccttgtt
ggtgaccagtgtgacaacaatgaggacatagatgaagatggacaccagaacaatcaagat
aactgcccttacatccccaatgctaaccaggcagaccacgataaagatggtaaaggagat
gcctgtgatcctgatgatgacaatgacggtgtcccagatgacagggacaattgtcgcctt
cgatacaaccctgagcaggaggactctgatggtgatggcagaggtgatatttgcaaagat
gactttgataatgacaatgtcccggatatttatgatgtgtgccctgaaaacaatgccatc
agtgaaactgatttcagaaagttccaaatggtccccctggaccccaagggaacagctcag
attgatcccaactgggttattcgtcaccaaggcaaggaactggtgcagactgccaactct
gatcccggaattgctgtaggctacgatgagttcagctccgttgacttcagtgggacgttc
tatgttaacacagaccgcgatgatgactatgccggctttgtgtttggctaccagtccagc
agtcggttttatgttctgatgtggaagcaggtcactcagacctactgggaggacaaaccc
accagggcttacggctattctggtgtgtcgctcaaagtagtgaattcaacaactggtact
ggtgaacacttgagaaatgctctctggcacacaggaaacaccccggggcaggtgcgtact
ttgtggcatgatcacaagaacattggctggaaagattatactgcttacaggtggcatttg
attcataggcctaaaacgggattaataaaagttttagtgtatgaagggaaacaagtcatg
gtggattctggaccgatctatgatacaacctttgctggtggacgattaggtctctttgtc
ttctctcaagagatggtctatttctctgacctcaaatatgaatgcagagatgcttga
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integrated database retrieval system
