Charadrius vociferus (killdeer): 104292161
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Entry
104292161 CDS
T08577
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104292161
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cvf04091
]
104292161
Lectins [BR:
cvf04091
]
C-Type lectins
Lecticans
104292161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104292161
NCBI-ProteinID:
XP_009889799
LinkDB
All DBs
Position
Unknown
AA seq
1811 aa
AA seq
DB search
MKPFEKILFFLLLPVLLRVAYSSFISVNLGVKVMKGQSVFLSEDDLKFAIPREKDVCKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDVVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSRALEVPEYYGLSRVIDKNVLTFDYDRKINLDCTISIASSETH
LPAYGQLVIGEVQQEQLRGDQPQSFFPGPEHSLGQPCRNGSCMLRVGVIHNSKMSCKEFL
RMGIRYQHLDPPSPDTDYIPVRLDLTDSRSKTLHKTEYAWLPVQIKGAIPNQIPKAVSTA
KFILEVDQFILTPITTTTVDAEDNETPKSLLVFNITKPPPQGFITHLSDHTKPVGSFTWK
DLSDMLIAYQPPNNSCTERRNYEVEFEVHDFYFERSLPITVHLSIRTTDTNAPRVSWNTG
LNLLEGQSRPITWQHFQIVDNDDIQNVRLVTVDGLQHGRLTVRGGKGFMFTVSDIQAGVV
HYHHDDSDSTKDFVVFRIFDGPHSIRHKFPINILPKDDSPPFLISNVVIEVHEGQMILIE
GSMLHASDMDSSDDYILFNITKPPQAGEIMKKPGPNLIGYSVSSFLQRDLFNGIIYYHHL
GGEVFEDSLEFVLCDSHDPPNLSEPQVMVVHIIPVDDQLPREAPGVTRHLVVKETEIAHL
TKKHLHFIDVEEQDRELTYTITTSPFFSCTHGHSDAGKLFMVDTIPKLVKDPTALALRSF
TQHAVNYMKVAYMPPLQDIGPEPQQVQFIFSVSNQHGGTLYGICFNITILPVDNQAPEVF
TSHLRVEEGGLSHVTDGHILISDVDTKREHLLLLLRRQPQHGVVELDGIPMNEGDRLSCG
DLRTLAIRYRHDGSETLTDDVLFAATDGIHFVEFTLQVKVLPVNDEPPVMRTGLVPVLQC
LEGEEVVLSSEYIYATDADSDDMKLMFMLAQQPYHGIVRKAGIAVDRFSQADVIAGLVTY
KHTGGEIGLTPSIEILTFIVSDGEAGLDVKDCCYDGPLPPPVPLHDPFPVYDLNITIFPV
DNQPPSIATGARFVVEEGSSAALTTNHLFATDPDTTADDLEFVLVSPPQFGYIENVLPSP
GFEKSNIGISVASFKLKHLKALNINYVQARHMRMEPTADHFVLYVTDGLHRSAETPFFVL
IKPINDEVPEFIARNITVQEGAMKELDLSVINAVDLDVPQDHLVFGVVQRPWHGFLINGV
HGNDILHYKQLINHDHHSHGLLVHDFSMELLKNGMKLMYMHDNSENLTDSFTIQLSDGKH
KVLRTISVKVIPVNDEKPVLSKKDDIEVNMGETRIISSAVLSAEDKDTPRERIYYLFERI
PENGQLQLKVGQGWMTLQTGMKCTQEELDMNLLRYVHTGAIGSKNQDSFTFYLWDGYNRS
PAVDFYINIKDMEKGDIAVFRKPLTVTKGDRGYITTNVLLALDGTDKPEELLYVITSPPQ
YGQIEYVSYPGIPITSFSQMDVARQIVCYVHNTKAVVPEDTFRFIISNGLRTKHGTFMIS
LEPVDQALPTLSRNTGLRLVEGAMALLSPDVLQLSDPDTAKENLTFLLAQLPQYGHLYYR
GAVLLQYNFTQQDVDNRDVAYKHGGGDSQIDRFTFVATDRTNQGFIVNGRVQSEPVAFTI
QVDHLDKMAPKIIHLRCFSDVELLKNGNYGIYITARSLKASDPNTEDDKIFFKILRGPHY
GYLENITTGGFIQEGFSQKDLNSKIILYVINPSQEVNSDNLEFQVTDDSGNSAVPQRLEL
RWSRIEMQQTEYEVCENVGVVSLKITRAGHSAESAFIAVKVNEISAMLGKDFTVTPSKLV
QFDPGMDQCSE
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttttgagaaaatcttgttttttctactgctgcctgttctactaagagttgcc
tactcctcctttattagtgtcaaccttggggtgaaagtgatgaagggacagtctgtcttc
ctctcagaagatgacctcaagtttgccatccccagagagaaggatgtctgcaaagtagaa
gttgtgattaatgagccaataacacagagggttgggaaactaactccacaggtttttgac
tgtcacttccttcctaatgaagtcaaatatacccacaatggatgtccgattttagatgaa
gacgtggtcatgcttaggctgtacaggtttaccgaaactgaaacatttgtagaaacattc
accctccatgtgcagttactcgagccagactgtaacatcatcaaaatgcgctcccgtgcc
ctggaggtccctgagtactatggcctgtccagggtgattgacaagaatgtcctcactttt
gactatgacaggaagataaatctggattgcaccatttccatagcctcctcggaaacccac
ctgcctgcttatggccagctcgtcattggggaagtgcagcaagagcagcttcgtggagat
cagccacagagcttcttccccggaccagagcacagcctgggccagccctgcagaaacggg
agctgcatgctgagagtgggagtcattcacaactcaaaaatgagctgcaaagaatttctg
agaatggggattcgatatcagcaccttgaccctccttcgcctgacaccgattatattcct
gtgaggctggatctcacagacagcagaagcaaaactctgcacaagactgagtatgcgtgg
ctccctgttcagattaaaggtgctattcccaatcaaatacccaaagctgtctcaacggca
aagttcatcctggaagtagatcaatttattttaacccccattacaaccacaaccgttgat
gctgaagacaatgaaactccaaagtcccttcttgtattcaacattaccaagccacctcca
caaggcttcatcacccatctatccgaccacacaaagcctgttggctccttcacgtggaaa
gatctcagtgacatgctcattgcttatcagcctccaaataacagctgcacagagaggagg
aattatgaggtggaatttgaggttcatgacttctactttgaaaggagtttaccgattact
gtgcatctttccatcagaacaacggatacaaacgctcctcgggtttcatggaatacaggc
ctcaacctcctggaagggcaatcccgaccaatcacgtggcaacacttccaaattgtagac
aacgatgacatccaaaatgttcgcttggtcacagttgatggcttacagcatgggcggctc
acagttagaggagggaaaggattcatgttcacagtctctgacattcaggctggagttgtt
cactaccatcatgatgacagcgattctactaaggactttgtggtatttaggattttcgat
ggcccccacagtattcgccataagtttccaatcaatatcctccctaaagatgacagccct
ccatttcttatcagcaatgttgtcatcgaagttcatgagggacagatgatcctgattgag
ggctccatgcttcatgcttctgacatggattccagtgatgattacatattattcaatatt
accaagccaccacaggctggagaaatcatgaagaaaccaggaccaaacttgatagggtat
tcggtcagcagttttcttcagagggatctatttaatggaataatttattatcatcatttg
ggaggagaagtatttgaagattcccttgagtttgtgctgtgtgatagccatgaccctccc
aatctttcagagccacaggtgatggtggtgcacattatccctgtggatgaccagctaccc
agagaagccccaggagtgacccgtcatctggttgttaaggagactgagattgctcatcta
actaagaaacatctccacttcatagatgtggaagagcaagacagggaactcacatacacc
ataaccacttccccatttttctcttgcacacacggccactcagatgctgggaagctgttt
atggtggacactatccccaagctggtgaaggatcccactgctcttgcactgcggtcattt
actcagcatgctgtgaactacatgaaagttgcctacatgccaccgctgcaggacatcggg
cctgaacctcagcaagtccagtttattttttccgtcagcaatcagcatggtggcactttg
tacgggatctgcttcaatattacaattcttcctgtggacaatcaagccccagaggttttt
acaagccatttgagagtggaagagggtggcctgagccatgtgacagacggacacattctc
atttccgatgtggacacgaaacgggagcatctcctcctcctcctgcggagacagcctcag
catggtgtggtggagctggatggcattcccatgaatgaaggcgacaggctttcctgtggg
gacctgcgtaccctggccatcaggtatcggcatgatggttctgagactctcactgatgat
gtcctctttgcagccacagatggcatccattttgtagagttcaccctgcaggtcaaggtg
ttgcctgtgaatgacgagccacctgttatgcgaacgggccttgttcctgtgctccagtgc
ctggagggtgaagaagtggtcctctcctcggagtacatttatgccacagatgctgacagt
gatgacatgaaactgatgtttatgctggctcaacagccctaccacgggatagtgaggaaa
gctggcattgctgtggatcgtttctcccaagctgatgtcattgctggtttagttacatat
aagcacactggtggggagattggcctgactccttccattgagatcttaaccttcattgtc
tctgatggtgaggctggcctagatgtgaaagactgctgttatgatggacctcttcctcct
ccagttccgcttcatgatccatttccagtatatgatcttaacatcactatatttcctgtg
gacaaccagcctccatcaattgcaactggtgcaaggtttgtggtggaggagggctcctca
gcagccctgaccaccaaccatttgtttgccactgatcctgacaccactgcagatgactta
gagtttgtcttggtttctcctccccagtttggttacattgaaaatgtattgccttctcct
gggtttgagaagagcaacattggtataagtgtcgcttcgtttaagctgaagcacctgaaa
gccctgaacataaactatgtacaagccaggcacatgcgaatggagccaacagcagaccac
tttgtactttatgtcaccgatgggctgcatcgctcagcagagactccatttttcgtgctg
atcaagccaatcaatgatgaagtcccagaattcatagcaaggaatattaccgttcaagag
ggggcaatgaaagagctggatctctctgttatcaacgcagttgatctggatgtgcctcaa
gaccatttggtatttggggttgtgcagagaccctggcatggattccttattaatggagtt
catggcaatgatattctacactataaacagttaattaaccacgaccaccacagccacggg
ttgcttgttcatgacttttccatggagctactgaagaacggaatgaagctgatgtacatg
cacgacaattcggaaaacctcactgacagcttcacaatccagctatcagatgggaaacat
aaagtcctcagaaccatttcagtaaaggtcattccagtgaatgatgagaaaccagtgctg
agcaagaaagatgatatagaggtgaacatgggagaaactcgaatcatttccagtgctgtt
ctgtcagcagaagataaagatacccccagggagagaatttactacttatttgaaagaatc
ccagaaaatggtcagcttcagctcaaggtaggccaaggctggatgaccctccaaactgga
atgaagtgcactcaggaagaactggatatgaaccttctgagatacgtccatacaggagct
ataggatccaagaaccaagacagcttcacattttatctgtgggatgggtacaacagatcc
ccagctgtggacttctacataaatatcaaggacatggaaaagggagacattgctgttttc
agaaaacctcttaccgtgacaaaaggggatcggggctacattacaaccaatgtcctcctt
gcattggatggtactgacaagccagaggagctcctctacgtgataacctccccaccccag
tacgggcaaatagagtatgtcagctatcctggcatccccattacgagctttagtcaaatg
gatgtagcaagacagatagtctgctatgttcacaacactaaggcagttgttcctgaagat
acattcagattcatcatcagcaatggactgaggactaagcatggaacattcatgatctcc
ttggagccagtcgaccaagctttgcccacactatctaggaacacagggttaagattagtg
gaaggcgctatggcactcctttctcctgatgtcctgcagctttcagacccagacactgcc
aaagaaaaccttaccttcctcttggctcagctgccccagtacggtcatctctattatcga
ggggctgtgctactgcagtacaatttcacccagcaagatgtggacaacagggatgttgcg
tacaagcatggaggtggggattcccagattgacagatttacatttgttgcaacagatagg
actaatcaaggcttcatcgtgaatgggagggtgcagagcgagccagtggcattcaccatt
caggtggatcatttggacaaaatggcaccaaaaatcatccatctccgttgtttttctgat
gtggaactgctgaagaatggcaattatgggatctatattactgccaggtccctgaaggca
tctgaccccaatacagaagatgacaaaatattttttaagattttacgaggtcctcattat
ggctacctggaaaatataacaacaggtggatttattcaggaagggtttagccaaaaggat
ttaaacagcaaaatcatactttatgtcatcaatccatcgcaggaggtgaattcagacaac
ttggagtttcaagtcacagatgacagtgggaactctgcggtgccccaaaggctggagcta
cggtggtctcggattgaaatgcaacagactgagtatgaagtgtgtgagaacgtgggagtg
gtgtctctgaaaatcaccagggcaggacattccgcggagtccgcctttatcgccgtgaag
gtcaatgaaatatctgctatgctgggaaaggactttacagtgactccctccaagcttgta
cagtttgacccaggtatggaccagtgcagtgaataa
DBGET
integrated database retrieval system
