Charadrius vociferus (killdeer): 104292271
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Entry
104292271 CDS
T08577
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
cvf
Charadrius vociferus (killdeer)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1q
Collagen
BclA_C
Motif
Other DBs
NCBI-GeneID:
104292271
NCBI-ProteinID:
XP_009889922
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MAVLLIPVQLLAVAVTIYLELVRSTQGGVYYGIKQLPPQVPQYQPLGQQVPHMPLGKEGI
PMQHMGKEMPHMQYGKAYPHLPQYMKEVPQMPLLGKDMAPKKEKEMPMRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EIGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGAPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGAPG
IQGPPGLPGVGKPGQDGVPGQPGFPGGKGEQGLPGLPGAAGLQGPPGKPGALGPPGQPGL
QGPPGPPGPPGPPVIIPPTPPAVGQYLPEVGPIDGVKPPYGYKGKKGKAGGAVYEMPAFT
AELLTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGVYYFAYHVHCKGASVWVALF
KNNEPLMYTYDEYKKGFLDQASGSAVVQLMPGDKVYVQMPSEQAAGLYAGQYVHSSFSGY
LLYPM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgttgctcatccctgtgcagctgctggcagtggctgtcaccatttacctagag
ctggtgaggtctactcaaggaggtgtctactatgggatcaagcagctaccaccccaggtg
ccccagtaccaacccctcggacaacaagtacctcacatgccgctgggcaaagaaggcatc
ccgatgcagcacatgggaaaggagatgccccacatgcagtacgggaaagcgtacccccat
ctgcctcagtacatgaaggaggtcccgcagatgcctctgctcggcaaggacatggctcct
aagaaagagaaagaaatgcccatgcgcagtctgaggggtgagcaaggtccccccggtgag
cctggaccaagagggccaccagggccaccaggattaccaggtcacggtgtgccaggagcc
aaaggaaaaccaggcccgcaaggatatccaggaattgggaagccgggtttgccggggatg
ccggggaaaccaggtgtcatggggcccccggggccgagaggggagatggggccaaagggg
gagattgggcccatggggatacctgggcctcaaggaccgccggggcctcacggccttcct
ggcataggcaaagcaggtgctccagggctgcagggacagccgggaccgaagggcgagcct
gggatgaagggtcccccgggagcccccgggatcccagggccaaaaggggagaagggcgtt
gggatcccgggtttgccggggctgaagggtccgcctgggctgcccggtccccctggcccc
gtggggctgccgggggtcggcaagccgggcatggtcggcttccccggcccgcagggaccc
ctgggcaaacccggacccccaggagaactggggctgcagggacccccgggggcccccggg
atccaaggccctcccggcctgcccggcgttggcaaaccaggccaggacggcgtcccaggc
cagccaggcttcccgggtggcaaaggggagcaaggcctgccaggcttacccggcgccgcg
gggctgcagggacccccggggaaacctggggcgctcggtccccctggacagccaggactt
caggggccgcccggcccacccgggcccccaggtcccccggtcatcatcccacccactccg
ccggccgtgggacagtacctgcccgaggtggggccaatagacggcgtcaagcccccctac
ggctacaagggcaagaaaggcaaggctggcggcgccgtctacgagatgcccgcattcacg
gcggagcttctcacccccttcccccgggtcggggtgcccgtgaagttcgacaaactcctc
tacaacggccggcagaactacaacccccagacagggatcttcacctgcgagatccctggc
gtctactacttcgcctaccacgtccactgtaaaggggccagcgtctgggtggcgttgttc
aagaacaacgagccactgatgtacacctacgacgagtacaagaagggcttcctggaccag
gcttcgggcagcgccgtcgtccagctgatgcccggagacaaggtttacgttcaaatgcca
tccgagcaggcggcaggactctatgccgggcagtacgttcattcatctttttcaggatat
ttattgtatcccatgtaa
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