Charadrius vociferus (killdeer): 104292601
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Entry
104292601 CDS
T08577
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03022
Basal transcription factors
cvf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104292601 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
104292601 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvf03021
]
104292601 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104292601 (GTF2H1)
Transcription machinery [BR:
cvf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104292601 (GTF2H1)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104292601 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
104292601
NCBI-ProteinID:
XP_009890308
UniProt:
A0A0A0AY41
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPMKKVKLQESIEY
EDLEKNNSVKTIALNLKSDRYYHGPTPIQSQQYATSQDIINSFHSIRQEMESYVPKLTQV
LSSGDATSTIAVLSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGELLRHFWSCFPV
NTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKFHTWQS
RRMLKKT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtcatccgaagaagtgttactgattgtaaagaaggtacgtcagaagaagcag
gatggagctctctaccttatggctgaaaggatagcatgggcacctgaaggcaaagaccga
ttcacagtcagccatatgtatgccgacataaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagcttcagctagtattgcatgcaggggacacaaccaactttcacttctcc
aatgaaagcacagcagtgaaggagcgagatgcagtaaaggatcttcttcaacaactgttg
cccaagttcaaaaggaaagccaataaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagtctgaatgcaggggataattctgcagcacctagtaag
caggatgtgggcatttctgcagcatttctggctgatgtacggcctcaaacagatggctgc
aatggtctgaggtataacttgacttcagatatcattgaatccatatttcgaacatatcct
gcagtaaaaatgaaatatgcagaaaatgttccacataacatgaccgagagggaattctgg
acgcgattttttcagtctcattatttccatcgggacaggctcaacacaggctcaaaggac
ctctttgcggaatgtgccaaactggatgaaaaagggttaaaagcaatggtgtctcaagga
gtgaaaaaccctctgatagatttaacagctttggaagataaaacgctagatgaaggctat
ggtgttgcttctgtggcctctacatcaaatgcctcaaaatccgctagagaaagtagcaat
gctgccattataaaacgctttaatcatcatagtgccatggtccttgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcagccaccaatgaaaaaggtgaagctgcaggagtccattgaatat
gaagatttagaaaagaataatagcgttaaaactattgcactaaacttaaagtctgatagg
tattatcatggtccaactccaattcaatcacagcaatatgcaaccagtcaggatataatt
aattcttttcatagtattaggcaagaaatggaatcatatgtacccaaactaactcaggtt
ctttcaagtggtgatgctactagcactattgcagtcctgtcacctggaggagcacttatg
cagggtggaacacagcaagccataaaccagatggtgccaaatgacgttcagtctgaacta
aaacacttgtatgtggcagtgggggaactgctacgacacttctggtcctgctttcctgtt
aacacgccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagatttcag
gttacaaagctctgcccattccaagaaaagattcggagacagtatttaagcacaaatttg
gtaagtcatatagaagagatgctgcagacggcctacaataagttccatacgtggcagtcc
cggcgtatgctgaagaagacgtga
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